CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 5.004e-32
Identity = 88/199 (44.22%), Postives = 112/199 (56.28%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +ME Y KLEK+GEGTY  VYK + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD DLK+++D          +    ++ FLYQ+ +G+A+CH   VLHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDIVHTDKSLT-----------------------LVFEYLDKDLKQYMDD-----CGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQN-LLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYR 355          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.456e-31
Identity = 86/199 (43.22%), Postives = 112/199 (56.28%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  VYK K K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H + SL                        LVFEYLD DLK+++D      N        ++ FL+QL +G+A+CH   VLHRDLKPQN               GL RA ++P K+Y++E+VTLWYR
Sbjct:  161 KLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDIIHTEKSLT-----------------------LVFEYLDKDLKQYLDDCGNVINMHN-----VKLFLFQLLRGLAYCHRQKVLHRDLKPQN-LLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYR 328          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.469e-31
Identity = 73/198 (36.87%), Postives = 102/198 (51.52%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            M +YEK +++GEGTYG V KA D    + VALKK + E +++GIP T++RE+++L  L     VV L  +   D  L                       YLVFE+ D DL +F+    K      +P    +S +YQ+ +G+A CH H +LHRD+KPQN               GL R  T+  + YT E+VTLWYR
Sbjct:    1 MTRYEKKQQLGEGTYGVVCKAWDTVCNRYVALKKIKQEREDDGIPVTSVREIAVLLELKHP-NVVDLYDIYLEDKFL-----------------------YLVFEFCDEDLYQFMSRSSK------IPINETRSIVYQILQGLAFCHYHQILHRDMKPQN-ILINKNGTIKLGEFGLARLTTINDRKYTSEVVTLWYR 167          

HSP 2 Score: 41.9726 bits (97), Expect = 1.469e-31
Identity = 15/31 (48.39%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+LLG+T Y  A+D+WS   IF E++ ++
Sbjct:  168 APEILLGATQYGGAIDIWSTAAIFGELINKE 198          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 86/199 (43.22%), Postives = 112/199 (56.28%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  VYK K K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H + SL                        LVFEYLD DLK+++D      N        ++ FL+QL +G+A+CH   VLHRDLKPQN               GL RA ++P K+Y++E+VTLWYR
Sbjct:  161 KLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDIIHTEKSLT-----------------------LVFEYLDKDLKQYLDDCGNIINMHN-----VKLFLFQLLRGLAYCHRQKVLHRDLKPQN-LLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYR 328          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK10_DICDI (Probable cyclin-dependent kinase 10 OS=Dictyostelium discoideum GN=cdk10 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.906e-31
Identity = 72/196 (36.73%), Postives = 104/196 (53.06%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRL-EMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +EKL+ +GEGTYG V K +DK TG++VALKK ++ + D++GIP T+LRE+ +L+ +                      +P+  S       + G   +YLVFEYL+ D+   ID+  K     P   + I+ FL QL + V + HSH ++HRDLK  N               GL R F  P++S T  +VTLWYR
Sbjct:    7 FEKLDSIGEGTYGIVSKGRDKETGRIVALKKVKIGQQDKDGIPLTSLREIQILKEI---------------------KHPNIVSLLEVVIGSTG-DKIYLVFEYLEHDVASLIDNINK-----PFKLSEIKCFLLQLLRAVEYLHSHWIIHRDLKCSN-LLYGNNGNLKLADFGLARKFGYPIESITPCMVTLWYR 174          

HSP 2 Score: 42.3578 bits (98), Expect = 1.906e-31
Identity = 17/28 (60.71%), Postives = 23/28 (82.14%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            +PE+LLG   YSTAVD+WS+G IF E++
Sbjct:  175 SPELLLGCQKYSTAVDLWSIGSIFGELL 202          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.200e-31
Identity = 72/197 (36.55%), Postives = 100/197 (50.76%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++Y K E +GEGTYG V+KA D  TG  VA+KK RL   +EG+  TALRE+ LL+ L  S  ++ L+                    AF      K NL+LVFE+++TDL+  I           L P   +S++  + KG+A CH   VLHRD+KP N               GL R F  P +++TH++   WYR
Sbjct:   17 DRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDS-NIIELI-------------------DAFPY----KGNLHLVFEFMETDLEAVIRDRN-----IVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNN-LLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYR 183          

HSP 2 Score: 44.2838 bits (103), Expect = 4.200e-31
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+L G+  Y +AVD+W+ GCIFAE++ R+
Sbjct:  184 APELLFGTKQYGSAVDIWAAGCIFAELLLRR 214          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.469e-31
Identity = 72/197 (36.55%), Postives = 100/197 (50.76%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++Y K E +GEGTYG V+KA D  TG  VA+KK RL   +EG+  TALRE+ LL+ L  S  ++ L+                    AF      K NL+LVFE+++TDL+  I           L P   +S++  + KG+A CH   VLHRD+KP N               GL R F  P +++TH++   WYR
Sbjct:   17 DRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYKEGVNFTALREIKLLKELKDS-NIIELI-------------------DAFPY----KGNLHLVFEFMETDLEAVIRDRN-----IVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNN-LLIGADGQLKLADFGLARIFGSPERNFTHQVFARWYR 183          

HSP 2 Score: 44.2838 bits (103), Expect = 5.469e-31
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+L G+  Y +AVD+W+ GCIFAE++ R+
Sbjct:  184 APELLFGTKQYGSAVDIWAAGCIFAELLLRR 214          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKD3_ARATH (Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.131e-31
Identity = 71/198 (35.86%), Postives = 99/198 (50.00%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFI-DSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++Y K E +G+GTYG V+KA D  T Q VA+KK RL    EG+  TALRE+ +L+ L     ++ +    H                        K NL+LVFE+++TDL+  I DS+        L P  I+S+L    KG+A+CH   VLHRD+KP N               GL R F  P + +TH++   WYR
Sbjct:   10 DRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELKHPHIILLIDAFPH------------------------KENLHLVFEFMETDLEAVIRDSNIF------LSPADIKSYLLMTFKGLAYCHDKWVLHRDMKPNN-LLIGVDGQLKLADFGLARIFGSPNRKFTHQVFARWYR 176          

HSP 2 Score: 43.1282 bits (100), Expect = 7.131e-31
Identity = 17/31 (54.84%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+L G+  Y  AVD+W+V CIFAE++ R+
Sbjct:  177 APELLFGAKQYGAAVDVWAVACIFAELLLRR 207          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK6_MOUSE (Cell division protein kinase 6 OS=Mus musculus GN=Cdk6 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 7.151e-31
Identity = 73/200 (36.50%), Postives = 111/200 (55.50%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKD-KATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLY--VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++YE + ++GEG YGKV+KA+D K  G+ VALK+ R++  EEG+P + +REV++L+ L    +  VVRL  V  V  +                  + ++ L LVFE++D DL  ++D   K P P  +P   I+  ++QL +G+   HSH V+HRDLKPQN               GL R ++  + + T  +VTLWYR
Sbjct:   11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTSEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT------------------DRETKLTLVFEHVDQDLTTYLD---KVPEPG-VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN-ILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYR 186          

HSP 2 Score: 46.2098 bits (108), Expect = 7.151e-31
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APEVLL S+ Y+T VD+WSVGCIFAEM +R+
Sbjct:  187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRK 216          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK6_HUMAN (Cell division protein kinase 6 OS=Homo sapiens GN=CDK6 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.312e-31
Identity = 73/200 (36.50%), Postives = 111/200 (55.50%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKD-KATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLY--VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++YE + ++GEG YGKV+KA+D K  G+ VALK+ R++  EEG+P + +REV++L+ L    +  VVRL  V  V  +                  + ++ L LVFE++D DL  ++D   K P P  +P   I+  ++QL +G+   HSH V+HRDLKPQN               GL R ++  + + T  +VTLWYR
Sbjct:   11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT------------------DRETKLTLVFEHVDQDLTTYLD---KVPEPG-VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN-ILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYR 186          

HSP 2 Score: 46.2098 bits (108), Expect = 9.312e-31
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APEVLL S+ Y+T VD+WSVGCIFAEM +R+
Sbjct:  187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRK 216          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CDK17_HUMAN5.004e-3244.22Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDK16_MOUSE1.456e-3143.22Cell division protein kinase 16 OS=Mus musculus GN... [more]
CDK2_ENTHI1.469e-3136.87Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK16_HUMAN1.901e-3143.22Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK10_DICDI1.906e-3136.73Probable cyclin-dependent kinase 10 OS=Dictyosteli... [more]
CDKD1_ORYSI4.200e-3136.55Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDKD1_ORYSJ5.469e-3136.55Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDKD3_ARATH7.131e-3135.86Cyclin-dependent kinase D-3 OS=Arabidopsis thalian... [more]
CDK6_MOUSE7.151e-3136.50Cell division protein kinase 6 OS=Mus musculus GN=... [more]
CDK6_HUMAN9.312e-3136.50Cell division protein kinase 6 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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