CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK01_XENLA (Mitogen-activated protein kinase 1 OS=Xenopus laevis GN=mapk1 PE=1 SV=3)

HSP 1 Score: 55.4546 bits (132), Expect = 2.646e-14
Identity = 45/158 (28.48%), Postives = 66/158 (41.77%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +Y  L  +GEG YG V  A D      VA+KK     + +      LRE+ +L                      K  N    +    A +     ++Y+V + ++TDL K + +         L    I  FLYQ+ +G+ + HS  VLHRDLKP N
Sbjct:   27 RYINLAYIGEGAYGMVCSAHDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRF-------------------KHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 157          

HSP 2 Score: 43.1282 bits (100), Expect = 2.646e-14
Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 1
Query:  553 FLSKAIPTRLLLSGIGAPEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            FL++ + TR       APE++L S  Y+ ++D+WSVGCI AEM+  +
Sbjct:  186 FLTEYVATRWYR----APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 228          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK01_RAT (Mitogen-activated protein kinase 1 OS=Rattus norvegicus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 55.4546 bits (132), Expect = 2.647e-14
Identity = 45/163 (27.61%), Postives = 71/163 (43.56%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVS-LLQMLSQSLY----VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +Y  L  +GEG YG V  A D      VA+KK     + +      LRE+  LL+   +++     ++R   +E +                         ++Y+V + ++TDL K + +         L    I  FLYQ+ +G+ + HS  VLHRDLKP N
Sbjct:   22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM------------------------KDVYIVQDLMETDLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 152          

HSP 2 Score: 43.1282 bits (100), Expect = 2.647e-14
Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 1
Query:  553 FLSKAIPTRLLLSGIGAPEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            FL++ + TR       APE++L S  Y+ ++D+WSVGCI AEM+  +
Sbjct:  181 FLTEYVATRWYR----APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK01_MOUSE (Mitogen-activated protein kinase 1 OS=Mus musculus GN=Mapk1 PE=1 SV=3)

HSP 1 Score: 55.4546 bits (132), Expect = 2.647e-14
Identity = 45/163 (27.61%), Postives = 71/163 (43.56%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVS-LLQMLSQSLY----VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +Y  L  +GEG YG V  A D      VA+KK     + +      LRE+  LL+   +++     ++R   +E +                         ++Y+V + ++TDL K + +         L    I  FLYQ+ +G+ + HS  VLHRDLKP N
Sbjct:   22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM------------------------KDVYIVQDLMETDLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN 152          

HSP 2 Score: 43.1282 bits (100), Expect = 2.647e-14
Identity = 20/47 (42.55%), Postives = 31/47 (65.96%), Query Frame = 1
Query:  553 FLSKAIPTRLLLSGIGAPEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            FL++ + TR       APE++L S  Y+ ++D+WSVGCI AEM+  +
Sbjct:  181 FLTEYVATRWYR----APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: KSGT_BRANA (Shaggy-related protein kinase theta OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 3.413e-14
Identity = 44/152 (28.95%), Postives = 75/152 (49.34%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHS-HGVLHRDLKPQN 485
            VG G++G V++AK   TG+ VA+KK   +   +       RE+ +++ L     VVRL                    S F+T++  +  L LV E++   + + +  + K    + +P  L+Q + YQ+C+ + + H   GV HRD+KPQN
Sbjct:  140 VGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKN------RELQIMR-LQDHPNVVRL------------------RHSFFSTTDKDELYLNLVLEFVPETVYRALKHYTK--MNQHMPIILVQLYTYQICRALNYLHRVVGVCHRDIKPQN 264          

HSP 2 Score: 43.1282 bits (100), Expect = 3.413e-14
Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE++ G+T Y+ A+DMWS GC+ AE++  Q
Sbjct:  302 APELIFGATEYTNAIDMWSGGCVMAELLLGQ 332          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 3.425e-14
Identity = 44/152 (28.95%), Postives = 73/152 (48.03%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCH-SHGVLHRDLKPQN 485
            VG G++G V++AK   TG+ VA+KK   +   +       RE+ L++++     V    C                    F+T+   +  L LV EY+   L + +  H    N R +P   ++ + YQ+ +G+A+ H + GV HRD+KPQN
Sbjct:   78 VGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKN------RELQLMRLMDHPNVVSLKHCF-------------------FSTTTRDELFLNLVMEYVPETLYRVL-KHYTSSNQR-MPIFYVKLYTYQIFRGLAYIHTAPGVCHRDVKPQN 202          

HSP 2 Score: 41.9726 bits (97), Expect = 3.425e-14
Identity = 14/31 (45.16%), Postives = 25/31 (80.65%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE++ G+T Y++++D+WS GC+ AE++  Q
Sbjct:  240 APELIFGATEYTSSIDIWSAGCVLAELLLGQ 270          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.425e-14
Identity = 42/152 (27.63%), Postives = 70/152 (46.05%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCH-SHGVLHRDLKPQN 485
            VG G++G V++AK   TG+ VA+KK   +   +       RE+  +++L     V    C                    F+T+   +  L LV EY+   + + I  H    N R +P   ++ + YQ+ + +++ H   GV HRD+KPQN
Sbjct:   81 VGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVVSLKHCF-------------------FSTTEKDELYLNLVLEYVPETVHRVI-KHYSKLNQR-MPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQN 205          

HSP 2 Score: 46.2098 bits (108), Expect = 3.425e-14
Identity = 17/31 (54.84%), Postives = 26/31 (83.87%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE++ G+T Y+TA+D+WSVGC+ AE++  Q
Sbjct:  243 APELIFGATEYTTAIDVWSVGCVLAELLLGQ 273          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK12_DANRE (Mitogen-activated protein kinase 12 OS=Danio rerio GN=mapk12 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.603e-14
Identity = 62/207 (29.95%), Postives = 90/207 (43.48%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRGSRG-ASWFH 626
            ++Y+ L++VG G YG V  A D+ TG  VA+KK       +     A RE+ LL+ +     V+ L+ V   D SL   +                 + YLV  ++ TDL K +   R       L    +Q  +YQ+ KG+ + H+ G++HRDLKP N               GL R     +  Y   +VT WYR      SW H
Sbjct:   23 DRYKDLKQVGTGAYGTVCYALDRRTGAKVAIKKLHRPFQSDLFAKRAYRELRLLKHMKHD-NVIGLVDVFTADLSLDRFH-----------------DFYLVMPFMGTDLGKLMKMER-------LSEERVQYLVYQMLKGLKYIHAAGIIHRDLKPGN-LAINEECELKILDFGLARQTDSEMTGY---VVTRWYRAPEVILSWMH 200          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: NLK_CAEBR (Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2)

HSP 1 Score: 49.2914 bits (116), Expect = 4.397e-14
Identity = 19/32 (59.38%), Postives = 29/32 (90.62%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APE+L+G+  Y+ AVD+WSVGCIFAE+++R++
Sbjct:  435 APELLMGARRYTGAVDIWSVGCIFAELLQRKI 466          

HSP 2 Score: 48.521 bits (114), Expect = 4.397e-14
Identity = 31/99 (31.31%), Postives = 51/99 (51.52%), Query Frame = 3
Query:  306 YLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF-TVPLKSYTHEIVTLWYR 599
            Y++ E + +DL K I S      P+ L    ++ F+YQ+ +G+ + H+  +LHRD+KP N               GL R + +    + THE+VT +YR
Sbjct:  343 YVLTELMQSDLHKIIVS------PQTLTIDHVKVFVYQILRGLKYLHTANILHRDIKPGN-LLVNSNCILKICDFGLARTWDSRDRLNMTHEVVTQYYR 434          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK10_MOUSE (Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 4.435e-14
Identity = 44/160 (27.50%), Postives = 68/160 (42.50%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +++Y+ L+ +G G  G V  A D    + VA+KK       +     A RE+ L++            CV H +     N  +P              ++YLV E +D +L + I           L    +   LYQ+  G+ H HS G++HRDLKP N
Sbjct:   61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------------CVNHKNIISLLNVFTPQKTL------EEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194          

HSP 2 Score: 39.2762 bits (90), Expect = 4.435e-14
Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APEV+LG   Y   VD+WSVGCI  EMV+ ++
Sbjct:  231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKI 261          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 4.435e-14
Identity = 44/160 (27.50%), Postives = 68/160 (42.50%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            +++Y+ L+ +G G  G V  A D    + VA+KK       +     A RE+ L++            CV H +     N  +P              ++YLV E +D +L + I           L    +   LYQ+  G+ H HS G++HRDLKP N
Sbjct:   61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------------CVNHKNIISLLNVFTPQKTL------EEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 194          

HSP 2 Score: 39.2762 bits (90), Expect = 4.435e-14
Identity = 18/32 (56.25%), Postives = 23/32 (71.88%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQV 696
            APEV+LG   Y   VD+WSVGCI  EMV+ ++
Sbjct:  231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKI 261          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
MK01_XENLA2.646e-1428.48Mitogen-activated protein kinase 1 OS=Xenopus laev... [more]
MK01_RAT2.647e-1427.61Mitogen-activated protein kinase 1 OS=Rattus norve... [more]
MK01_MOUSE2.647e-1427.61Mitogen-activated protein kinase 1 OS=Mus musculus... [more]
KSGT_BRANA3.413e-1428.95Shaggy-related protein kinase theta OS=Brassica na... [more]
KSG6_ARATH3.425e-1428.95Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
MSK1_MEDSA3.425e-1427.63Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
MK12_DANRE3.603e-1429.95Mitogen-activated protein kinase 12 OS=Danio rerio... [more]
NLK_CAEBR4.397e-1459.38Serine/threonine kinase NLK OS=Caenorhabditis brig... [more]
MK10_MOUSE4.435e-1427.50Mitogen-activated protein kinase 10 OS=Mus musculu... [more]
MK10_HUMAN4.435e-1427.50Mitogen-activated protein kinase 10 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
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