CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_THET2 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21 Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADA 583 VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID ++N +NS I IYVLTQ+ + SL H+ R + G + + F+ ++ AQ P W++GTADA Sbjct: 6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADA 109
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_THECA (Glucose-1-phosphate adenylyltransferase OS=Thermus caldophilus GN=glgC PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21 Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQ---SPENPNWFQGTADA 583 VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID ++N +NS I IYVLTQ+ + SL H+ R + G + + F+ ++ AQ P W++GTADA Sbjct: 6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADA 109
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALTY (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhimurium GN=glgC PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALTI (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhi GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALSV (Glucose-1-phosphate adenylyltransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALPK (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALPC (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi C (strain RKS4594) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALPB (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALPA (Glucose-1-phosphate adenylyltransferase OS=Salmonella paratyphi A GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_SALNS (Glucose-1-phosphate adenylyltransferase OS=Salmonella newport (strain SL254) GN=glgC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21 Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VS KN + L + + +IL GG GTRL LT KRAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S NE FV++L AQQ + NW++GTADA Sbjct: 2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADA 120 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |