CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL2_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Zea mays GN=AGP2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 8.233e-35 Identity = 69/106 (65.09%), Postives = 80/106 (75.47%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADA 583 V +ILGGG GT+L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y +GG N +G VEVLAA Q P E WFQGTADA Sbjct: 87 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFQGTADA 189 HSP 2 Score: 38.1206 bits (87), Expect = 8.233e-35 Identity = 17/38 (44.74%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 585 VRQYLWLFEE---HNVLE-FLVLAGDHLYRMDYERFIQ 686 VR+++W+ E+ H +E L+L+GD LYRMDY +Q Sbjct: 190 VRKFIWVLEDYYKHKAIEHILILSGDQLYRMDYMELVQ 227
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL2_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-L PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.819e-34 Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADA 583 V +ILGGG GT+L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y +GG N +G VEVLAA Q P E WF+GTADA Sbjct: 90 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADA 192 HSP 2 Score: 38.5058 bits (88), Expect = 1.819e-34 Identity = 17/45 (37.78%), Postives = 28/45 (62.22%), Query Frame = 3 Query: 564 FRVQLMXVRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQ 686 FR VR+++W+ E++ ++ L+L+GD LYRMDY +Q Sbjct: 186 FRGTADAVRKFIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQ 230
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL1_HORVU (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 1.819e-34 Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADA 583 V +ILGGG GT+L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y +GG N +G VEVLAA Q P E WF+GTADA Sbjct: 91 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADA 193 HSP 2 Score: 38.5058 bits (88), Expect = 1.819e-34 Identity = 17/45 (37.78%), Postives = 28/45 (62.22%), Query Frame = 3 Query: 564 FRVQLMXVRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQ 686 FR VR+++W+ E++ ++ L+L+GD LYRMDY +Q Sbjct: 187 FRGTADAVRKFIWVLEDYYKHKSIEHILILSGDQLYRMDYMELVQ 231
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL3_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Fragment) OS=Triticum aestivum GN=AGA.7 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.963e-33 Identity = 69/114 (60.53%), Postives = 82/114 (71.93%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKN--EGFVEVLAAQQSP-ENPNWFQGTADACEAVFVAL 607 V +ILGGG GT+L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V+TQFNSASLNRH+ R Y +GG N +G VEVLAA Q P E WF+GTADA + L Sbjct: 71 VAAVILGGGTGTQLFPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFVMTQFNSASLNRHIHRTY---LGGGINFTDGSVEVLAATQMPGEAAGWFRGTADAWRKIIWVL 181 HSP 2 Score: 34.6538 bits (78), Expect = 1.963e-33 Identity = 14/37 (37.84%), Postives = 24/37 (64.86%), Query Frame = 3 Query: 588 RQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQ 686 R+ +W+ E++ ++ L+L+GD LYRMDY +Q Sbjct: 175 RKIIWVLEDYYKNKSIEHILILSGDQLYRMDYMELVQ 211
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGL1_MAIZE (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic/amyloplastic OS=Zea mays GN=SH2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.247e-32 Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 2 Query: 146 DKIFSKAVTGDRRSERRPIVVSPQAVSDSKNSQTCLD----PEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYK-NEGFVEVLAAQQSPENP-NWFQGTADA 583 +K G R + +++ A ++ +SQT +A+R V IILGGG G++L+PLT RA PAVP+G YRLIDIP+SNC NS I+KI+V++QFNS SLNRH+ R Y GG +G V+VLAA Q PE P WFQGTAD+ Sbjct: 38 EKALRNRCFGGRVAATTQCILTSDACPETLHSQTQSSRKNYADANR-VSAIILGGGTGSQLFPLTSTRATPAVPVGGCYRLIDIPMSNCFNSGINKIFVMSQFNSTSLNRHIHRTYLE--GGINFADGSVQVLAATQMPEEPAGWFQGTADS 186 HSP 2 Score: 33.8834 bits (76), Expect = 1.247e-32 Identity = 12/38 (31.58%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 585 VRQYLWLFEEH----NVLEFLVLAGDHLYRMDYERFIQ 686 +R+++W+ E++ ++ ++L+GD LYRM+Y +Q Sbjct: 187 IRKFIWVLEDYYSHKSIDNIVILSGDQLYRMNYMELVQ 224
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_THIDA (Glucose-1-phosphate adenylyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.140e-26 Identity = 60/117 (51.28%), Postives = 76/117 (64.96%), Query Frame = 2 Query: 239 SQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPENPNWFQGTADA 583 ++ L E +R L ++L GG G+RL LT RAKPAVP+G YR+ID P+SNC+NS I +I VLTQ+ S SL RHL RA+ G + E FVE+L AQQ W+QGTADA Sbjct: 16 TEPTLVTELTRKTLALVLAGGEGSRLKDLTAWRAKPAVPIGGKYRIIDFPLSNCVNSGIRRIGVLTQYKSHSLIRHLQRAW----GLMRTEVGEFVEILPAQQRTHKKEWYQGTADA 128 HSP 2 Score: 30.4166 bits (67), Expect = 1.140e-26 Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 3 Query: 591 QYLWLFEEHNVLEFLVLAGDHLYRMDYERFI 683 Q L + + H+ LVL GDH+Y MDY + + Sbjct: 131 QNLDIMQRHHPEYVLVLGGDHVYTMDYTQML 161
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_NITEU (Glucose-1-phosphate adenylyltransferase OS=Nitrosomonas europaea GN=glgC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 7.218e-26 Identity = 52/106 (49.06%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 266 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +R+ L +IL GG GTRL LT RAKPAVP G +R+ID +SNC+NS + +I V+TQ+ + SL RH+ R ++ G ++ F+E+L AQQ E W+QGTADA Sbjct: 20 TRNTLALILAGGRGTRLKNLTDWRAKPAVPFGGKFRIIDFTLSNCVNSGVRRIGVVTQYKAQSLIRHIQRGWSFLDGRFQE--FIELLPAQQRTEEGTWYQGTADA 123 HSP 2 Score: 33.4982 bits (75), Expect = 7.218e-26 Identity = 15/33 (45.45%), Postives = 20/33 (60.61%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFI 683 V Q L + HN L+L GDH+Y+MDY R + Sbjct: 124 VFQNLDILRTHNPGYVLILGGDHIYKMDYGRIL 156
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_BURXL (Glucose-1-phosphate adenylyltransferase OS=Burkholderia xenovorans (strain LB400) GN=glgC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.592e-25 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 260 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + R+ L I+L GG GTRL PLT KR KPAV G YR+ID +SNCLNS I +I V+TQ+ + SL RHL R ++ G + F+++ AQQ E +W++GTADA Sbjct: 9 DLQRTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGWSFLRGEFGE--FIDLWPAQQRVEGAHWYRGTADA 114 HSP 2 Score: 31.5722 bits (70), Expect = 1.592e-25 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFI 683 +VLAGDH+Y+MDY R I Sbjct: 131 VVLAGDHIYKMDYTRMI 147
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_BURPP (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=glgC PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.697e-25 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 260 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + R+ L I+L GG GTRL PLT KR KPAV G YR+ID +SNCLNS I +I V+TQ+ + SL RHL R + S + G E F+++ AQQ E +W++GTADA Sbjct: 9 DLQRTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGW-SFLRGEMGE-FIDLWPAQQRVEGAHWYRGTADA 114 HSP 2 Score: 31.5722 bits (70), Expect = 2.697e-25 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFI 683 +VLAGDH+Y+MDY R I Sbjct: 131 VVLAGDHIYKMDYTRMI 147
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_ACIBL (Glucose-1-phosphate adenylyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=glgC PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.947e-25 Identity = 51/102 (50.00%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 278 LGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 LG++L GGAG RLYPLT+ RAKPAV G YR+IDI +SNC+NS + ++Y+LTQ+ + SLNRH+ ++ +G E F+E+L + + NW+ GTADA Sbjct: 5 LGVLLAGGAGERLYPLTRDRAKPAVNFGGIYRIIDITLSNCINSGLRRVYILTQYKALSLNRHIREGWSGIVGNELGE-FIEILPPMKR-VSENWYMGTADA 104 HSP 2 Score: 26.9498 bits (58), Expect = 5.947e-25 Identity = 8/14 (57.14%), Postives = 14/14 (100.00%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYE 674 L+L+GDH+Y+M+Y+ Sbjct: 121 LILSGDHIYKMNYD 134 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |