CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_STRMU (Glucose-1-phosphate adenylyltransferase OS=Streptococcus mutans GN=glgC PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.147e-18 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +L +IL GG GTRL LT+ AKPAV G YR+ID +SNC NS I+ + ++TQ+ +LN H+ + + G N G +L + E WFQGT+ A Sbjct: 5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGINNVGIITQYQPLALNSHIGNGSSWGLDGI-NSG-ATILQPYSATEGNRWFQGTSHA 105 HSP 2 Score: 30.8018 bits (68), Expect = 1.147e-18 Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFIQ 686 L+L+GDH+Y+MDY+ +Q Sbjct: 122 LILSGDHIYKMDYDDMLQ 139
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_STRU0 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.147e-18 Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +L +IL GG GTRL LT+ AKPAV G YR+ID +SNC NS I + V+TQ+ LN H+ + + G N G V +L + E WF+GT+ A Sbjct: 5 MLALILAGGQGTRLGKLTQNIAKPAVQFGGRYRIIDFALSNCANSGIDNVGVITQYQPLVLNSHIGNGSSWGLEGI-NRG-VTILQPFSATEGNKWFEGTSHA 105 HSP 2 Score: 32.7278 bits (73), Expect = 1.147e-18 Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFIQ 686 L+L+GDH+Y+MDYE +Q Sbjct: 122 LILSGDHIYKMDYEEMLQ 139
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_PROAC (Glucose-1-phosphate adenylyltransferase OS=Propionibacterium acnes GN=glgC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18 Identity = 54/104 (51.92%), Postives = 67/104 (64.42%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 VL I+L GG G RL PLT RAKPAVP G YRLID +SN NS +++I VLTQ+ S SL+RH+S + S M G +V + AQQ P W+QG+ADA Sbjct: 8 VLSIVLAGGEGKRLMPLTMDRAKPAVPFGGTYRLIDFVLSNLANSGLTQIAVLTQYKSHSLDRHISITWRMSTMLG----SYVTPVPAQQR-LGPRWYQGSADA 106
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_LACLS (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=glgC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +LG+IL GG GTRL LTK AKPAVP G YR+ID +SNC NSN+ + V+TQ+ +LN H+ + G N G V +L S E WF+GT+ A Sbjct: 5 MLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALSNCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGI-NSG-VTILQPYSSQEGSKWFEGTSHA 105
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_LACLA (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +LG+IL GG GTRL LTK AKPAVP G YR+ID +SNC NSN+ + V+TQ+ +LN H+ + G N G V +L S E WF+GT+ A Sbjct: 5 MLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALSNCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGI-NSG-VTILQPYSSQEGSKWFEGTSHA 105
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_THEP1 (Glucose-1-phosphate adenylyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgC PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.487e-18 Identity = 42/104 (40.38%), Postives = 65/104 (62.50%), Query Frame = 2 Query: 272 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + + +IL GG GTRL LT++ AKPA+P G YRLID +SNC+NS I ++ VLTQ+ L++H+ ++ + +G VE+L +W++GTA+A Sbjct: 3 NTVAMILAGGQGTRLGVLTERVAKPAIPFGGKYRLIDFTLSNCVNSGIYRVGVLTQYRPHVLSKHIGIGRPWDLD--RKDGGVEILPPYVGRHESDWYKGTANA 104 HSP 2 Score: 29.6462 bits (65), Expect = 1.487e-18 Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFI 683 V Q L EE++ L+L+GDH+Y M+Y I Sbjct: 105 VYQNLEFLEENDAELVLILSGDHVYAMNYNDLI 137
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_FRASN (Glucose-1-phosphate adenylyltransferase OS=Frankia sp. (strain EAN1pec) GN=glgC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.488e-18 Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 266 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY-ASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 S VLG++L GGAG RL PLT RAKPAVP G YRL+D +SN +N +I VLTQ+ S SL+RH++ + SN+ G +V + AQQ P WF G+ADA Sbjct: 3 SPRVLGLVLAGGAGKRLAPLTADRAKPAVPFGGIYRLVDFVLSNLVNGGYLRIAVLTQYKSHSLDRHITTTWRMSNLLG----NYVTPVPAQQR-LGPQWFAGSADA 104 HSP 2 Score: 21.557 bits (44), Expect = 1.488e-18 Identity = 7/17 (41.18%), Postives = 11/17 (64.71%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFI 683 +V DH+YRMD + + Sbjct: 121 VVFGADHVYRMDPRQMV 137
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_STRA5 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype V GN=glgC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.939e-18 Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +L +IL GG GTRL LT+ AKPAV G YR+ID +SNC NS I+ + V+TQ+ LN H+ + + G + V VL + E WFQGT+ A Sbjct: 5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGINNVGVITQYQPLELNTHIGNGSSWGLDGI--DSGVTVLQPYSATEGNRWFQGTSHA 105 HSP 2 Score: 28.8758 bits (63), Expect = 1.939e-18 Identity = 9/18 (50.00%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFIQ 686 L+L+GDH+Y+M+Y+ +Q Sbjct: 122 LILSGDHIYKMNYDDMLQ 139
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_STRA1 (Glucose-1-phosphate adenylyltransferase OS=Streptococcus agalactiae serotype Ia GN=glgC PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.939e-18 Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +L +IL GG GTRL LT+ AKPAV G YR+ID +SNC NS I+ + V+TQ+ LN H+ + + G + V VL + E WFQGT+ A Sbjct: 5 MLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGINNVGVITQYQPLELNTHIGNGSSWGLDGI--DSGVTVLQPYSATEGNRWFQGTSHA 105 HSP 2 Score: 28.8758 bits (63), Expect = 1.939e-18 Identity = 9/18 (50.00%), Postives = 16/18 (88.89%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFIQ 686 L+L+GDH+Y+M+Y+ +Q Sbjct: 122 LILSGDHIYKMNYDDMLQ 139
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_KOCRD (Glucose-1-phosphate adenylyltransferase OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=glgC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.516e-18 Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAY--ASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + VL I+L GG G RL PLT+ RAKPAVP YRLID +SN +NS +I VLTQ+ S SL+RHLS + ++ +G Y V + AQQ +WF G+A+A Sbjct: 5 KKVLAIVLAGGEGKRLMPLTEDRAKPAVPFAGGYRLIDFALSNLVNSGYLQIVVLTQYKSHSLDRHLSETWRLSTQLGNY-----VTSVPAQQR-RGKDWFLGSANA 105 HSP 2 Score: 23.483 bits (49), Expect = 2.516e-18 Identity = 7/18 (38.89%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFIQ 686 +V+ DH+YRMD+ ++ Sbjct: 122 VVVGADHVYRMDFADMVE 139 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |