CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.067e-28
Identity = 74/199 (37.19%), Postives = 103/199 (51.76%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLL--CVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS--YTHEIVTLWYR 599
            YEK++++GEGTYGKVYKA +  TG LVALK+ RLE +++G P T +REV +LQ L     +VRLL   VE                         KS++Y+VFEY+D DL   + +     +     P  I+    Q+ + +A+ H  GVLHRD+K  N               GL R F    KS  YT+ ++TLW+R
Sbjct:  277 YEKIDQIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVREVKILQRLRHK-NIVRLLEIMVE-------------------------KSSVYMVFEYMDHDLTGVLLN-----SQLHFTPGNIKHLSKQIFEALAYLHHRGVLHRDIKGSN-ILLNNNGDLKFADFGLAR-FNTSSKSANYTNRVITLWFR 442          

HSP 2 Score: 41.5874 bits (96), Expect = 1.067e-28
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEM 681
            PE+LLG T Y TAVD+WS GCI  E+
Sbjct:  444 PELLLGETAYDTAVDIWSAGCIVMEL 469          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK7_XENLA (Cell division protein kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.076e-28
Identity = 71/202 (35.15%), Postives = 101/202 (50.00%), Query Frame = 3
Query:    3 RMEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEE---GIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            R ++YEKL+ +GEG +  VYKA+DK T ++VA+KK +L    E   GI  TALRE+ LLQ LS    +  L    H                        KSN+ LVF++++TDL+  I           L P  I+S++    +G+ + H   +LHRDLKP N               GL ++F  P + YTH++VT WYR
Sbjct:   14 RAKQYEKLDFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEANDGINRTALREIKLLQELSHPNIIGLLDAFGH------------------------KSNISLVFDFMETDLEVIIKD-----TSLVLTPAHIKSYMLMTLQGLEYLHHLWILHRDLKPNN-LLLDENGVLKLADFGLAKSFGSPNRIYTHQVVTRWYR 185          

HSP 2 Score: 40.817 bits (94), Expect = 1.076e-28
Identity = 16/30 (53.33%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            +PE+L G+  Y   VDMW+VGCI AE++ R
Sbjct:  186 SPELLFGARMYGVGVDMWAVGCILAELLLR 215          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDKL1_DANRE (Cyclin-dependent kinase-like 1 OS=Danio rerio GN=cdkl1 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.091e-28
Identity = 66/198 (33.33%), Postives = 95/198 (47.98%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYR 599
            MEKYEK+ K+GEG+YG V+K ++K TGQ+VA+KK     D+  I   ALRE+ +L+ L     +V L+ V                          K  L+LVFEY D  +   +D +     PR +P  +++S ++Q  + V  CH    +HRD+KP+N               G  R  T P   YT  + T WYR
Sbjct:    1 MEKYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKHP-NLVNLMEV-----------------------FRRKRKLHLVFEYCDHTVLNELDRY-----PRGVPEHMVKSIIWQTLQAVNFCHKQNCIHRDVKPEN-ILITKHQVIKLCDFGFARILTGPCDYYTDCVATRWYR 168          

HSP 2 Score: 43.5134 bits (101), Expect = 3.091e-28
Identity = 16/28 (57.14%), Postives = 23/28 (82.14%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+L+G T Y   VD+W+VGC+FAE++
Sbjct:  169 APELLVGDTQYGPPVDVWAVGCVFAELL 196          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK20_HUMAN (Cell division protein kinase 20 OS=Homo sapiens GN=CDK20 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.026e-28
Identity = 69/199 (34.67%), Postives = 100/199 (50.25%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYR 599
            M++Y  L ++GEG +G V+KAK   TG++VALKK  L   E+G P  ALRE+  LQ +  + YVV+L  V                       + G     L FE++ +DL + +   +     RPL    ++S+L  L KGVA CH++ ++HRDLKP N               GL R F+    + YTH++ T WYR
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFPNQALREIKALQEMEDNQYVVQLKAV---------------------FPHGG--GFVLAFEFMLSDLAEVVRHAQ-----RPLAQAQVKSYLQMLLKGVAFCHANNIVHRDLKPAN-LLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYR 170          

HSP 2 Score: 39.2762 bits (90), Expect = 4.026e-28
Identity = 15/28 (53.57%), Postives = 20/28 (71.43%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMV 684
            APE+L G+  Y   VD+WSVGCI  E++
Sbjct:  171 APELLYGARQYDQGVDLWSVGCIMGELL 198          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK9B_XENLA (Cell division protein kinase 9-B OS=Xenopus laevis GN=cdk9-B PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.233e-28
Identity = 72/203 (35.47%), Postives = 111/203 (54.68%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFI-DSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS----YTHEIVTLWYR 599
            + KYE+L K+G+GT+G+V+KAK + TG+ VALKK  +E ++EG P TALRE+ +LQ+L     VV L+        +  N  SP +A+ +   N  K  ++LVF++ + DL   + ++H K           I+  +  L  G+ + H + +LHRD+K  N               GL RAF++   S    YT+ +VTLWYR
Sbjct:   16 VSKYERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVHLI-------EICRNKISP-TANQY---NRCKGTIFLVFDFCEHDLAGLLSNAHVK------FTVAEIKKVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYR 199          

HSP 2 Score: 37.7354 bits (86), Expect = 5.233e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            PE+LLG   Y   +D+W  GCI AEM  R
Sbjct:  201 PELLLGERDYGPPIDLWGAGCIMAEMWTR 229          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK9_XENTR (Cell division protein kinase 9 OS=Xenopus tropicalis GN=cdk9 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.813e-28
Identity = 70/203 (34.48%), Postives = 108/203 (53.20%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFI-DSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS----YTHEIVTLWYR 599
            + KYE+L K+G+GT+G+V+KAK + TG+ VALKK  +E ++EG P TALRE+ +LQ+L     VV L+ +     S  +N             N  K  ++LVF++ + DL   + ++H K         + I+  +  L  G+ + H + +LHRD+K  N               GL RAF++   S    YT+ +VTLWYR
Sbjct:   16 VSKYERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKISPTANQ-----------YNRCKGTIFLVFDFCEHDLAGLLSNAHVK------FTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYR 199          

HSP 2 Score: 37.7354 bits (86), Expect = 6.813e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            PE+LLG   Y   +D+W  GCI AEM  R
Sbjct:  201 PELLLGERDYGPPIDLWGAGCIMAEMWTR 229          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK9A_XENLA (Cell division protein kinase 9-A OS=Xenopus laevis GN=cdk9-A PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.813e-28
Identity = 70/203 (34.48%), Postives = 108/203 (53.20%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFI-DSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS----YTHEIVTLWYR 599
            + KYE+L K+G+GT+G+V+KAK + TG+ VALKK  +E ++EG P TALRE+ +LQ+L     VV L+ +     S  +N             N  K  ++LVF++ + DL   + ++H K         + I+  +  L  G+ + H + +LHRD+K  N               GL RAF++   S    YT+ +VTLWYR
Sbjct:   16 VSKYERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKVSPTANQ-----------YNRCKGTIFLVFDFCEHDLAGLLSNAHVK------FTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYR 199          

HSP 2 Score: 37.7354 bits (86), Expect = 6.813e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            PE+LLG   Y   +D+W  GCI AEM  R
Sbjct:  201 PELLLGERDYGPPIDLWGAGCIMAEMWTR 229          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK9_CHICK (Cell division protein kinase 9 OS=Gallus gallus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.814e-28
Identity = 71/203 (34.98%), Postives = 108/203 (53.20%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFI-DSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS----YTHEIVTLWYR 599
            + KYEKL K+G+GT+G+V+KAK + TG+ VALKK  +E ++EG P TALRE+ +LQ+L     VV L+ +    +S                 N  K ++YLVF++ + DL   + ++H K         + I+  +  L  G+ + H + +LHRD+K  N               GL RAF++   S    YT+ +VTLWYR
Sbjct:   16 VSKYEKLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKAS---------------PYNRCKGSIYLVFDFCEHDLAGLLSNTHVK------FTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 195          

HSP 2 Score: 36.5798 bits (83), Expect = 6.814e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            PE+LLG   Y   +D+W  GCI AEM  R
Sbjct:  197 PELLLGERDYGPPIDLWGGGCIMAEMWTR 225          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK9_RAT (Cell division protein kinase 9 OS=Rattus norvegicus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.870e-28
Identity = 70/200 (35.00%), Postives = 104/200 (52.00%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS----YTHEIVTLWYR 599
            KYEKL K+G+GT+G+V+KAK + TGQ VALKK  +E ++EG P TALRE+ +LQ+L     VV L+ +    +S                 N  K ++YLVF++ + DL   + +            + I+  +  L  G+ + H + +LHRD+K  N               GL RAF++   S    YT+ +VTLWYR
Sbjct:   18 KYEKLAKIGQGTFGEVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKAS---------------PYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 195          

HSP 2 Score: 37.7354 bits (86), Expect = 8.870e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            PE+LLG   Y   +D+W  GCI AEM  R
Sbjct:  197 PELLLGERDYGPPIDLWGAGCIMAEMWTR 225          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CDK9_MOUSE (Cell division protein kinase 9 OS=Mus musculus GN=Cdk9 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.870e-28
Identity = 70/200 (35.00%), Postives = 104/200 (52.00%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS----YTHEIVTLWYR 599
            KYEKL K+G+GT+G+V+KAK + TGQ VALKK  +E ++EG P TALRE+ +LQ+L     VV L+ +    +S                 N  K ++YLVF++ + DL   + +            + I+  +  L  G+ + H + +LHRD+K  N               GL RAF++   S    YT+ +VTLWYR
Sbjct:   18 KYEKLAKIGQGTFGEVFKAKHRQTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE-NVVNLIEICRTKAS---------------PYNRCKGSIYLVFDFCEHDLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYR 195          

HSP 2 Score: 37.7354 bits (86), Expect = 8.870e-28
Identity = 15/29 (51.72%), Postives = 18/29 (62.07%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKR 690
            PE+LLG   Y   +D+W  GCI AEM  R
Sbjct:  197 PELLLGERDYGPPIDLWGAGCIMAEMWTR 225          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
CTK1_SCHPO1.067e-2837.19CTD kinase subunit alpha OS=Schizosaccharomyces po... [more]
CDK7_XENLA1.076e-2835.15Cell division protein kinase 7 OS=Xenopus laevis G... [more]
CDKL1_DANRE3.091e-2833.33Cyclin-dependent kinase-like 1 OS=Danio rerio GN=c... [more]
CDK20_HUMAN4.026e-2834.67Cell division protein kinase 20 OS=Homo sapiens GN... [more]
CDK9B_XENLA5.233e-2835.47Cell division protein kinase 9-B OS=Xenopus laevis... [more]
CDK9_XENTR6.813e-2834.48Cell division protein kinase 9 OS=Xenopus tropical... [more]
CDK9A_XENLA6.813e-2834.48Cell division protein kinase 9-A OS=Xenopus laevis... [more]
CDK9_CHICK6.814e-2834.98Cell division protein kinase 9 OS=Gallus gallus GN... [more]
CDK9_RAT8.870e-2835.00Cell division protein kinase 9 OS=Rattus norvegicu... [more]
CDK9_MOUSE8.870e-2835.00Cell division protein kinase 9 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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