CF417164

Overview
NameCF417164
Unique NameCF417164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 9.190e-18
Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   34 NRIAILSTVFSLTCLLLAFSIGIAIFRSKRFRSS----SETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYCSGS 462
            N++ +L + FS+  +     I    +  +R +S      +T LE  T   L     ++ L   F+++E++ +TN F     IG GG+G+V+ G L DG  VA K    +  +C+      +F +E+ +++SI H NL+ L GYC+ +
Sbjct:  209 NKVKVLVSSFSVLLVASVLVITAWFWYCRRKKSKLLKPRDTSLEAGTQSRLDSMSESTTLVK-FSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFK----RFKNCSAG-GDANFAHEVEVIASIRHVNLLALRGYCTAT 349          

HSP 2 Score: 43.5134 bits (101), Expect = 9.190e-18
Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W +R  IAL  A  + YLH+   P I+HRDI +SNI ++
Sbjct:  381 LAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLD 421          

HSP 3 Score: 24.2534 bits (51), Expect = 9.190e-18
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  473 LLVYDYIPNGTLADHLHG 526
            ++V D + NG+L DHL G
Sbjct:  358 IIVCDLVSNGSLHDHLFG 375          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.122e-17
Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSK-HHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYCS 456
            F Y+++  STN+FDP   IG GG+  VY   L D  I+AVK LH       +K    + F NE+  L+ I H N+VKL G+CS
Sbjct:  839 FKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCS 920          

HSP 2 Score: 43.8986 bits (102), Expect = 1.122e-17
Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            LTW  R+++    A A+ Y+H   + PIVHRDI+S NI ++
Sbjct:  950 LTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLD 990          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.918e-17
Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 1
Query:   49 LSTVFSLTCLLLAFS--IGIAIFRSKRFRSSSETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKS----FCNEILILSSIDHPNLVKLHGYCS 456
            L  + ++T  ++AF   +  A F  K+  +  + E +   +LF+  ++S       F+YE LE +T+ F  K K+G GG GSVY G L +G+ VAVK L          F+TK     F NE+ ++S +DH NLVKL G CS
Sbjct:  259 LGVILAVTSSVVAFVLLVSAAGFLLKKRHAKKQREKKQLGSLFMLANKSNLC----FSYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLF---------FNTKQWVDHFFNEVNLISQVDHKNLVKLLG-CS 386          

HSP 2 Score: 36.965 bits (84), Expect = 1.918e-17
Identity = 20/41 (48.78%), Postives = 22/41 (53.66%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W  R  I L TA  M YLH      I+HRDI  SNI +E
Sbjct:  417 LNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLE 457          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 61.2326 bits (147), Expect = 1.963e-17
Identity = 34/81 (41.98%), Postives = 44/81 (54.32%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            FTY EL  +T+ F+   +IG GG+G VY G L  G +VA+K          K F T     EI +LS + H NLV L G+C
Sbjct:  613 FTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLT-----EIELLSRLHHRNLVSLLGFC 688          

HSP 2 Score: 40.4318 bits (93), Expect = 1.963e-17
Identity = 20/41 (48.78%), Postives = 27/41 (65.85%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L + +RL IAL +A  + YLH    PPI HRDI +SNI ++
Sbjct:  718 LDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLD 758          

HSP 3 Score: 27.7202 bits (60), Expect = 1.963e-17
Identity = 12/30 (40.00%), Postives = 19/30 (63.33%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHL 520
            L+S  G   +    +LVY+Y+ NGTL D++
Sbjct:  681 LVSLLGFCDEEGEQMLVYEYMENGTLRDNI 710          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.487e-17
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  208 VFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +F+ +EL  +T+ F   R +G GG G+VY G L DG IVAVK   SK    +K    + F NEI++LS I+H N+VKL G C
Sbjct:  416 IFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVK--RSKVVDEDK---MEEFINEIVLLSQINHRNIVKLLGCC 492          

HSP 2 Score: 45.0542 bits (105), Expect = 2.487e-17
Identity = 19/42 (45.24%), Postives = 31/42 (73.81%), Query Frame = 3
Query:  552 SLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            ++TW+VRL IA++ A A+ Y+H +   PI HRDI ++NI ++
Sbjct:  522 TMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLD 563          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.516e-17
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1
Query:  208 VFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +FT E+++ +TN +D  R +G GG  +VY G L D  IVA+K      ++       + F NE+L+LS I+H N+VKL G C
Sbjct:   95 IFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNN-----QVEQFINEVLVLSQINHRNVVKLLGCC 171          

HSP 2 Score: 47.7506 bits (112), Expect = 2.516e-17
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  552 SLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            SLTW+ RL+IA++ A A+ YLH     PI+HRDI + NI ++
Sbjct:  201 SLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLD 242          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.199e-17
Identity = 46/152 (30.26%), Postives = 71/152 (46.71%), Query Frame = 1
Query:   40 IAILSTVFSLTCLLLAFSIGIAIFRSKR-------------FRSSSETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYCS 456
            + I+S + +LT + L   + IA+F  +R             + SSS +       LF +    + +      +E++  +T+    +  IG GG G VY  +L +G  VAVK +  K    +   S KSF  E+  L  I H +LVKL GYCS
Sbjct:  875 VVIISAISALTAIGLMILV-IALFFKQRHDFFKKVGHGSTAYTSSSSSSQATHKPLFRNGASKSDI-----RWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKILWK----DDLMSNKSFSREVKTLGRIRHRHLVKLMGYCS 1016          

HSP 2 Score: 51.6026 bits (122), Expect = 3.199e-17
Identity = 23/41 (56.10%), Postives = 29/41 (70.73%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W+ RL IA+  A  +EYLH   VPPIVHRDI SSN+ ++
Sbjct: 1053 LDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLD 1093          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.308e-17
Identity = 43/141 (30.50%), Postives = 57/141 (40.43%), Query Frame = 1
Query:   82 LAFSIGIAIFRSKRFRSSSETELEDPTTLFLHRHRSASL-----------------LPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            L FS+   +F  +R    ++ E+E      L  HR  S                  L     + ++ S+TN FD +  IG GGFG VY   L DG   A+     K            F  EI +LS I H +LV L GYC
Sbjct:  416 LVFSLLFMVFLKRRRSKKTKPEVEGTVWSPLPLHRGGSSDNRPISQYHNSPLRNLHLGLTIPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAI-----KRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYC 551          

HSP 2 Score: 40.0466 bits (92), Expect = 3.308e-17
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 3
Query:  552 SLTWQVRLDIALQTALAMEYLHFS-VVPPIVHRDITSSNIFVE 677
            SLTW+ RL+I +  A  ++YLH S     I+HRD+ S+NI ++
Sbjct:  580 SLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLD 622          

HSP 3 Score: 34.6538 bits (78), Expect = 3.308e-17
Identity = 14/33 (42.42%), Postives = 23/33 (69.70%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHLHGS 529
            L+S TG   +   ++LVY+++  GTL +HL+GS
Sbjct:  544 LVSLTGYCEENSEMILVYEFMEKGTLKEHLYGS 576          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 4.202e-17
Identity = 46/145 (31.72%), Postives = 70/145 (48.28%), Query Frame = 1
Query:   28 KLNRIAILSTVFSLTCLLLAFSIGIAIFRSKRFRSSSETELEDPTTLFLHRHRSASLLP---PVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            K  RI ++  +  L  LL A  I  A  + K  +   +   ++   + + R   A L      +FT E ++ +TN +D  R +G GG G+VY G L D  IVA+K           S     F +E+L+LS I+H N+VK+ G C
Sbjct:  339 KRTRIFLVIIIGVLVLLLAAICIQHATKQRKYTKLRRQFFEQNGGGMLIQRLSGAGLSNIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKAR-----LADSRQVDQFIHEVLVLSQINHRNVVKILGCC 478          

HSP 2 Score: 46.9802 bits (110), Expect = 4.202e-17
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  552 SLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            SLTW+ RL IA++ A  + YLH S   PI+HRDI ++NI ++
Sbjct:  508 SLTWEHRLRIAIEVAGTLAYLHSSASIPIIHRDIKTANILLD 549          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 5.455e-17
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  208 VFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +F+  ELE +T+ F   R +G GG G+VY G L DGR VAVK   SK    +K    + F NE++ILS I+H ++VKL G C
Sbjct:  438 IFSSRELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVK--KSKVVDEDK---LEEFINEVVILSQINHRHVVKLLGCC 514          

HSP 2 Score: 43.5134 bits (101), Expect = 5.455e-17
Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = 3
Query:  558 TWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            TW +RL IA+  A A+ YLH +   PI HRDI S+NI ++
Sbjct:  546 TWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLD 585          
The following BLAST results are available for this feature:
BLAST of CF417164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
RKF3_ARATH9.190e-1829.25Probable LRR receptor-like serine/threonine-protei... [more]
Y1571_ARATH1.122e-1743.37Probable leucine-rich repeat receptor-like protein... [more]
CRK3_ARATH1.918e-1736.62Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y1684_ARATH1.963e-1741.98Probable LRR receptor-like serine/threonine-protei... [more]
WAKLA_ARATH2.487e-1746.34Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLS_ARATH2.516e-1740.24Putative wall-associated receptor kinase-like 16 O... [more]
GSO1_ARATH3.199e-1730.26LRR receptor-like serine/threonine-protein kinase ... [more]
Y2232_ARATH3.308e-1730.50Probable receptor-like protein kinase At2g23200 OS... [more]
WAK3_ARATH4.202e-1731.72Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
WAKLK_ARATH5.455e-1746.34Putative wall-associated receptor kinase-like 11 O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-094 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B6 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417164 ID=CF417164; Name=CF417164; organism=Citrus sinensis; type=EST; length=678bp
TTGTCACCTCCCTGGATCCACCCAACCAAACTCAATCGCATTGCAATCTT
AAGCACCGTCTTTTCGTTAACATGTTTGCTGCTTGCGTTTTCAATTGGCA
TAGCTATTTTCAGGTCCAAAAGGTTCAGGTCGTCGTCAGAGACAGAATTA
GAAGATCCAACAACTCTGTTTCTTCATCGCCACCGCTCAGCGAGTCTTCT
CCCTCCAGTATTCACCTACGAAGAGCTCGAATCTTCCACTAATAAGTTCG
ACCCGAAGCGCAAAATCGGCGACGGAGGCTTTGGATCCGTTTACTTGGGC
CAACTATTTGACGGCCGAATCGTCGCCGTTAAATACCTTCATAGTAAACA
CCACAGTTGCAACAAATCCTTCTCCACTAAATCCTTCTGCAACGAAATCT
TGATTCTGTCCTCTATTGATCACCCAAATCTTGTTAAGCTTCACGGGTAC
TGCAGCGGATCCTAGAGGTTTGCTTTTGGTCTATGATTACATTCCCAACG
GCACACTTGCTGACCATCTCCACGGCTCAAAGAGCTTGTACCGCGACGGG
GTCGTTGACGTGGCAGGTCAGGCTTGATATCGCTTTGCAAACAGCTTTAG
CCATGGAGTACTTGCATTTCTCTGTCGTGCCTCCGATTGTTCACAGAGAT
ATTACTTCGTCTAACATTTTTGTGGAGA
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