CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK10_RAT (Cell division protein kinase 10 OS=Rattus norvegicus GN=Cdk10 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.532e-30
Identity = 63/198 (31.82%), Postives = 105/198 (53.03%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++EKL ++GEGTYG VY+A+D  T ++VALKK R++ +++GIP ++LRE++LL                     L+  +P+          N+ +S ++LV  Y + DL   +++      P P     ++  L Q+ +G+ + H   ++HRDLK  N               GL RA+ VP+K  T ++VTLWYR
Sbjct:   34 VKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLL---------------------LRLRHPNIVELKEVVVGNHLES-IFLVMGYCEQDLASLLENM-----PTPFSEAQVKCILLQVLRGLQYLHRSFIIHRDLKVSNLLMTDKGCVKTADF-GLARAYGVPVKPMTPKVVTLWYR 203          

HSP 2 Score: 43.8986 bits (102), Expect = 4.532e-30
Identity = 17/28 (60.71%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+T  +T++DMW+VGCI AE++
Sbjct:  204 APELLLGTTTQTTSIDMWAVGCILAELL 231          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDC21_PEA (Cell division control protein 2 homolog 1 (Fragment) OS=Pisum sativum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.684e-30
Identity = 74/175 (42.29%), Postives = 100/175 (57.14%), Query Frame = 3
Query:   57 VYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEI 581
            VYKA+D+ T + +ALKK RLE ++EG+P TA+RE+SLL+ + Q   +VRL  V H                        +  LYLVFEYLD DLKK +DS  +        P  ++ FLYQ+  G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+
Sbjct:    2 VYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHRNIVRLQDVVH-----------------------SEKRLYLVFEYLDLDLKKHMDSSPEFVKD----PRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNCVKLADFGLARAFGIPVRTFTHEV 148          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK10_HUMAN (Cell division protein kinase 10 OS=Homo sapiens GN=CDK10 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.900e-30
Identity = 62/198 (31.31%), Postives = 106/198 (53.54%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++EKL ++GEGTYG VY+A+D  T ++VALKK R++ +++GIP ++LRE++LL                     L+  +P+          N+ +S ++LV  Y + DL   +++      P P     ++  + Q+ +G+ + H + ++HRDLK  N               GL RA+ VP+K  T ++VTLWYR
Sbjct:   36 VKEFEKLNRIGEGTYGIVYRARDTQTDEIVALKKVRMDKEKDGIPISSLREITLL---------------------LRLRHPNIVELKEVVVGNHLES-IFLVMGYCEQDLASLLENM-----PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADF-GLARAYGVPVKPMTPKVVTLWYR 205          

HSP 2 Score: 43.8986 bits (102), Expect = 5.900e-30
Identity = 17/28 (60.71%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+T  +T++DMW+VGCI AE++
Sbjct:  206 APELLLGTTTQTTSIDMWAVGCILAELL 233          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK7_RAT (Cell division protein kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.694e-30
Identity = 70/197 (35.53%), Postives = 101/197 (51.27%), Query Frame = 3
Query:   18 EKLEKVGEGTYGKVYKAKDKATGQLVALKKTRL---EMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            EKL+ +GEG +  VYKA+DK T Q+VA+KK +L      ++GI  TALRE+ LLQ LS    +  L    H                        KSN+ LVF++++TDL+  I       N   L P+ I++++    +G+ + H H +LHRDLKP N               GL ++F  P  +YTH++VT WYR
Sbjct:    5 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH------------------------KSNISLVFDFMETDLEVIIKD-----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNN-LLLDENGVLKLADFGLAKSFGSPNWAYTHQVVTRWYR 171          

HSP 2 Score: 41.9726 bits (97), Expect = 7.694e-30
Identity = 17/30 (56.67%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            APE+L G+  Y   VDMW+VGCI AE++ R
Sbjct:  172 APELLFGARMYGVGVDMWAVGCILAELLLR 201          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK20_RAT (Cell division protein kinase 20 OS=Rattus norvegicus GN=Cdk20 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.001e-29
Identity = 73/199 (36.68%), Postives = 102/199 (51.26%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYR 599
            M++Y  L ++GEG +G V+KAK   TG++VALKK  L   E+GIP  ALRE+  LQ +  S YVV+L  V             P  A              L FE++ +DL + +   +     RPL P  ++S+L  L KGVA CH++ ++HRDLKP N               GL R F+    + YTH++ T WYR
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQLKAV------------FPHGA-----------GFVLAFEFMLSDLAEVVRHAQ-----RPLAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPAN-LLISASGQLKIADFGLARVFSPDGGRLYTHQVATRWYR 170          

HSP 2 Score: 38.1206 bits (87), Expect = 1.001e-29
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+L G+  Y   VD+W+VGCI  E++
Sbjct:  171 APELLYGARQYDQGVDLWAVGCIMGELL 198          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK20_MOUSE (Cell division protein kinase 20 OS=Mus musculus GN=Cdk20 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.001e-29
Identity = 73/199 (36.68%), Postives = 102/199 (51.26%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYR 599
            M++Y  L ++GEG +G V+KAK   TG++VALKK  L   E+GIP  ALRE+  LQ +  S YVV+L  V             P  A              L FE++ +DL + +   +     RPL P  ++S+L  L KGVA CH++ ++HRDLKP N               GL R F+    + YTH++ T WYR
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEIEDSQYVVQLKAV------------FPHGA-----------GFVLAFEFMLSDLAEVVRHAQ-----RPLAPAQVKSYLQMLLKGVAFCHANNIVHRDLKPAN-LLISASGQLKIADFGLARVFSPDGGRLYTHQVATRWYR 170          

HSP 2 Score: 38.1206 bits (87), Expect = 1.001e-29
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+L G+  Y   VD+W+VGCI  E++
Sbjct:  171 APELLYGARQYDQGVDLWAVGCIMGELL 198          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK10_BOVIN (Cell division protein kinase 10 OS=Bos taurus GN=CDK10 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.302e-29
Identity = 60/198 (30.30%), Postives = 106/198 (53.54%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            ++++EKL ++GEGTYG VY+A+D  T ++VALKK R++ +++G+P ++LRE++LL                     L+  +P+          N+ +S ++LV  Y + DL   +++      P P     ++  + Q+ +G+ + H + ++HRDLK  N               GL RA+ +P+K  T ++VTLWYR
Sbjct:   34 VKEFEKLNRIGEGTYGIVYRARDTHTDEIVALKKVRMDKEKDGVPISSLREITLL---------------------LRLRHPNIVELKEVVVGNHLES-IFLVMGYCEQDLASLLENM-----PTPFSEAQVKCIVLQVLRGLQYLHRNFIIHRDLKVSNLLMTDKGCVKTADF-GLARAYGIPVKPMTPKVVTLWYR 203          

HSP 2 Score: 43.8986 bits (102), Expect = 1.302e-29
Identity = 17/28 (60.71%), Postives = 25/28 (89.29%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLG+T  +T++DMW+VGCI AE++
Sbjct:  204 APELLLGTTTQTTSIDMWAVGCILAELL 231          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 8.174e-29
Identity = 63/199 (31.66%), Postives = 102/199 (51.26%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKS-NNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            +++YE + +V EGT+G VY+ KDK T ++VALK+ ++E ++EG P TALRE+++L                     LK+ N+P+  +       +N    +Y+  E+++ D+K  +D+  +      +     ++ L QL  G+ H H   +LHRDLK  N               GL R +  PLK +T  +VTLWYR
Sbjct:  353 IDEYECVNRVDEGTFGVVYRGKDKRTDEIVALKRLKMEKEKEGFPITALREINML---------------------LKAGNHPNIVNVKEILLGSN-MDKIYMAMEFVEHDMKSLLDTMSRRNKRFSIGEQ--KTLLQQLLSGIEHMHKLWILHRDLKTSN-LLMSHKGILKIADFGLAREYGDPLKKFTSIVVTLWYR 526          

HSP 2 Score: 45.0542 bits (105), Expect = 8.174e-29
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            +PE+LLG+  YST VDMWSVGCI AE +
Sbjct:  527 SPELLLGTRLYSTPVDMWSVGCIMAEFI 554          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKE1_ARATH (Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 8.225e-29
Identity = 66/204 (32.35%), Postives = 102/204 (50.00%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQL-VALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN---XXXXXXXXXXXXXXXGLGRAFTVPLKSYTHE--IVTLWYR 599
            +++Y  + K+GEGTYG V+ A+ K   +  +A+KK +   D +G+ PTA+RE+ LL+ +S    VV+L+ V H+                    N    +LYL F+Y + DL + I  HR       L    ++S L+QL  G+ + HS+ ++HRDLKP N                  GL R +  PLK  +    +VT+WYR
Sbjct:   22 LQQYNLVGKIGEGTYGLVFLARTKTPPKRPIAIKKFKQSKDGDGVSPTAIREIMLLREISHE-NVVKLVNV-HI--------------------NFADMSLYLAFDYAEYDLYEIIRHHRDKVG-HSLNTYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDAEEHGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYR 202          

HSP 2 Score: 51.9878 bits (123), Expect = 8.225e-29
Identity = 21/28 (75.00%), Postives = 27/28 (96.43%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+LLGS HY++AVDMW+VGCIFAE++
Sbjct:  203 APELLLGSKHYTSAVDMWAVGCIFAELL 230          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK20_PONAB (Cell division protein kinase 20 OS=Pongo abelii GN=CDK20 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 8.267e-29
Identity = 71/199 (35.68%), Postives = 102/199 (51.26%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYR 599
            M++Y  L ++GEG +G V+KAK   TG++VALKK  L   E+GIP  ALRE+  LQ +  + YVV+L  V             P SA              L FE++ +DL + +   +     RPL    ++S+L  L KGV+ CH++ ++HRDLKP N               GL R F+    + YTH++ T WYR
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEMEDNQYVVQLKAV------------FPHSA-----------GFVLAFEFMLSDLAEVVRHAQ-----RPLAQAQVKSYLQMLLKGVSFCHANNIVHRDLKPAN-LLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYR 170          

HSP 2 Score: 38.1206 bits (87), Expect = 8.267e-29
Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+L G+  Y   VD+W+VGCI  E++
Sbjct:  171 APELLYGARQYDQGVDLWAVGCIMGELL 198          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CDK10_RAT4.532e-3031.82Cell division protein kinase 10 OS=Rattus norvegic... [more]
CDC21_PEA4.684e-3042.29Cell division control protein 2 homolog 1 (Fragmen... [more]
CDK10_HUMAN5.900e-3031.31Cell division protein kinase 10 OS=Homo sapiens GN... [more]
CDK7_RAT7.694e-3035.53Cell division protein kinase 7 (Fragment) OS=Rattu... [more]
CDK20_RAT1.001e-2936.68Cell division protein kinase 20 OS=Rattus norvegic... [more]
CDK20_MOUSE1.001e-2936.68Cell division protein kinase 20 OS=Mus musculus GN... [more]
CDK10_BOVIN1.302e-2930.30Cell division protein kinase 10 OS=Bos taurus GN=C... [more]
YP62_CAEEL8.174e-2931.66Putative serine/threonine-protein kinase B0495.2 O... [more]
CDKE1_ARATH8.225e-2932.35Cyclin-dependent kinase E-1 OS=Arabidopsis thalian... [more]
CDK20_PONAB8.267e-2935.68Cell division protein kinase 20 OS=Pongo abelii GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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