CF417164

Overview
NameCF417164
Unique NameCF417164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 3.592e-11
Identity = 27/81 (33.33%), Postives = 43/81 (53.09%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +  + +E++T  F     +G GGFG V+ G L DG  +AVK L     S   +   + F NE  +++ + H NLV + G+C
Sbjct:  309 YDLKTIEAATCTFSKCNMLGQGGFGEVFKGVLQDGSEIAVKRL-----SKESAQGVQEFQNETSLVAKLQHRNLVGVLGFC 384          

HSP 2 Score: 37.3502 bits (85), Expect = 3.592e-11
Identity = 18/46 (39.13%), Postives = 25/46 (54.35%), Query Frame = 3
Query:  540 TATGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            T  G L W  R  I + TA  + YLH      I+HRD+ +SNI ++
Sbjct:  410 TKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLD 455          

HSP 3 Score: 21.557 bits (44), Expect = 3.592e-11
Identity = 9/30 (30.00%), Postives = 16/30 (53.33%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHL 520
            L+   G   +    +LVY+++PN +L   L
Sbjct:  377 LVGVLGFCMEGEEKILVYEFVPNKSLDQFL 406          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: Y2685_ARATH (Probably inactive receptor-like protein kinase At2g46850 OS=Arabidopsis thaliana GN=At2g46850 PE=2 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 3.593e-11
Identity = 39/137 (28.47%), Postives = 63/137 (45.99%), Query Frame = 1
Query:   46 ILSTVFSLTCLLLAFSIGIAIFRSKRFRSSSETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDG-RIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            IL ++ +L CLL      +   + ++F  S+ T     TT      R       +FTY ELE +T  F   +K+  G  G++Y G L +G R++  K L      C          ++I  LS++ H NL ++ G+C
Sbjct:  296 ILGSLLALFCLLKR---PVTSHKDQQFDISTTT-----TTTNSVSFRKGYNKTRLFTYRELEEATKGFQDSQKLTQGKTGTIYSGNLTNGTRVIVHKVL------CENQIEFMEISSQIDHLSAVLHRNLARIIGFC 418          

HSP 2 Score: 34.6538 bits (78), Expect = 3.593e-11
Identity = 15/41 (36.59%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W  R++I  + A  +  L +   PPI+H +I+S NIF++
Sbjct:  445 LDWCKRVNIVAEVAGLLALLQYENYPPILHTNISSGNIFLD 485          

HSP 3 Score: 22.7126 bits (47), Expect = 3.593e-11
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  473 LLVYDYIPNGTLADHL 520
            L+VY+Y  NG+L D L
Sbjct:  426 LVVYEYPVNGSLGDRL 441          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: IRAK4_HUMAN (Interleukin-1 receptor-associated kinase 4 OS=Homo sapiens GN=IRAK4 PE=1 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 3.654e-11
Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPK------RKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYCS 456
            F++ EL++ TN FD +       K+G+GGFG VY G + +   VAVK L +      +    + F  EI +++   H NLV+L G+ S
Sbjct:  168 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGFSS 253          

HSP 2 Score: 30.4166 bits (67), Expect = 3.654e-11
Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHL 520
            L+   G ++D   L LVY Y+PNG+L D L
Sbjct:  245 LVELLGFSSDGDDLCLVYVYMPNGSLLDRL 274          

HSP 3 Score: 29.6462 bits (65), Expect = 3.654e-11
Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 3
Query:  546 TGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            T  L+W +R  IA   A  + +LH +     +HRDI S+NI ++
Sbjct:  280 TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 320          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 4.426e-11
Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGY 450
            F  + +ES+T+ F  + K+G GGFG VY G L +G  +AVK L     S         F NE+++++ + H NLV+L G+
Sbjct:  327 FDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRL-----SKTSGQGEVEFKNEVVVVAKLQHINLVRLLGF 401          

HSP 2 Score: 29.6462 bits (65), Expect = 4.426e-11
Identity = 15/46 (32.61%), Postives = 23/46 (50.00%), Query Frame = 3
Query:  540 TATGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            T    L W +R +I       + YLH      I+HRD+ +SNI ++
Sbjct:  428 TKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLD 473          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 50.8322 bits (120), Expect = 5.914e-11
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYCS 456
            ++Y EL  +T KF  K ++G G  G+VY G L D R VAVK L       N     + F  E+ ++  I+H NLV++ G+CS
Sbjct:  524 YSYRELVKATRKF--KVELGRGESGTVYKGVLEDDRHVAVKKLE------NVRQGKEVFQAELSVIGRINHMNLVRIWGFCS 597          

HSP 2 Score: 33.8834 bits (76), Expect = 5.914e-11
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W+ R +IAL  A  + YLH   +  ++H D+   NI ++
Sbjct:  627 LDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLD 667          

HSP 3 Score: 22.3274 bits (46), Expect = 5.914e-11
Identity = 11/30 (36.67%), Postives = 18/30 (60.00%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHL 520
            L+   G  ++    LLV +Y+ NG+LA+ L
Sbjct:  589 LVRIWGFCSEGSHRLLVSEYVENGSLANIL 618          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11
Identity = 50/151 (33.11%), Postives = 76/151 (50.33%), Query Frame = 1
Query:   40 IAILSTVFSLTCLLLAFSIGIAIF--RSKRFRSS-----------SETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            + I++ V S+T LLL F   +A+F  R+KR +              +TE+ +P         +A  L   F ++ + ++TN F P  K+G GGFG VY G    G  VAVK L     S       + F NE+++++ + H NLV+L GYC
Sbjct:  431 VIIIAVVVSITALLLLF---VAVFSVRTKRRKKMIGAIPLLNVKRKDTEVTEPLAENGDSITTAGSLQ--FDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPSGVQVAVKRL-----SKTSGQGEREFENEVVVVAKLQHRNLVRLLGYC 571          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 44.669 bits (104), Expect = 9.532e-11
Identity = 19/41 (46.34%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W  R ++AL  A  + YLH+   PPIVHRDI   NI ++
Sbjct:  923 LDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMD 963          

HSP 2 Score: 42.3578 bits (98), Expect = 9.532e-11
Identity = 34/142 (23.94%), Postives = 62/142 (43.66%), Query Frame = 1
Query:   37 RIAILSTVFSLTCLLLAFSIGIAIFRSKRFRSSSE----TELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGY 450
            +I +++ + SL  L++  ++     R ++ R   +    T+ E P+ L                  ++ ++T+  + K  IG G  G VY   L  G++ AVK L    H      + +S   EI  +  + H NL+KL G+
Sbjct:  769 QIVLIAVLSSLLVLVVVLALVFICLRRRKGRPEKDAYVFTQEEGPSLLL----------------NKVLAATDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRLVFASHIR----ANQSMMREIDTIGKVRHRNLIKLEGF 890          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: IRAK1_BOVIN (Interleukin-1 receptor-associated kinase 1 OS=Bos taurus GN=IRAK1 PE=2 SV=2)

HSP 1 Score: 47.7506 bits (112), Expect = 9.650e-11
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 1
Query:  130 SSSETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFST--KSFCNEILILSSIDHPNLVKLHGYCSGS 462
            SS++   E P +L      S+   P      E+   T+ F  + KIG+GGFG VY   +    + AVK L  +    +  ++T  +SF  E+  LS   HPN+V   GYC+ S
Sbjct:  177 SSTKPSPESPMSLLPGAPSSSFCWP----LHEICQGTHDFSEELKIGEGGFGCVYRA-VMRNTVYAVKRLKEE---ADLEWTTVKQSFQTEVQQLSRFRHPNIVDFAGYCAQS 281          

HSP 2 Score: 39.2762 bits (90), Expect = 9.650e-11
Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L+W  RLDI L TA A+++LH    P ++H D+ SSN+ ++
Sbjct:  310 LSWPQRLDILLGTARAIQFLH-QDSPSLIHGDVKSSNVLLD 349          
The following BLAST results are available for this feature:
BLAST of CF417164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CRK33_ARATH3.592e-1133.33Putative cysteine-rich receptor-like protein kinas... [more]
Y2685_ARATH3.593e-1128.47Probably inactive receptor-like protein kinase At2... [more]
IRAK4_HUMAN3.654e-1135.23Interleukin-1 receptor-associated kinase 4 OS=Homo... [more]
CRK18_ARATH4.426e-1137.50Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
KPRO_MAIZE5.914e-1139.02Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
CRK23_ARATH7.954e-1133.11Putative cysteine-rich receptor-like protein kinas... [more]
PEPR1_ARATH9.532e-1146.34Leucine-rich repeat receptor-like protein kinase P... [more]
IRAK1_BOVIN9.650e-1132.74Interleukin-1 receptor-associated kinase 1 OS=Bos ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-094 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B6 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417164 ID=CF417164; Name=CF417164; organism=Citrus sinensis; type=EST; length=678bp
TTGTCACCTCCCTGGATCCACCCAACCAAACTCAATCGCATTGCAATCTT
AAGCACCGTCTTTTCGTTAACATGTTTGCTGCTTGCGTTTTCAATTGGCA
TAGCTATTTTCAGGTCCAAAAGGTTCAGGTCGTCGTCAGAGACAGAATTA
GAAGATCCAACAACTCTGTTTCTTCATCGCCACCGCTCAGCGAGTCTTCT
CCCTCCAGTATTCACCTACGAAGAGCTCGAATCTTCCACTAATAAGTTCG
ACCCGAAGCGCAAAATCGGCGACGGAGGCTTTGGATCCGTTTACTTGGGC
CAACTATTTGACGGCCGAATCGTCGCCGTTAAATACCTTCATAGTAAACA
CCACAGTTGCAACAAATCCTTCTCCACTAAATCCTTCTGCAACGAAATCT
TGATTCTGTCCTCTATTGATCACCCAAATCTTGTTAAGCTTCACGGGTAC
TGCAGCGGATCCTAGAGGTTTGCTTTTGGTCTATGATTACATTCCCAACG
GCACACTTGCTGACCATCTCCACGGCTCAAAGAGCTTGTACCGCGACGGG
GTCGTTGACGTGGCAGGTCAGGCTTGATATCGCTTTGCAAACAGCTTTAG
CCATGGAGTACTTGCATTTCTCTGTCGTGCCTCCGATTGTTCACAGAGAT
ATTACTTCGTCTAACATTTTTGTGGAGA
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