CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_BACSU (Glucose-1-phosphate adenylyltransferase OS=Bacillus subtilis GN=glgC PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 3.687e-16 Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + + ++L GG G+RL LTK AKPAV G YR+ID +SNC NS I + +LTQ+ LN ++ A ++ Y G V VL W++GTA + Sbjct: 3 KQCVAMLLAGGKGSRLSGLTKNMAKPAVSFGGKYRIIDFTLSNCSNSGIDTVGILTQYQPLELNSYIGIGSAWDLDRY--NGGVTVLPPYAESSEVKWYKGTASS 105 HSP 2 Score: 28.8758 bits (63), Expect = 3.687e-16 Identity = 9/17 (52.94%), Postives = 15/17 (88.24%), Query Frame = 3 Query: 633 LVLAGDHLYRMDYERFI 683 L+L+GDH+Y+MDY + + Sbjct: 122 LILSGDHIYKMDYGKML 138
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_RHOP5 (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisA53) GN=glgC PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16 Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 245 TCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 T ++P +R + +L GG G+RL LT +RAKPAV G R+ID +SN LNS I +I V TQ+ + SL RHL + + +NE F ++L A Q W+ GTADA Sbjct: 3 TGIEPPFARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQHGW-NFFRPERNESF-DILPASQRVSEELWYLGTADA 113
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_RHOPB (Glucose-1-phosphate adenylyltransferase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.464e-15 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 266 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +R + +L GG G+RL LT +RAKPAV G R+ID +SN LNS I +I V TQ+ + SL RHL + + +NE F ++L A Q W+ GTADA Sbjct: 10 ARHAMAYVLAGGRGSRLMELTDRRAKPAVYFGGKSRIIDFALSNALNSGIRRIAVATQYKAHSLIRHLQHGW-NFFRPERNESF-DILPASQRVSEELWYLGTADA 113
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_DESHY (Glucose-1-phosphate adenylyltransferase OS=Desulfitobacterium hafniense (strain Y51) GN=glgC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.164e-14 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + + ++L GG G+RL LT+ KPAV YR+ID +SNC NSNI + VLTQ+ +LN +++ A ++ G + +L +W++GTA+A Sbjct: 4 KECIAMLLAGGQGSRLGCLTRNIPKPAVSFAGKYRIIDFSLSNCSNSNIDTVGVLTQYKPFALNTYINMGSAWDLNCL--NGGIHILPPFVGEAQGSWYKGTANA 106 HSP 2 Score: 28.1054 bits (61), Expect = 3.164e-14 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 615 HNVLEFLVLAGDHLYRMDY 671 +N L+L+GDH+Y+MDY Sbjct: 117 YNPEYILILSGDHIYQMDY 135
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_DESHD (Glucose-1-phosphate adenylyltransferase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.164e-14 Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + + ++L GG G+RL LT+ KPAV YR+ID +SNC NSNI + VLTQ+ +LN +++ A ++ G + +L +W++GTA+A Sbjct: 4 KECIAMLLAGGQGSRLGCLTRNIPKPAVSFAGKYRIIDFSLSNCSNSNIDTVGVLTQYKPFALNTYINMGSAWDLNCL--NGGIHILPPFVGEAQGSWYKGTANA 106 HSP 2 Score: 28.1054 bits (61), Expect = 3.164e-14 Identity = 10/19 (52.63%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 615 HNVLEFLVLAGDHLYRMDY 671 +N L+L+GDH+Y+MDY Sbjct: 117 YNPEYILILSGDHIYQMDY 135
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_FUSNN (Glucose-1-phosphate adenylyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=glgC PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.542e-14 Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQ-QSPENPNWFQGTADA 583 + ++ +IL GG GTRL LT+ AKPAV G YR+ID ++NC NS I + VLTQ+ LN H+ R ++ + +G V VL + + W++GTA+A Sbjct: 6 KRIIAMILAGGQGTRLKELTEDLAKPAVAFGGKYRIIDFTLTNCSNSGIDTVGVLTQYEPRILNNHIGRGSPWDLD--RMDGGVTVLQPHTRKNDEKGWYKGTANA 109
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_CLOD6 (Glucose-1-phosphate adenylyltransferase OS=Clostridium difficile (strain 630) GN=glgC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.626e-14 Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + +L +IL GG G+RL TK+ AKPAV G YR+ID +SNC NS I + VLTQ+ LN H+ S+ + G V VL + + NW+ GTA A Sbjct: 3 KEMLAMILAGGQGSRLGVFTKRIAKPAVSFGGKYRIIDFVLSNCSNSGIDTVGVLTQYRPLILNSHI--GMGSHWDLDRINGGVYVLQPFMNEKEGNWYNGTAHA 105 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |