CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CKD18_RAT (Cell division protein kinase 18 OS=Rattus norvegicus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.437e-31
Identity = 84/199 (42.21%), Postives = 113/199 (56.78%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  V+K + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD+DLK+++D      N        ++ F++QL +G+A+CH   +LHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  117 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDLIHTDRSLT-----------------------LVFEYLDSDLKQYLDHCGNLMNMHN-----VKIFMFQLLRGLAYCHRRKILHRDLKPQN-LLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYR 284          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.437e-31
Identity = 84/199 (42.21%), Postives = 113/199 (56.78%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  V+K + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD+DLK+++D      N        ++ F++QL +G+A+CH   +LHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  117 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDLIHTDRSLT-----------------------LVFEYLDSDLKQYLDHCGNLMNMHN-----VKIFMFQLLRGLAYCHHRKILHRDLKPQN-LLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYR 284          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.437e-31
Identity = 85/199 (42.71%), Postives = 111/199 (55.78%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  VYK K K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H + SL                        LVFEYLD DLK+++D      N        ++ FL+QL +G+A+CH   VLHRDLKPQN               GL  A ++P K+Y++E+VTLWYR
Sbjct:  161 KLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLE-HEEGAPCTAIREVSLLKDLKHA-NIVTLHDIIHTEKSLT-----------------------LVFEYLDKDLKQYLDDCGNVINMHN-----VKLFLFQLLRGLAYCHRQKVLHRDLKPQN-LLINERGELKLADFGLAYAKSIPTKTYSNEVVTLWYR 328          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.194e-30
Identity = 63/198 (31.82%), Postives = 103/198 (52.02%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +E+++ L ++ EGTYG VY+AKDK T ++VALK+ ++E ++EG P T+LRE++ L                     LK  +P+  +       +N    +++V +Y++ DLK  +++ +     +   P  ++    QL + VAH H + +LHRDLK  N               GL R +  P+K YT  +VTLWYR
Sbjct:  555 VEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTL---------------------LKGQHPNIVTVREIVVGSN-MDKIFIVMDYVEHDLKSLMETMKN--RKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKTSN-LLLSHKGILKVGDFGLAREYGSPIKKYTSLVVTLWYR 727          

HSP 2 Score: 43.8986 bits (102), Expect = 1.194e-30
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVK 687
            APE+LL S  YST +D+WSVGCIFAE ++
Sbjct:  728 APELLLCSPVYSTPIDVWSVGCIFAEFLQ 756          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKD1_ARATH (Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.574e-30
Identity = 68/197 (34.52%), Postives = 101/197 (51.27%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++Y K E +G+GTYG V+KA D   G+ VA+KK RL  ++EG+  TALRE+ LL+ L    +++ L+                    AF      K NL++VFE+++TDL+  I           L P  ++S+L  + KG+ +CH   VLHRD+KP N               GL R F  P + +TH++   WYR
Sbjct:    9 DRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKELKHP-HIIELI-------------------DAFP----HKENLHIVFEFMETDLEAVIRDRN-----LYLSPGDVKSYLQMILKGLEYCHGKWVLHRDMKPNN-LLIGPNGQLKLADFGLARIFGSPGRKFTHQVFARWYR 175          

HSP 2 Score: 43.1282 bits (100), Expect = 1.574e-30
Identity = 17/31 (54.84%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+L G+  Y  AVD+W+ GCIFAE++ R+
Sbjct:  176 APELLFGAKQYDGAVDVWAAGCIFAELLLRR 206          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKD2_ARATH (Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.054e-30
Identity = 71/198 (35.86%), Postives = 100/198 (50.51%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +++Y + + +GEGTYG VYKA D  TG+ VA+KK RL   +EG+  TALRE+ LL+ L+   ++V L+     D S                       L+LVFEY+ TDL+  I           L P  I+S++    KG+A+CH   VLHRD+KP N               GL R F  P + +TH++   WYR
Sbjct:   10 VDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKELNHP-HIVELIDAFPHDGS-----------------------LHLVFEYMQTDLEAVIRDRNIF-----LSPGDIKSYMLMTLKGLAYCHKKWVLHRDMKPNN-LLIGENGLLKLADFGLARLFGSPNRRFTHQVFATWYR 177          

HSP 2 Score: 43.5134 bits (101), Expect = 2.054e-30
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE+L GS  Y   VD+W+ GCIFAE++ R+
Sbjct:  178 APELLFGSRQYGAGVDVWAAGCIFAELLLRR 208          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30
Identity = 83/199 (41.71%), Postives = 113/199 (56.78%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  V+K + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD+DLK+++D          +    ++ F++QL +G+A+CH   +LHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  138 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKNLKHA-NIVTLHDLIHTDRSLT-----------------------LVFEYLDSDLKQYLDH-----CGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQN-LLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYR 305          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 132.109 bits (331), Expect = 2.746e-30
Identity = 83/199 (41.71%), Postives = 113/199 (56.78%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++E Y KL+K+GEGTY  V+K + K T  LVALK+ RLE  EEG P TA+REVSLL+ L  +  +V L  + H D SL                        LVFEYLD+DLK+++D          +    ++ F++QL +G+A+CH   +LHRDLKPQN               GL RA +VP K+Y++E+VTLWYR
Sbjct:  138 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLE-HEEGAPCTAIREVSLLKNLKHA-NIVTLHDLIHTDRSLT-----------------------LVFEYLDSDLKQYLDH-----CGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQN-LLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYR 305          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKE1_ORYSJ (Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.465e-30
Identity = 68/214 (31.78%), Postives = 109/214 (50.93%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKAT-----------GQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN---XXXXXXXXXXXXXXXGLGRAFTVPLKSYTHE--IVTLWYR 599
            +++YE + K+GEGTYG V+ A+ K +           G  +A+KK +   + +G+ PTA+RE+ LL+ ++    VV+L+ V H+                    N+   +LYL F+Y + DL + I  HR+  N  P+ P  ++S L+QL  G+ + HS+ ++HRDLKP N                  GL R +  PLK  +    +VT+WYR
Sbjct:   16 LQQYELVGKIGEGTYGLVFLARLKQSHPHAAAGVGRRGSPIAIKKFKQSKEGDGVSPTAIREIMLLREINHE-NVVKLVNV-HI--------------------NHADMSLYLAFDYAEHDLYEIIRHHREKLN-LPINPYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLSDNGVVVTIWYR 206          

HSP 2 Score: 50.8322 bits (120), Expect = 3.465e-30
Identity = 20/28 (71.43%), Postives = 27/28 (96.43%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+ HY++AVDMW+VGCIFAE++
Sbjct:  207 APELLLGAKHYTSAVDMWAVGCIFAELL 234          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK10_MOUSE (Cell division protein kinase 10 OS=Mus musculus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.532e-30
Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++EKL ++GEGTYG VY+A+D  T ++VALKK R++ +++GIP ++LRE++LL                     L+  +P+          N+ +S ++LV  Y + DL   +++      P P     ++  + Q+ +G+ + H + ++HRDLK  N               GL RA+ VP+K  T ++VTLWYR
Sbjct:   36 VKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLL---------------------LRLRHPNIVELKEVVVGNHLES-IFLVMGYCEQDLASLLENM-----PTPFSEAQVKCIMLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADF-GLARAYGVPVKPMTPKVVTLWYR 205          

HSP 2 Score: 43.8986 bits (102), Expect = 4.532e-30
Identity = 17/28 (60.71%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+T  +T++DMW+VGCI AE++
Sbjct:  206 APELLLGTTTQTTSIDMWAVGCILAELL 233          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CKD18_RAT9.437e-3142.21Cell division protein kinase 18 OS=Rattus norvegic... [more]
CDK18_MOUSE9.437e-3142.21Cell division protein kinase 18 OS=Mus musculus GN... [more]
CDK16_RAT9.437e-3142.71Cell division protein kinase 16 OS=Rattus norvegic... [more]
KP58_DROME1.194e-3031.82Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]
CDKD1_ARATH1.574e-3034.52Cyclin-dependent kinase D-1 OS=Arabidopsis thalian... [more]
CDKD2_ARATH2.054e-3035.86Cyclin-dependent kinase D-2 OS=Arabidopsis thalian... [more]
CDK18_PONAB2.746e-3041.71Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN2.746e-3041.71Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDKE1_ORYSJ3.465e-3031.78Cyclin-dependent kinase E-1 OS=Oryza sativa subsp.... [more]
CDK10_MOUSE4.532e-3031.31Cell division protein kinase 10 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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