CF417210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRAB (30S ribosomal protein S15P/S13e OS=Pyrococcus abyssi GN=rps15p PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.075e-26 Identity = 63/133 (47.37%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 WL+ + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LIK+AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 25 WLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLV 157
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METM5 (30S ribosomal protein S15P/S13e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps15p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.934e-26 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W+ +S++++E I + AK G + IG ILRD +G+ VK +TG + I+K G E+PEDL++L+KKA+ +R HLE N +D S L L+ES+I RL +YY+ TK LP W+Y TA LV Sbjct: 25 WVSMSAEEIEAKIVEMAKDGKQSAIIGNILRDMYGVPNVKLITGKSVSSIMKEAGFYAEVPEDLFNLMKKAINLRNHLENNPRDTHSTVGLKLIESKIRRLVKYYRGTKVLPAKWRYSPETARLLV 150
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_ARCFU (30S ribosomal protein S15P/S13e OS=Archaeoglobus fulgidus GN=rps15p PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.036e-25 Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKY 355 W+ +S ++VE + + +G PS IG+ILRD +GI VK VTG KI +ILK HG+ + PEDL LIKKA+ +R HLE +RKDK ++ L L+E++I RL+ YYK+ LP WKY Sbjct: 25 WVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSYYKEKGVLPADWKY 141
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRFU (30S ribosomal protein S15P/S13e OS=Pyrococcus furiosus GN=rps15p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.353e-25 Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W++ + +++E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ TA LV Sbjct: 25 WVEYTVEEIENLVVKLRKEGYSTAMIGTILRDQYGIPSVKLFKDPDNPNRNLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKNWRYDPETAKLLV 157
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METMA (30S ribosomal protein S15P/S13e OS=Methanosarcina mazei GN=rps15p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25 Identity = 58/126 (46.03%), Postives = 81/126 (64.29%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W KI + +V K+G++ S+IG+ILRD +G+ K VTG KI ILK + +AP +PEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 25 WCKIGADEVTTITLDLWKQGVSTSEIGMILRDRYGVPDAKLVTGKKITTILKENNVAPNLPEDLTNLIVKALGLRKHLSTNKKDVHNKRALNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METLZ (30S ribosomal protein S15P/S13e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps15p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25 Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 2 SWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 385 +W +++E I + K GLT +QIG++LRD HG+ VK TG +I I++ + L +IPEDL +L+ KA+ +RKHLE+NRKD +K +L L E+++ RL +YY TK+LP W Y+ TA L++ Sbjct: 24 AWSNSDVKEIEGKIVELRKAGLTCAQIGLVLRDKHGVPNVKLATGKRINAIVRENDLDTDIPEDLRNLMHKALMMRKHLEQNRKDLHNKRQLQLTEAKVRRLVKYYVGTKRLPLGWVYKPETAEILLS 151
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_PYRHO (30S ribosomal protein S15P/S13e OS=Pyrococcus horikoshii GN=rps15p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25 Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSK-------ILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 WL + +D+E+ + K K+G + + IG ILRD +GI VK I RIL+ HGLAPEIPEDL LI++AV +RKHLE++ KD S L L+ES+I RL +YYK+ KLP W+Y+ A LV Sbjct: 25 WLDYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIRRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPRDWRYDPEQAKLLV 157
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METAC (30S ribosomal protein S15P/S13e OS=Methanosarcina acetivorans GN=rps15p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.015e-25 Identity = 55/126 (43.65%), Postives = 82/126 (65.08%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 W KI + +V + K+G++ ++IG++LRD +G+ K +TG K+ ILK + +AP IPEDL +LI KA+ +RKHL N+KD +K L L ES+I RL +YYK+ K LP W Y+ TA ++ Sbjct: 25 WCKIGADEVTTIVLDLWKQGVSTAEIGMVLRDRYGVPDAKLITGKKVTTILKENNVAPNIPEDLTNLIVKALGLRKHLSVNKKDVHNKRSLNLTESKIRRLVKYYKQEKVLPRDWFYKPETAEMMI 150
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METHJ (30S ribosomal protein S15P/S13e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps15p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.354e-24 Identity = 52/127 (40.94%), Postives = 83/127 (65.35%), Query Frame = 2 Query: 5 WLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 385 W + + I ++G + ++IG+++RD +G+ VK TG KI +IL+ + LA EIPEDL +LI+KA+ +RKHL N++D +K +L+L ES++ RL +YY +KKLP W Y+ TA L++ Sbjct: 25 WSNTDKEAIIKQIVDLRRQGSSTAEIGLVMRDKYGVPSVKLATGKKITQILRDNDLASEIPEDLRNLIEKALGMRKHLAENKRDIHNKRQLMLTESKVRRLVKYYVSSKKLPKDWVYKPETAEILLS 151
BLAST of CF417210 vs. ExPASy Swiss-Prot
Match: RS15_METBU (30S ribosomal protein S15P/S13e OS=Methanococcoides burtonii (strain DSM 6242) GN=rps15p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 9.699e-24 Identity = 53/127 (41.73%), Postives = 80/127 (62.99%), Query Frame = 2 Query: 2 SWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV 382 +W +++++ + K+G + S IG++LRD++G+ VK TG K+ IL+ + P +PEDLY+LI KA+ +RKHL N KD +K L ES+I RL +YY+ TK LP WKY+ TA L+ Sbjct: 24 AWSTATTEEITKVVLDLWKQGNSTSVIGMVLRDNYGVPDVKLATGKKVTEILRDNSEEPNVPEDLYNLIVKAIGLRKHLVVNNKDVHNKRSLQSAESKIRRLVKYYQSTKVLPIDWKYKPETAEMLI 150 The following BLAST results are available for this feature:
BLAST of CF417210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417210 ID=CF417210; Name=CF417210; organism=Citrus sinensis; type=EST; length=643bpback to top |