CF417162

Overview
NameCF417162
Unique NameCF417162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:682..1389. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.154e-33
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  +
Sbjct:  197 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGL 317

HSP 2 Score: 43.1282 bits (100), Expect = 3.154e-33
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEVI  DYVNTALERL K DVRYRF
Sbjct:  321 IEVIKMDYVNTALERLEKNDVRYRF 345
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.154e-33
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D I DT+  VHPL P + LLK  GKL+L G    PL+  +  +++GRK + GS IG MKET+EM++F  +  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGL 318

HSP 2 Score: 43.1282 bits (100), Expect = 3.154e-33
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEVI  DYVNTALERL K DVRYRF
Sbjct:  322 IEVIKMDYVNTALERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.350e-33
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKA G+ VTVIS+S  KK EA+E LGAD++LVS+D ++M  A  ++D I+DT+   HPL P + LLK+ GKLV++G   +PL      L++GR+ + GS IG M+ETQE +DF A+  +
Sbjct:  198 KIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKV 318

HSP 2 Score: 41.2022 bits (95), Expect = 5.350e-33
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DY+NTA+ERL K DVRYRF
Sbjct:  322 IEVVGLDYINTAMERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.399e-32
Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K+ EA+E LGAD +LVS D D+MQ A  ++D IIDTV   HPL   + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKET+EM+DF  +  +
Sbjct:  198 KIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGV 318

HSP 2 Score: 38.891 bits (89), Expect = 3.399e-32
Identity = 16/25 (64.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IE++  DY+NTA+ERL K DV YRF
Sbjct:  322 IEIVKMDYINTAMERLEKNDVSYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.159e-31
Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K++EA++ LGAD +LVS D   MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+  +  +++GRK + GS IG MKE  EM++F  + ++
Sbjct:  198 KIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDL 318

HSP 2 Score: 40.4318 bits (93), Expect = 2.159e-31
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IE++  DY+NTA ERL K DVRYRF
Sbjct:  322 IEIVKMDYINTAFERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.940e-30
Identity = 59/115 (51.30%), Postives = 79/115 (68.70%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDF 393
            K AKA+G  VTVIS+S  KK EA+E LGAD++LVS D   MQ A  ++D IIDTV   HPL P + LLK  GKL+L+G    PL+     +++GRK + GS +G +KET+EM++F
Sbjct:  199 KVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEF 313

HSP 2 Score: 38.1206 bits (87), Expect = 3.940e-30
Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IE++  DY+N A ERL K DVRYRF
Sbjct:  323 IEIVTMDYINKAFERLEKNDVRYRF 347
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.941e-30
Identity = 55/121 (45.45%), Postives = 79/121 (65.29%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K+ EA++ LGAD +++  DQ +M     ++D +IDTV   H L P + LLK  GKL+L+G    PL+     L++GRK++ GS IG MKET+EM++F  +  +
Sbjct:  198 KIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGL 318

HSP 2 Score: 41.2022 bits (95), Expect = 3.941e-30
Identity = 19/25 (76.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DYVNTA ERL K DVRYRF
Sbjct:  322 IEVVKMDYVNTAFERLEKNDVRYRF 346
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.132e-30
Identity = 56/121 (46.28%), Postives = 81/121 (66.94%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  K++EA+E LGAD++LVS D++ M+ A  ++D + DT+  VHPL P + LLK  GKL+L G    PL+    S ++  + + GS IG MKET+EM++F  +  +
Sbjct:  198 KIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQF--ISPMVMLESITGSFIGSMKETEEMLEFCKEKGL 316

HSP 2 Score: 43.1282 bits (100), Expect = 5.132e-30
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEVI  DYVNTALERL K DVRYRF
Sbjct:  320 IEVIKMDYVNTALERLEKNDVRYRF 344
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.679e-30
Identity = 58/115 (50.43%), Postives = 82/115 (71.30%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDF 393
            K AK+MG  VTVIS+S  K++EA++ LGAD +LVS D+ +M AAM ++D IIDTV   HPL P + LLK  GKLVL+G   +PL   +  +++GRK + GS IG ++ET+E++ F
Sbjct:  199 KVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRF 313

HSP 2 Score: 38.1206 bits (87), Expect = 6.679e-30
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IEV+  DY+N ALERL + DVRYRF
Sbjct:  323 IEVVKMDYLNQALERLERNDVRYRF 347
[Close]
BLAST of CF417162 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 7.181e-29
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 1 
Query:   49 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 411
            K AKAMG  VTVIS+S  KK EAIE LGAD ++VS D  EMQ    ++D IIDTV   HPL P +  LK  GKL+L+G    PL+     +++GRK++ GS IG +KET+E++ F  +  +
Sbjct:  199 KIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGL 319

HSP 2 Score: 32.7278 bits (73), Expect = 7.181e-29
Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = 2 
Query:  422 IEVIPADYVNTALERLAKADVRYRF 496
            IE +  D +N A ERL K DVRYRF
Sbjct:  323 IETVKIDELNIAFERLRKNDVRYRF 347
The following BLAST results are available for this feature:
BLAST of CF417162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH_EUCBO3.154e-3348.76Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.154e-3348.76Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_PINRA5.350e-3348.76Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH2_TOBAC3.399e-3251.24Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH1_OCIBA2.159e-3148.76Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_MEDSA3.940e-3051.30Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH5_ARATH3.941e-3045.45Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH1_EUCGU5.132e-3046.28Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH_LOLPR6.679e-3050.43Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH4_ARATH7.181e-2948.76Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-092 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B3 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417162 ID=CF417162; Name=CF417162; organism=Citrus sinensis; type=EST; length=710bp
ATGCATGTGGGTGTTGTCGGCTTGGGCGGTCTAGGCCATGTCGCCGTCAA
ATTCGCAAAGGCTATGGGGGTCAAGGTGACTGTGATCAGTACCTCCCCTA
GCAAGAAGAGTGAAGCCATTGAACGTCTTGGCGCTGATTCCTTTTTGGTC
AGTCGTGATCAAGATGAGATGCAGGCTGCCATGGGCACAATGGATGGTAT
TATCGATACAGTATCTGCAGTTCACCCTCTAATGCCGTTGATTGGACTGT
TGAAATCTCAAGGAAAGCTTGTACTTGTTGGTGCACCAGAGAAGCCACTG
GAGCTACCAGCTTTCTCCCTGCTCATGGGGAGGAAGATAGTTGGTGGCAG
CATGATTGGGGGGATGAAGGAGACTCAAGAGATGATTGATTTTGCGGCAA
AACACAACATCAGAGCTGGATATTGAGGTCATACCGGCCGACTATGTGAA
CACAGCCCTGGAGCGCCTTGCTAAAGCCGATGTTAGATATCGCTTTNGTC
ATCGACGTTGCAAACACAATGAAGTCCACCCCTTAAAATTTTCTTCCTTT
TGAGTTGCGCTTAAAATGAGGAATGTGCGTTTATTGTCGAGTCACAACAT
CGTCTAAGTTTTAGATTATGTTAGTCTTTTGTTGTGATTTCAAATCTGTT
TTTGCTTTTTAAGAATAATAATTTGGTGACGTATATTCCATCTGTGTGGA
CAAATTTATG
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