CF417164

Overview
NameCF417164
Unique NameCF417164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.563e-16
Identity = 53/150 (35.33%), Postives = 77/150 (51.33%), Query Frame = 1
Query:   34 NRIAILSTVFSLTCLLLAFSIGIAIF-------RSKRFRSSSETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHG-YCSG 459
            +R +++  V S+   ++ F IG+A+          KR R  S+   +   TL     + +SL    F Y  LE +T  FD   K+G GGFG+VY G L DGR +AVK L       N       F NE+ ++S+++H NLV+L G  CSG
Sbjct:  255 SRGSVVVIVVSVLSSVVVFMIGVAVSVYICKRRTIKRKRRGSKDVEKMAKTL-----KDSSLN---FKYSTLEKATGSFDNANKLGQGGFGTVYKGVLPDGRDIAVKRLF-----FNNRHRATDFYNEVNMISTVEHKNLVRLLGCSCSG 391          

HSP 2 Score: 36.965 bits (84), Expect = 1.563e-16
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 3
Query:  552 SLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            +L WQ R  I + TA  + YLH      I+HRDI +SNI ++
Sbjct:  418 TLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLD 459          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 2.016e-16
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1
Query:  118 KRFRSSSETELEDPTTLFLHRHRSASLLPPVFT---YEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +  ++  +  L +   L  H   S   LP  FT   + E+E +TN FD   KIG+GG+GS+Y+G L   + VA+K L+      N S     +  E+ +LS + HPN++ L G C
Sbjct:  435 EELQTERDRALREAEELRSHAETSTLQLPQYFTDFSFSEIEEATNHFDSTLKIGEGGYGSIYVGLLRHTQ-VAIKMLNP-----NSSQGPVEYQQEVDVLSKMRHPNIITLIGAC 543          

HSP 2 Score: 33.113 bits (74), Expect = 2.016e-16
Identity = 14/41 (34.15%), Postives = 25/41 (60.98%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L+WQ R+ IA +   A+ +LH +    +VH D+  +NI ++
Sbjct:  572 LSWQNRVRIATEICAALVFLHSNKAHSLVHGDLKPANILLD 612          

HSP 3 Score: 28.8758 bits (63), Expect = 2.016e-16
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 2
Query:  455 ADPRGLLLVYDYIPNGTLADHL 520
            A P G  LVY+Y+P G+L D L
Sbjct:  542 ACPEGWSLVYEYLPGGSLEDRL 563          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 2.027e-16
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = 1
Query:  208 VFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +FT + ++ +TN +   R +G GG G+VY G L D  IVA+K    K    N+S   + F NE+L+LS I+H N+VK+ G C
Sbjct:  391 IFTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIK----KARLGNRS-QVEQFINEVLVLSQINHRNVVKVLGCC 467          

HSP 2 Score: 46.2098 bits (108), Expect = 2.027e-16
Identity = 21/42 (50.00%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  552 SLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            SLTW+ RL IA + A ++ YLH S   PI+HRDI ++NI ++
Sbjct:  497 SLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLD 538          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.612e-16
Identity = 32/81 (39.51%), Postives = 45/81 (55.56%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            FTY ++  +T+ F  +R +G GG+G+VY G L DGR VAVK L  +     K F  +             HPNLV+L+G+C
Sbjct:  802 FTYADILKATSNFSEERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWC 882          

HSP 2 Score: 42.743 bits (99), Expect = 2.612e-16
Identity = 17/41 (41.46%), Postives = 26/41 (63.41%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            L W+ R+DIA   A  + +LH    P IVHRD+ +SN+ ++
Sbjct:  910 LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLD 950          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.632e-16
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  208 VFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            +F+  ELE +T+ F+  R IG GG G+VY G L DGR VAVK    K +  ++    + F NE++ILS I+H ++VKL G C
Sbjct:  441 LFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVK----KSNVVDED-KLQEFINEVIILSQINHRHVVKLLGCC 517          

HSP 2 Score: 40.4318 bits (93), Expect = 2.632e-16
Identity = 18/39 (46.15%), Postives = 25/39 (64.10%), Query Frame = 3
Query:  561 WQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            W VR+ IA+  + A  YLH +   PI HRDI S+NI ++
Sbjct:  550 WGVRMRIAVDISGAFSYLHTAACSPIYHRDIKSTNILLD 588          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.637e-16
Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 1
Query:   91 SIGIAIFRSKRFRSSSETELEDPTTLFLHRHRSASLLPPV-FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYCS 456
            S G+  + S R  S ++TE  +     L+  R+ S    V F   +L+S+T  F P   +G+G  G VY  +  DGR +AVK + S      KS   +     ++ LS I H N+ +L GYCS
Sbjct:  355 SKGLKHYVSSRVMSFTDTEFANK----LNAKRTTSTRSAVEFELSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKS---EGITPIVMSLSKIRHQNIAELVGYCS 470          

HSP 2 Score: 46.9802 bits (110), Expect = 2.637e-16
Identity = 21/41 (51.22%), Postives = 30/41 (73.17%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            LTW  R+ IAL TA A+EYLH +  P ++H++I SSNI ++
Sbjct:  501 LTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLD 541          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 50.447 bits (119), Expect = 2.707e-16
Identity = 28/83 (33.73%), Postives = 42/83 (50.60%), Query Frame = 1
Query:  205 PVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            P    +EL+  T+ F  K  IG+G +G VY G L  GR  A+K L S           + F  ++ ++S +   N+V+L GYC
Sbjct:   54 PSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQ------PDREFLAQVSMVSRLKDENVVELLGYC 130          

HSP 2 Score: 43.5134 bits (101), Expect = 2.707e-16
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 3
Query:  555 LTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFV 674
            L+W  R+ IA+  A  +EYLH    P I+HRDI SSNI +
Sbjct:  167 LSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILL 206          

HSP 3 Score: 31.5722 bits (70), Expect = 2.707e-16
Identity = 14/36 (38.89%), Postives = 20/36 (55.56%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHLHGSKSL 538
            ++   G   D    +L Y+Y PNG+L D LHG K +
Sbjct:  123 VVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGV 158          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 3.354e-16
Identity = 23/43 (53.49%), Postives = 27/43 (62.79%), Query Frame = 3
Query:  549 GSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            G L WQ R  I L  A  + YLH   VPPIVHRDI S+NI ++
Sbjct:  782 GMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILID 824          

HSP 2 Score: 39.6614 bits (91), Expect = 3.354e-16
Identity = 41/153 (26.80%), Postives = 63/153 (41.18%), Query Frame = 1
Query:   28 KLNRIAILSTVFSLTCLLLAFSIGIAIFRSKRFRSSSETELEDPTTLFLHRHRSASLLPPVFTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHS----KHHSCNKSFSTK------SFCNEILILSSIDHPNLVKLHGYCS 456
            K   + +L ++F L  ++L   +    F+ + F+ +   E    T +  H+   +        +E LES     D    IG G  G VY   L +G  VAVK L +    +   C+     K      +F  E+  L  I H N+VKL   CS
Sbjct:  614 KRGYVWLLRSIFVLAAMVLLAGVAWFYFKYRTFKKARAMERSKWTLMSFHKLGFSE-------HEILES----LDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCS 755          

HSP 3 Score: 34.2686 bits (77), Expect = 3.354e-16
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 2
Query:  473 LLVYDYIPNGTLADHLHGSK 532
            LLVY+Y+PNG+L D LH SK
Sbjct:  761 LLVYEYMPNGSLGDLLHSSK 780          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.368e-16
Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 1
Query:   76 LLLAFSIGIAIFRSKRFR-------SSSETELEDPTTLFLHRHRS-----------ASLLPPV----FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRI-VAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            ++LA  IG  +F + R R       +S  T    P +L+ + H +           AS LP      F++ E++++T  FD  R +G GGFG VY G++  G   VA+K  +         F T     EI +LS + H +LV L GYC
Sbjct:  457 VVLALIIGFCVFGAYRRRKRGDYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQT-----EIEMLSKLRHRHLVSLIGYC 600          

HSP 2 Score: 40.4318 bits (93), Expect = 3.368e-16
Identity = 17/46 (36.96%), Postives = 27/46 (58.70%), Query Frame = 3
Query:  540 TATGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            T   SL W+ RL+I +  A  + YLH      I+HRD+ ++NI ++
Sbjct:  625 TQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLD 670          

HSP 3 Score: 30.8018 bits (68), Expect = 3.368e-16
Identity = 12/35 (34.29%), Postives = 24/35 (68.57%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHLHGSKS 535
            L+S  G   +   ++LVYDY+ +GT+ +HL+ +++
Sbjct:  593 LVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQN 627          
BLAST of CF417164 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 3.374e-16
Identity = 31/81 (38.27%), Postives = 41/81 (50.62%), Query Frame = 1
Query:  211 FTYEELESSTNKFDPKRKIGDGGFGSVYLGQLFDGRIVAVKYLHSKHHSCNKSFSTKSFCNEILILSSIDHPNLVKLHGYC 453
            F+  E++  T+ FD    IG GGFG VY G +  G  VA+     K  + N       F  EI +LS + H +LV L GYC
Sbjct:  509 FSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAI-----KKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYC 584          

HSP 2 Score: 41.5874 bits (96), Expect = 3.374e-16
Identity = 18/46 (39.13%), Postives = 28/46 (60.87%), Query Frame = 3
Query:  540 TATGSLTWQVRLDIALQTALAMEYLHFSVVPPIVHRDITSSNIFVE 677
            T    LTW+ RL+IA+  A  + YLH      I+HRD+ ++NI ++
Sbjct:  609 TKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLD 654          

HSP 3 Score: 30.4166 bits (67), Expect = 3.374e-16
Identity = 13/34 (38.24%), Postives = 21/34 (61.76%), Query Frame = 2
Query:  431 LLSFTGTAADPRGLLLVYDYIPNGTLADHLHGSK 532
            L+S  G   +   + L+YDY+  GTL +HL+ +K
Sbjct:  577 LVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTK 610          
The following BLAST results are available for this feature:
BLAST of CF417164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
CRK2_ARATH1.563e-1635.33Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
PUB33_ARATH2.016e-1633.91U-box domain-containing protein 33 OS=Arabidopsis ... [more]
WAK2_ARATH2.027e-1641.46Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
Y1743_ARATH2.612e-1639.51Probable LRR receptor-like serine/threonine-protei... [more]
WAKLL_ARATH2.632e-1645.12Putative wall-associated receptor kinase-like 13 O... [more]
SRF5_ARATH2.637e-1633.33Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
PTI1_SOLLC2.707e-1633.73Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
HSL1_ARATH3.354e-1653.49Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
FERON_ARATH3.368e-1631.54Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
ANX2_ARATH3.374e-1638.27Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-094 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_B6 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417164 ID=CF417164; Name=CF417164; organism=Citrus sinensis; type=EST; length=678bp
TTGTCACCTCCCTGGATCCACCCAACCAAACTCAATCGCATTGCAATCTT
AAGCACCGTCTTTTCGTTAACATGTTTGCTGCTTGCGTTTTCAATTGGCA
TAGCTATTTTCAGGTCCAAAAGGTTCAGGTCGTCGTCAGAGACAGAATTA
GAAGATCCAACAACTCTGTTTCTTCATCGCCACCGCTCAGCGAGTCTTCT
CCCTCCAGTATTCACCTACGAAGAGCTCGAATCTTCCACTAATAAGTTCG
ACCCGAAGCGCAAAATCGGCGACGGAGGCTTTGGATCCGTTTACTTGGGC
CAACTATTTGACGGCCGAATCGTCGCCGTTAAATACCTTCATAGTAAACA
CCACAGTTGCAACAAATCCTTCTCCACTAAATCCTTCTGCAACGAAATCT
TGATTCTGTCCTCTATTGATCACCCAAATCTTGTTAAGCTTCACGGGTAC
TGCAGCGGATCCTAGAGGTTTGCTTTTGGTCTATGATTACATTCCCAACG
GCACACTTGCTGACCATCTCCACGGCTCAAAGAGCTTGTACCGCGACGGG
GTCGTTGACGTGGCAGGTCAGGCTTGATATCGCTTTGCAAACAGCTTTAG
CCATGGAGTACTTGCATTTCTCTGTCGTGCCTCCGATTGTTCACAGAGAT
ATTACTTCGTCTAACATTTTTGTGGAGA
back to top