CF417165
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_PECCP (Glucose-1-phosphate adenylyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=glgC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.950e-22 Identity = 53/121 (43.80%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 221 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 V++ K+ L + + +IL GG GTRL LT RAKPAV G +R+ID +SNCLNS I +I V+TQ+ S +L +H+ R + S + NE FV++L AQQ +W++GTADA Sbjct: 2 VNNDKHDPLMLARQLPLKSVALILAGGRGTRLKGLTALRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SFLNAEMNE-FVDLLPAQQRNATDHWYRGTADA 120 HSP 2 Score: 31.5722 bits (70), Expect = 1.950e-22 Identity = 13/33 (39.39%), Postives = 20/33 (60.61%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFI 683 V Q L + + ++LAGDH+Y+MDY R + Sbjct: 121 VCQNLDIIRRYRAEYVVILAGDHIYKMDYSRML 153
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_RHORU (Glucose-1-phosphate adenylyltransferase OS=Rhodospirillum rubrum GN=glgC PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.951e-22 Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 263 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPENPNWFQGTADA 583 A + L ++L GG G+RL LT + +KPAVP G YR+ID P+SNC+NS I ++ V+TQ+ + +L H+ R + G + E FVE+ AQQ + +W+ GTADA Sbjct: 14 ALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIHHIQRGW----GFLRAEIGEFVELWPAQQQTDKESWYLGTADA 118 HSP 2 Score: 32.7278 bits (73), Expect = 1.951e-22 Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFI 683 V Q L L H+ L+LAGDH+Y+ DY + + Sbjct: 119 VHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLL 151
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_RHORT (Glucose-1-phosphate adenylyltransferase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgC PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.951e-22 Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 2 Query: 263 ASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPENPNWFQGTADA 583 A + L ++L GG G+RL LT + +KPAVP G YR+ID P+SNC+NS I ++ V+TQ+ + +L H+ R + G + E FVE+ AQQ + +W+ GTADA Sbjct: 14 ALKETLALVLAGGRGSRLRDLTNRESKPAVPFGGKYRIIDFPLSNCMNSGIRRMCVITQYRAHTLIHHIQRGW----GFLRAEIGEFVELWPAQQQTDKESWYLGTADA 118 HSP 2 Score: 32.7278 bits (73), Expect = 1.951e-22 Identity = 14/33 (42.42%), Postives = 20/33 (60.61%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFI 683 V Q L L H+ L+LAGDH+Y+ DY + + Sbjct: 119 VHQNLDLIRMHDPRFVLILAGDHIYKQDYSKLL 151
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_METFK (Glucose-1-phosphate adenylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glgC PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.538e-22 Identity = 46/106 (43.40%), Postives = 70/106 (66.04%), Query Frame = 2 Query: 266 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +++ + +IL GG G+RL LT AKPAVP G +R+ID P+SNC+NS + +I V+TQ+ + +L +H+ R + G + FVE+L AQQ + W++GTADA Sbjct: 16 TKNTVALILAGGKGSRLRDLTNWTAKPAVPFGGKFRIIDFPLSNCINSGVRRIGVVTQYKAHTLIQHIQRGWGFLRGEFNE--FVELLPAQQRIQE-EWYKGTADA 118 HSP 2 Score: 33.4982 bits (75), Expect = 2.538e-22 Identity = 15/35 (42.86%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 V Q L + + N+ L+LAGDH+Y+MDY + + A Sbjct: 119 VFQNLDILRQTNIEFVLILAGDHVYKMDYGQMLAA 153
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_RHOFD (Glucose-1-phosphate adenylyltransferase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.302e-22 Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 R + ++L GG G+RL LT+ AKPAV G +R+ID +SNC+NS + +I VLTQ+ S SL RHL + S + NE F+++L AQQ + +W++GTADA Sbjct: 11 RRTISLVLAGGRGSRLQDLTENCAKPAVHFGGKFRIIDFVLSNCVNSGLHRIGVLTQYKSHSLLRHLQHGW-SFLRNEVNE-FIDLLPAQQRVDEASWYRGTADA 113 HSP 2 Score: 33.8834 bits (76), Expect = 3.302e-22 Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQ 686 V Q + + EH+ LVLAGDH+Y+M+Y I+ Sbjct: 114 VYQNIDILREHDPKYILVLAGDHVYKMNYASLIE 147
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_TERTT (Glucose-1-phosphate adenylyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=glgC PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.303e-22 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 2 Query: 251 LDPEA------SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPENPNWFQGTADA 583 LDP + +R + +IL GG G+RL+ LT RAKPA+ G +R+ID P+SNC+NS I ++ VLTQ+ + SL RHL R ++ +K E +VE+L A Q +PNW+QGTADA Sbjct: 2 LDPNSRYVSRLTRDTMALILAGGRGSRLHELTDWRAKPALHFGGKFRIIDFPLSNCVNSGIRRVGVLTQYKAHSLIRHLVRGWSH----FKKELGEYVEILPASQR-YSPNWYQGTADA 115 HSP 2 Score: 26.9498 bits (58), Expect = 3.303e-22 Identity = 9/13 (69.23%), Postives = 13/13 (100.00%), Query Frame = 3 Query: 633 LVLAGDHLYRMDY 671 +VL+GDH+Y+MDY Sbjct: 132 MVLSGDHVYQMDY 144
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC_LACLM (Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=glgC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.305e-22 Identity = 48/103 (46.60%), Postives = 62/103 (60.19%), Query Frame = 2 Query: 275 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 +LG+IL GG GTRL LTK AKPAVP G YR+ID +SNC NSN+ + V+TQ+ +LN H+ + G N G V +L S E WF+GT+ A Sbjct: 5 MLGLILAGGQGTRLGKLTKDVAKPAVPFGGRYRIIDFALSNCANSNVKNVGVITQYQPLTLNAHIGNGAPWGLNGI-NRG-VTILQPYFSQEGSKWFEGTSHA 105 HSP 2 Score: 33.4982 bits (75), Expect = 4.305e-22 Identity = 13/35 (37.14%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 585 VRQYLWLFEEHNVLEFLVLAGDHLYRMDYERFIQA 689 V Q + ++ N L+L+GDH+Y+MDYE +++ Sbjct: 106 VYQNISYIDQQNPEYVLILSGDHIYKMDYEAMLES 140
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBPA (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio parahaemolyticus GN=glgC2 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.594e-22 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAA--QQSPENPNWFQGTADA 583 + L +IL GG G+RL PLT RAKPAVP G YR+ID ++NCLNS + KI VLTQ+ S SL +HL ++ N E + A Q + W++GTADA Sbjct: 2 QDALAVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLNSGLRKILVLTQYKSHSLQKHLRDGWS-----IFNPELGEYITAVPPQMRKGGAWYEGTADA 103 HSP 2 Score: 35.4242 bits (80), Expect = 5.594e-22 Identity = 13/30 (43.33%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 597 LWLFEEHNVLEFLVLAGDHLYRMDYERFIQ 686 LWL ++ +VL+GDH+YRMDY ++ Sbjct: 108 LWLLSRNDAKYVVVLSGDHIYRMDYAAMLE 137
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBVY (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio vulnificus (strain YJ016) GN=glgC2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.594e-22 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYA---SNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + +L +IL GG G+RL PLT RAKPAVP G YR+ID ++NCL+S + KI VLTQ+ S SL +HL ++ +G Y Q + W++GTADA Sbjct: 2 QDILTVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELGEYITS------VPPQMRKGGKWYEGTADA 103 HSP 2 Score: 36.1946 bits (82), Expect = 5.594e-22 Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 3 Query: 597 LWLFEEHNVLEFLVLAGDHLYRMDYERFIQ 686 LWL E +VL+GDH+YRMDY ++ Sbjct: 108 LWLLERSEAKYVMVLSGDHIYRMDYAPMLE 137
BLAST of CF417165 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBVU (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio vulnificus GN=glgC2 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.594e-22 Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 269 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYA---SNMGGYKNEGFVEVLAAQQSPENPNWFQGTADA 583 + +L +IL GG G+RL PLT RAKPAVP G YR+ID ++NCL+S + KI VLTQ+ S SL +HL ++ +G Y Q + W++GTADA Sbjct: 2 QDILTVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWSIFNPELGEYITS------VPPQMRKGGKWYEGTADA 103 HSP 2 Score: 36.1946 bits (82), Expect = 5.594e-22 Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 3 Query: 597 LWLFEEHNVLEFLVLAGDHLYRMDYERFIQ 686 LWL E +VL+GDH+YRMDY ++ Sbjct: 108 LWLLERSEAKYVMVLSGDHIYRMDYAPMLE 137 The following BLAST results are available for this feature:
BLAST of CF417165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 307
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417165 ID=CF417165; Name=CF417165; organism=Citrus sinensis; type=EST; length=690bpback to top |