CF417199

Overview
NameCF417199
Unique NameCF417199
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: STK36_HUMAN (Serine/threonine-protein kinase 36 OS=Homo sapiens GN=STK36 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.550e-13
Identity = 49/160 (30.63%), Postives = 77/160 (48.12%), Query Frame = 3
Query:    6 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            MEKY  LE +GEG++G+VYK + K + Q+VALK            P   R    L+ L + + ++R L   ++   L S          F T       + +V +Y + +L + ++   K      LP   +Q+   QL   + + HSH +LHRD+KPQN
Sbjct:    1 MEKYHVLEMIGEGSFGRVYKGRRKYSAQVVALK----------FIPKLGRSEKELRNLQREIEIMRGLRHPNIVHMLDS----------FETD----KEVVVVTDYAEGELFQILEDDGK------LPEDQVQAIAAQLVSALYYLHSHRILHRDMKPQN 130          

HSP 2 Score: 26.5646 bits (57), Expect = 4.550e-13
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEM 681
            +PE L+    Y    D+WSVGCI  E+
Sbjct:  168 SPE-LVEERPYDHTADLWSVGCILYEL 193          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MK13_HUMAN (Mitogen-activated protein kinase 13 OS=Homo sapiens GN=MAPK13 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 64/199 (32.16%), Postives = 85/199 (42.71%), Query Frame = 3
Query:   33 VGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRGSRG-ASWFH 626
            VG G YG V  A DK +G+ VA+KK       E     A RE+ LL+ + Q   V+ LL V    SSL++                   + YLV  ++ TDL+K +                IQ  +YQ+ KG+ + HS GV+HRDLKP N               GL R     +  Y   +VT WYR      SW H
Sbjct:   31 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFY-----------------DFYLVMPFMQTDLQKIMGME--------FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN-LAVNEDCELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMH 199          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 6.109e-13
Identity = 40/160 (25.00%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSN---LYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            Y   + +G G++G V+ AK   T ++VA+KK   +                 +  ++ L ++R           K N+P+      F  S+  K +   L L+ EY+   + +    + K    + +P   ++ ++YQL + +A+ HS G+ HRD+KPQN
Sbjct:   36 YYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDK----------------RFKNRELQIMR-----------KLNHPNIVKLKYFFYSSGDKKDELYLNLILEYVPETVYRVARHYSK--QRQSIPMIYVKLYMYQLLRSLAYIHSIGICHRDIKPQN 166          

HSP 2 Score: 38.1206 bits (87), Expect = 6.109e-13
Identity = 13/31 (41.94%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE++ G+T+Y+ ++D+WS G + AE++  Q
Sbjct:  204 APELIFGATNYTNSIDVWSAGTVIAELLLGQ 234          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 7.932e-13
Identity = 40/160 (25.00%), Postives = 74/160 (46.25%), Query Frame = 3
Query:   15 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSN---LYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQN 485
            Y   + +G G++G V+ AK   T ++VA+KK   +                 +  ++ L ++R           K N+P+      F  S+  K +   L L+ EY+   + +    + K    + +P   ++ ++YQL + +A+ HS G+ HRD+KPQN
Sbjct:   36 YYDQKVIGNGSFGVVFLAKLSTTNEMVAIKKVLQDK----------------RFKNRELQIMR-----------KLNHPNIVKLKYFFYSSGEKKDELYLNLILEYVPETVYRVARHYSK--QRQQIPMIYVKLYMYQLLRSLAYIHSIGICHRDIKPQN 166          

HSP 2 Score: 38.1206 bits (87), Expect = 7.932e-13
Identity = 13/31 (41.94%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  601 APEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            APE++ G+T+Y+ ++D+WS G + AE++  Q
Sbjct:  204 APELIFGATNYTNSIDVWSAGTVMAELLLGQ 234          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CSK2A_MAIZE (Casein kinase II subunit alpha OS=Zea mays GN=ACK2 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.953e-13
Identity = 52/203 (25.62%), Postives = 85/203 (41.87%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLD-TDLKKFIDSHRKGPNPRPLPPTL----IQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRG 602
            + YE + KVG G Y +V++  +    +   +K  +    ++       RE+ +LQ L     +V+LL +        S  PS                  L+FEY++ TD K              L PTL    I+ ++Y+L K + +CHS G++HRD+KP N               GL   F  P K Y   + + +++G
Sbjct:   32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPNIVKLLDIVR---DQHSKTPS------------------LIFEYVNNTDFKV-------------LYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKG 194          

HSP 2 Score: 36.1946 bits (82), Expect = 7.953e-13
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            PE+L+    Y  ++DMWS+GC+FA M+ R+
Sbjct:  195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CSK23_ARATH (Probable casein kinase II subunit alpha OS=Arabidopsis thaliana GN=At2g23080 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 7.953e-13
Identity = 51/202 (25.25%), Postives = 87/202 (43.07%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTL----IQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRG 602
            + YE + KVG G Y +V++ K+  T +   +K  +    ++       RE+ +LQ L     +V+L  +   + S     PS                  LVFE++++     +D        + L PTL    I+ ++Y+L K +  CHS G++HRD+KP N               GL   F  P K Y   + + +++G
Sbjct:   32 DDYEVVRKVGRGKYSEVFEGKNVNTNERCVIKILKPVKKKK-----IKREIKILQNLCGGPNIVKLYDIVRDEHS---KTPS------------------LVFEFVNS-----VDF-------KVLYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHQLRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKG 194          

HSP 2 Score: 36.1946 bits (82), Expect = 7.953e-13
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            PE+L+    Y  ++DMWS+GC+FA M+ R+
Sbjct:  195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: CSK21_ARATH (Casein kinase II subunit alpha-1 OS=Arabidopsis thaliana GN=CKA1 PE=1 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 7.953e-13
Identity = 56/209 (26.79%), Postives = 89/209 (42.58%), Query Frame = 3
Query:    9 EKYEKLEKVGEGTYGKVYK-----AKDKATGQLVA-LKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLD-TDLKKFIDSHRKGPNPRPLPPTL----IQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRG 602
            + YE + KVG G Y +V++     +K+K   +++  +KK ++            RE+ +LQ L     +V+LL V        S  PS                  L+FEY++ TD K              L PTL    I+ ++Y+L K +  CHS G++HRD+KP N               GL   F  P K Y   + + +++G
Sbjct:   32 DDYEVVRKVGRGKYSEVFEGINVNSKEKCIIKILKPVKKKKIR-----------REIKILQNLCGGPNIVKLLDVVR---DQHSKTPS------------------LIFEYVNSTDFKV-------------LYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKG 194          

HSP 2 Score: 36.1946 bits (82), Expect = 7.953e-13
Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  604 PEVLLGSTHYSTAVDMWSVGCIFAEMVKRQ 693
            PE+L+    Y  ++DMWS+GC+FA M+ R+
Sbjct:  195 PELLVDLQDYDYSLDMWSLGCMFAGMIFRK 224          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 62/211 (29.38%), Postives = 88/211 (41.71%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRGSRGASWFHSLLHCC 644
            KY  ++ +G G YG V  + +  T + VA+KK     +        LRE+ LL+ L             H +     +   P    +F        ++YLV+E +DTDL + I S +   N         Q FL+QL +G+ + HS  +LHRDLKP N               GL RA     +  T  +VT WYR          LL CC
Sbjct:   31 KYMPIKPIGRGAYGVVCSSVNSDTNEKVAIKKIHNVYENRIDALRTLRELKLLRHL------------RHENVIALKDVMMPIHKMSF-------KDVYLVYELMDTDLHQIIKSSQVLSNDH------CQYFLFQLLRGLKYIHSANILHRDLKPGN-LLVNANCDLKICDFGLARASNTKGQFMTEYVVTRWYRAP-------ELLLCC 208          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MPK16_ORYSJ (Mitogen-activated protein kinase 16 OS=Oryza sativa subsp. japonica GN=MPK16 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 63/209 (30.14%), Postives = 89/209 (42.58%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF---TVPLKSYTHEIVTLWYRGSRGASWFHS 629
            +YE  E VG+G+YG V  A D  TG  VA+KK     +        LRE+ LL++L             H D     +   P S   F        ++Y++FE +++DL + I ++        L P   Q FLYQL +G+ + H+  V HRDLKP+N               GL R     T     +T  + T WYR       F S
Sbjct:   21 RYEVTEVVGKGSYGVVAAAVDTHTGGRVAIKKINDVFEHISDATRILREIKLLRLL------------RHPDIVEIKHIMLPPSRREF-------RDIYIIFELMESDLHQVIKAN------DDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKN-ILANADCKVKICDFGLARVSFDDTPSAIFWTDYVATRWYRAPELCGSFFS 203          
BLAST of CF417199 vs. ExPASy Swiss-Prot
Match: MPK15_ORYSJ (Mitogen-activated protein kinase 15 OS=Oryza sativa subsp. japonica GN=MPK15 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 64/209 (30.62%), Postives = 92/209 (44.02%), Query Frame = 3
Query:   12 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGR-AF--TVPLKSYTHEIVTLWYRGSRGASWFHS 629
            +Y+  E +G+G+YG V  A D  TG+ VA+KK     +        LRE+ LL++L             H D     +   P S   F        ++Y+VFE +++DL + I ++        L P   Q FLYQL +G+ + H+  V HRDLKP+N               GL R AF  T     +T  + T WYR       F S
Sbjct:   12 RYKIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLL------------RHPDIVEIKHILLPPSRREF-------KDIYVVFELMESDLHQVIKANDD------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN-ILANADCKLKICDFGLARVAFSDTPTAIFWTDYVATRWYRAPELCGSFFS 194          
The following BLAST results are available for this feature:
BLAST of CF417199 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
STK36_HUMAN4.550e-1330.63Serine/threonine-protein kinase 36 OS=Homo sapiens... [more]
MK13_HUMAN5.202e-1332.16Mitogen-activated protein kinase 13 OS=Homo sapien... [more]
GSK3_CAEBR6.109e-1325.00Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
GSK3_CAEEL7.932e-1325.00Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
CSK2A_MAIZE7.953e-1325.62Casein kinase II subunit alpha OS=Zea mays GN=ACK2... [more]
CSK23_ARATH7.953e-1325.25Probable casein kinase II subunit alpha OS=Arabido... [more]
CSK21_ARATH7.953e-1326.79Casein kinase II subunit alpha-1 OS=Arabidopsis th... [more]
MPK1_ARATH8.874e-1329.38Mitogen-activated protein kinase 1 OS=Arabidopsis ... [more]
MPK16_ORYSJ8.874e-1330.14Mitogen-activated protein kinase 16 OS=Oryza sativ... [more]
MPK15_ORYSJ8.874e-1330.62Mitogen-activated protein kinase 15 OS=Oryza sativ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-129 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417199 ID=CF417199; Name=CF417199; organism=Citrus sinensis; type=EST; length=697bp
AGAGGATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTAC
GGGAAAGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCT
GAAGAAAACAAGACTCGAAATGGATGAAGAAGGCATCCCCCCGACCGCTC
TCCGCGAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTC
CGCCTCCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCC
CAGCCCCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTA
ATCTCTATCTCGTGTTTGAATACCTCGACACCGATCTAAAGAAATTCATC
GACTCGCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCAT
TCAGAGCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCC
ACGGTGTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAG
GACAAGGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCAC
CGTTCCTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGG
GCTCCCGAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACAT
GTGGTCCGTTGGTTGCATTTTCGCTGAGATGGTTAAAAGGCAGGTTT
back to top