CF417212
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_CAPBU (Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.565e-27 Identity = 33/45 (73.33%), Postives = 34/45 (75.56%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I + DLLN GETY V LTE GTYSFYC PHQGAGMVG VTVN Sbjct: 55 ISMDENDLLNAAGETYEVALTEAGTYSFYCAPHQGAGMVGKVTVN 99 HSP 2 Score: 70.8626 bits (172), Expect = 5.565e-27 Identity = 34/49 (69.39%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 288 IEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 IEVLLGG DG LA VP+ FS+ GEKIV N AGFPH+ FD DEIPSG Sbjct: 1 IEVLLGGGDGSLAFVPNDFSIAKGEKIVFKNNAGFPHNVVFDEDEIPSG 49
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_VICFA (Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.319e-25 Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I + EDLLN PGETY+V L KGTY FYC PHQGAGMVG VTVN Sbjct: 55 ISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 99 HSP 2 Score: 65.0846 bits (157), Expect = 1.319e-25 Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 288 IEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 +EVLLG DG LA VP+SF V +G+ IV N AGFPH+ FD DEIPSG Sbjct: 1 VEVLLGASDGGLAFVPNSFEVSAGDTIVFKNNAGFPHNVVFDEDEIPSG 49
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.166e-23 Identity = 31/43 (72.09%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 +S + LNG GETY VTLTEKGTY FYC PH GAGM G VTVN Sbjct: 55 ISQPEYLNGAGETYEVTLTEKGTYKFYCEPHAGAGMKGEVTVN 97 HSP 2 Score: 62.003 bits (149), Expect = 1.166e-23 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 3 Query: 291 EVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 EV LG DDG L PSSF+V +GEKI N AGFPH+ FD DE+P+G Sbjct: 2 EVKLGSDDGGLVFSPSSFTVAAGEKITFKNNAGFPHNIVFDEDEVPAG 49
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 2.754e-22 Identity = 29/42 (69.05%), Postives = 33/42 (78.57%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTV 583 +S ED L+G GE++ VTLTEKGTY FYC PH GAGM G VTV Sbjct: 55 ISQEDYLDGAGESFTVTLTEKGTYKFYCEPHAGAGMKGEVTV 96 HSP 2 Score: 60.4622 bits (145), Expect = 2.754e-22 Identity = 29/48 (60.42%), Postives = 32/48 (66.67%), Query Frame = 3 Query: 291 EVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 EV LG DDG L PSSFSV GE I N AGFPH+ FD DE+P+G Sbjct: 2 EVKLGADDGALVFSPSSFSVAKGEGISFKNNAGFPHNIVFDEDEVPAG 49
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.584e-22 Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 2 Query: 452 IXVSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 I +S EDLLN PGETY V L +KGTY F+C PHQG GM G VTVN Sbjct: 55 ISMSEEDLLNAPGETYVVKLDKKGTYRFFCAPHQGIGMSGIVTVN 99 HSP 2 Score: 57.3806 bits (137), Expect = 3.584e-22 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 3 Query: 288 IEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 +EVL+GG G LA +P+ V +GE+IV N AGFPH+ FD D +P+G Sbjct: 1 VEVLMGGSGGELAFIPNELQVNAGEQIVFKNNAGFPHNVIFDEDAVPAG 49
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.290e-21 Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 +S E+ LN PGET++VTLT GTY FYC PH GAGMVG VTVN Sbjct: 112 ISQEEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154 HSP 2 Score: 55.4546 bits (132), Expect = 1.290e-21 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 3 Query: 291 EVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 EVLLG + G L P+ F+V SGE I N AGFPH+ FD D +PSG Sbjct: 59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSG 106
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.290e-21 Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 +S E+ LN PGET++VTLT GTY FYC PH GAGMVG VTVN Sbjct: 112 ISQEEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154 HSP 2 Score: 55.4546 bits (132), Expect = 1.290e-21 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 3 Query: 291 EVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 EVLLG + G L P+ F+V SGE I N AGFPH+ FD D +PSG Sbjct: 59 EVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSG 106
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.054e-20 Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 ++ ED LNGP E++++T GTY FYC PHQGAGM G VTV+ Sbjct: 126 INHEDYLNGPNESFSITFKTPGTYEFYCEPHQGAGMKGVVTVS 168 HSP 2 Score: 59.6918 bits (143), Expect = 1.054e-20 Identity = 36/105 (34.29%), Postives = 47/105 (44.76%), Query Frame = 3 Query: 126 GLKAG--ATPARVVGSTMKASASAVPKLSIKATLKDVGXXXXXXXXXXXXXXXXXXIEVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 GLKA A PAR+ +++ A V + LK VG V +GGDDG L P SV +GE + N GFPH+ FD D +P+G Sbjct: 16 GLKAETKAAPARLSSTSVVRMAPVVRASASSDALKTVGKALLAASSSLLLVASANAATVKMGGDDGALGFYPKDISVAAGESVTFVNNKGFPHNVVFDEDAVPAG 120
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.029e-20 Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTVN 586 +S E+ L PGET++VTLT GTY FYC PH GAGMVG VTVN Sbjct: 113 ISQEEYLTAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 155 HSP 2 Score: 53.1434 bits (126), Expect = 3.029e-20 Identity = 24/48 (50.00%), Postives = 31/48 (64.58%), Query Frame = 3 Query: 291 EVLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 +VLLG + G L P+ FSV +GE I N AG+PH+ FD D +PSG Sbjct: 60 DVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSG 107
BLAST of CF417212 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 9.288e-19 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 2 Query: 458 VSTEDLLNGPGETYAVTLTEKGTYSFYCXPHQGAGMVGXVTV 583 +S +D LN PGETY+V LT G Y +YC PHQGAGMVG + V Sbjct: 103 ISRDDYLNAPGETYSVKLTAAGEYGYYCEPHQGAGMVGKIIV 144 HSP 2 Score: 51.9878 bits (123), Expect = 9.288e-19 Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 3 Query: 294 VLLGGDDGCLAXVPSSFSVXSGEKIVXXNXAGFPHDDXFDXDEIPSG 434 V LG D G L VP + ++ SGE + N AGFPH+ FD D IPSG Sbjct: 51 VKLGADSGALEFVPKTLTIKSGETVNFVNNAGFPHNIVFDEDAIPSG 97 The following BLAST results are available for this feature:
BLAST of CF417212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417212 ID=CF417212; Name=CF417212; organism=Citrus sinensis; type=EST; length=684bpback to top |