CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3) HSP 1 Score: 154.836 bits (390), Expect = 2.395e-44 Identity = 83/163 (50.92%), Postives = 111/163 (68.10%), Query Frame = 2 Query: 119 AFSSSQLSGDKIFSKAVTGDRR------SERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADA 583 +F + +L G K+ + R S++R ++ +SK + + R+V IILGGGAGTRL+PLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY SN G+ +G+VEVLAA Q+P WFQGTADA Sbjct: 32 SFCNGELMGKKLNLSQLPNIRLRSSTNFSQKRILMSLNSVAGESKVQELETEKRDPRTVASIILGGGAGTRLFPLTKRRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNSNGLGF-GDGYVEVLAATQTPGESGKRWFQGTADA 193 HSP 2 Score: 45.4394 bits (106), Expect = 2.395e-44 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLEFLVLAGDHLYRMDYERFIQ 686 VRQ+ WLFE+ ++ + L+L+GDHLYRMDY FIQ Sbjct: 194 VRQFHWLFEDARSKDIEDVLILSGDHLYRMDYMDFIQ 230
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 8.111e-42 Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = 2 Query: 266 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPE--NPNWFQGTADA 583 +R+V+ IILGGGAGTRL+PLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQFNSASLNRH++RAY G G+VEVLAA Q+P WFQGTA A Sbjct: 46 ARTVVAIILGGGAGTRLFPLTKRRAKPAVPMGGAYRLIDVPMSNCINSGINKVYILTQFNSASLNRHIARAYNFGNGVTFESGYVEVLAATQTPGELGKRWFQGTAHA 153 HSP 2 Score: 45.8246 bits (107), Expect = 8.111e-42 Identity = 20/38 (52.63%), Postives = 29/38 (76.32%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLEFLVLAGDHLYRMDYERFIQA 689 VRQ+ WLFE+ ++ + L+L+GDHLYRMDY F+Q+ Sbjct: 154 VRQFHWLFEDARSKDIEDVLILSGDHLYRMDYLHFVQS 191
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.167e-41 Identity = 72/107 (67.29%), Postives = 82/107 (76.64%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQS--PENPNWFQGTADA 583 ++V IILGGGAGTRL+PLT KRAKPAVP+G YRLIDIP+SNC+NS I KI++LTQFNS SLNRHLSR Y G +GFVEVLAA Q+ WFQGTADA Sbjct: 83 KNVASIILGGGAGTRLFPLTSKRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVNFGDGFVEVLAATQTSGDAGKKWFQGTADA 189 HSP 2 Score: 48.1358 bits (113), Expect = 5.167e-41 Identity = 21/37 (56.76%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLEFLVLAGDHLYRMDYERFIQ 686 VRQ++W+FE+ NV L+L+GDHLYRMDY F+Q Sbjct: 190 VRQFIWVFEDAKTKNVEHVLILSGDHLYRMDYMNFVQ 226
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.099e-39 Identity = 76/135 (56.30%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 215 QAVSDSKNSQTCL--DPEAS-RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADACEAVFVA 604 Q+V +S + L P+A ++V I+LGGGAGTRL+PLT +RAKPAVP+G YRLID+P+SNC+NS I KI++LTQFNS SLNRHL+R Y G +GFVEV AA Q+P WFQGTADA F A Sbjct: 66 QSVKESLKYEPALFESPKADPKNVAAIVLGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLARTYNFGDGVNFGDGFVEVFAATQTPGESGKKWFQGTADAVRQFFWA 200 HSP 2 Score: 41.2022 bits (95), Expect = 2.099e-39 Identity = 19/37 (51.35%), Postives = 25/37 (67.57%), Query Frame = 3 Query: 585 VRQYLWLFEEH---NVLEFLVLAGDHLYRMDYERFIQ 686 VRQ+ W FE+ +V ++L+GDHLYRMDY F Q Sbjct: 194 VRQFFWAFEDSKSKDVEHIVILSGDHLYRMDYMSFWQ 230
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.181e-39 Identity = 83/105 (79.05%), Postives = 90/105 (85.71%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + VL IILGGGAGTRLYPLTK RAKPAVPL YRLIDIPVSNC+NS I+KIYVLTQFNSASLNRHLSR Y N G+ N+ FVEVLAAQQ+ ENP+WFQGTADA Sbjct: 2 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEITKIYVLTQFNSASLNRHLSRTY--NFTGF-NDEFVEVLAAQQTAENPSWFQGTADA 103
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL3_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic OS=Arabidopsis thaliana GN=APL3 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 6.048e-39 Identity = 84/163 (51.53%), Postives = 104/163 (63.80%), Query Frame = 2 Query: 128 SSQLSGDKIFSKAVTGDRRSERRPIVVSPQAVSDSKNSQTCLDPEAS---------RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADA 583 SS LS K R + RP V A++ SKN++ L + S ++V IILGGG G +L+PLTK+ A PAVP+G YR+IDIP+SNC+NS I+KI+VLTQFNSASLNRHL+R Y N G +GFVEVLAA Q+P WFQGTADA Sbjct: 41 SSDLSSKKF--------RNRKLRPGVA--YAIATSKNAKEALKNQPSMFERRRADPKNVAAIILGGGDGAKLFPLTKRAATPAVPVGGCYRMIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN-GINFGDGFVEVLAATQTPGEAGKKWFQGTADA 192 HSP 2 Score: 44.2838 bits (103), Expect = 6.048e-39 Identity = 18/37 (48.65%), Postives = 28/37 (75.68%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLEFLVLAGDHLYRMDYERFIQ 686 VR++LW+FE+ N+ ++L+GDHLYRM+Y F+Q Sbjct: 193 VRKFLWVFEDAKNRNIENIIILSGDHLYRMNYMDFVQ 229
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.209e-38 Identity = 81/105 (77.14%), Postives = 90/105 (85.71%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + VL IILGGGAGTRLYPLTK RAKPAVPL YRLIDIPVSNC+N+ I KIYVLTQFNSASLNRHL+R Y N G+ ++GFVEVLAAQQ+ ENP+WFQGTADA Sbjct: 2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINAEILKIYVLTQFNSASLNRHLTRTY--NFTGF-HDGFVEVLAAQQTTENPSWFQGTADA 103
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL4_ARATH (Probable glucose-1-phosphate adenylyltransferase large subunit, chloroplastic OS=Arabidopsis thaliana GN=At2g21590 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.163e-37 Identity = 71/113 (62.83%), Postives = 84/113 (74.34%), Query Frame = 2 Query: 251 LDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADA 583 +DP+ +V IILGGG G +L+PLT + A PAVP+G YRLIDIP+SNC+NS I+KI+VLTQFNSASLNRHL+R Y N G GFVEVLAA Q+P WFQGTADA Sbjct: 86 VDPQ---NVAAIILGGGNGAKLFPLTMRAATPAVPVGGCYRLIDIPMSNCINSCINKIFVLTQFNSASLNRHLARTYFGN-GINFGGGFVEVLAATQTPGEAGKKWFQGTADA 194 HSP 2 Score: 45.4394 bits (106), Expect = 4.163e-37 Identity = 19/38 (50.00%), Postives = 29/38 (76.32%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLEFLVLAGDHLYRMDYERFIQA 689 VR++LW+FE+ N+ L+L+GDHLYRM+Y F+Q+ Sbjct: 195 VRKFLWVFEDAKNRNIENILILSGDHLYRMNYMDFVQS 232
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.200e-36 Identity = 66/107 (61.68%), Postives = 81/107 (75.70%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADA 583 + V +ILGGG GT+L+PLT + A PAVP+G YRLIDIP+SNC+NS I+KI+VLTQ+NSA LNRH++R Y N G +GFVEVLAA Q+P WFQGTADA Sbjct: 36 KDVAAVILGGGEGTKLFPLTSRTATPAVPVGGCYRLIDIPMSNCINSAINKIFVLTQYNSAPLNRHIARTYFGN-GVSFGDGFVEVLAATQTPGEAGKKWFQGTADA 141 HSP 2 Score: 43.5134 bits (101), Expect = 1.200e-36 Identity = 18/37 (48.65%), Postives = 27/37 (72.97%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLEFLVLAGDHLYRMDYERFIQ 686 VR+++W+FE+ N+ +VL+GDHLYRMDY +Q Sbjct: 142 VRKFIWVFEDAKNKNIENIVVLSGDHLYRMDYMELVQ 178
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL2_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.726e-35 Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 2 Query: 128 SSQLSGDKIFSKAVTGDRRSERRPIVVSPQAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPN--WFQGTADACEAVFV 601 ++Q G + +T D E P S Q DP+A V +ILGGG GTRL+PLT +RAKPAVP+G YRLID+P+SNC+NS I KI++LTQFNS SLNRHL+ N G+ +GFVEVLA Q+P + WFQ E ++V Sbjct: 48 TTQQRGRNVTPAVLTRDINKEMLPFEES------MFEEQPTADPKA---VASVILGGGVGTRLFPLTSRRAKPAVPIGGCYRLIDVPMSNCINSGIRKIFILTQFNSFSLNRHLATYNFGNGVGF-GDGFVEVLAGTQTPGDGRKMWFQAADAVREFIWV 197 HSP 2 Score: 43.5134 bits (101), Expect = 3.726e-35 Identity = 18/37 (48.65%), Postives = 27/37 (72.97%), Query Frame = 3 Query: 585 VRQYLWLFEEH---NVLEFLVLAGDHLYRMDYERFIQ 686 VR+++W+FE NV ++L+GDHLYRM+Y F+Q Sbjct: 191 VREFIWVFENQKNKNVEHIIILSGDHLYRMNYMDFVQ 227 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |