CF417224

Overview
NameCF417224
Unique NameCF417224
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: ALD1_STAA8 (Putative aldehyde dehydrogenase SAOUHSC_02363 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02363 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query:   18 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 251
            +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  394 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: ALD1_STAA3 (Putative aldehyde dehydrogenase SAUSA300_2076 OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_2076 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query:   18 EEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 251
            +EAI +ANDT  GLA Y+   + +   +V+ ++E G V +NE     ++ PFGG KQSGLGRE   YG++EFLE+K +
Sbjct:  394 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEAGRKPDL-PFGGYKQSGLGREWGDYGIEEFLEVKSI 470          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: AL9A1_RAT (4-trimethylaminobutyraldehyde dehydrogenase OS=Rattus norvegicus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 266
            F+TE E +  ANDT  GLAA +FT ++QR  RV+  L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  402 FETEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYV 251
            F +E+EAI +ANDT  GL A + + +L R  R+++ALE G V VN        AP+GG K+SG GRE  ++G++ +L IK V
Sbjct:  404 FGSEDEAIELANDTQYGLGAAVLSKDLDRCERITKALEVGAVWVNCSQPCFTQAPWGGTKRSGFGRELGEWGIENYLNIKQV 485          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: AMNC_PSESP (2-aminomuconic 6-semialdehyde dehydrogenase OS=Pseudomonas sp. GN=amnC PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCL 257
            F +E E I  ANDT  GLAA I+T NL R  RVSE +  G+  VN   +     PFGG   SG+GREG  + ++ + E+  VC+
Sbjct:  399 FDSESEVIRRANDTRYGLAATIWTTNLSRAHRVSELMRVGISWVNTWFLRDLRTPFGGAGLSGIGREGGMHSLNFYSELTNVCV 482          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: AL9A1_BOVIN (4-trimethylaminobutyraldehyde dehydrogenase OS=Bos taurus GN=ALDH9A1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 266
            F TE E +  ANDT  GLAA +FT ++QR  RV   L+ G+  +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  402 FDTEAEVLERANDTTFGLAAGVFTRDIQRAHRVVAELQAGMCFINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: LADH_METVS (Lactaldehyde dehydrogenase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0796 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 3
Query:    9 KTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEG-LISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLGDM 266
            K +E A+++AN++  GL A IFTN++ +  + +  LEYG V VN       +  PFGG+K+SGLG+EG KY ++E  E K V + +M
Sbjct:  379 KDDEHALNIANNSKYGLQAGIFTNDINKAMKFANKLEYGGVIVNGSPTFRKDNMPFGGIKKSGLGKEGIKYAVEEMCETKTVVIHNM 465          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: BETB_RHOSK (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 260
            F+TEEEAI  AN T+ GLAA +FT +L R  RV   L+ G   +N   ++   APFGGVK SG+GRE  +  ++ + ++K V +G
Sbjct:  391 FETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSVYVG 475          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVCLG 260
            F+TEEEAI  AN T+ GLAA +FT +L R  RV   L+ G   +N   ++   APFGGVK SG+GRE  +  ++ + ++K V +G
Sbjct:  391 FETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSVYVG 475          
BLAST of CF417224 vs. ExPASy Swiss-Prot
Match: AL9A1_MOUSE (4-trimethylaminobutyraldehyde dehydrogenase OS=Mus musculus GN=Aldh9a1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 3
Query:    6 FKTEEEAIHMANDTNAGLAAYIFTNNLQRTWRVSEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEFLEIKYVC--LGDM 266
            F TE E +  ANDT  GLAA +FT ++QR  RV+  L+ G   +N   +S    PFGG K+SG GRE  +  ++ + ++K VC  +GD+
Sbjct:  402 FGTEAEVLERANDTTFGLAAGVFTRDIQRAHRVAAELQAGTCYINNYNVSPVELPFGGYKKSGFGRENGRVTIEYYSQLKTVCVEMGDV 490          
The following BLAST results are available for this feature:
BLAST of CF417224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
ALD1_STAA82.044e-1246.15Putative aldehyde dehydrogenase SAOUHSC_02363 OS=S... [more]
ALD1_STAA32.044e-1246.15Putative aldehyde dehydrogenase SAUSA300_2076 OS=S... [more]
AL9A1_RAT2.044e-1241.574-trimethylaminobutyraldehyde dehydrogenase OS=Rat... [more]
BADH_AMAHP3.486e-1245.12Betaine aldehyde dehydrogenase, chloroplastic OS=A... [more]
AMNC_PSESP3.486e-1244.052-aminomuconic 6-semialdehyde dehydrogenase OS=Pse... [more]
AL9A1_BOVIN3.486e-1241.574-trimethylaminobutyraldehyde dehydrogenase OS=Bos... [more]
LADH_METVS4.553e-1242.53Lactaldehyde dehydrogenase OS=Methanococcus vannie... [more]
BETB_RHOSK4.553e-1244.71Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_RHOS14.553e-1244.71Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
AL9A1_MOUSE4.553e-1241.574-trimethylaminobutyraldehyde dehydrogenase OS=Mus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-154 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-002_H1 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417224 ID=CF417224; Name=CF417224; organism=Citrus sinensis; type=EST; length=709bp
TATGCTTCAAAACTGAGGAGGAAGCTATCCATATGGCCAATGATACCAAT
GCAGGGTTAGCTGCTTATATATTTACAAACAATCTTCAACGTACATGGCG
TGTCTCTGAAGCTCTTGAATATGGACTCGTCGGTGTTAATGAAGGATTAA
TTTCAACAGAGGTGGCTCCTTTTGGTGGTGTTAAACAATCTGGTCTTGGA
CGGGAAGGTTCAAAGTATGGGATGGATGAATTCCTGGAAATAAAATATGT
GTGCTTGGGAGACATGAACAGAAAATGATGGGCCAGTTGTGTACCTGTAT
GTTACCGGGCTTATGGAGAAAGAAGGAAGGAGCCTGTAGTACTGCCTTTG
AACTGTATTTTGAAGACGGATTGGAATAGTGTGAGCCTCAAGCGTTTGGA
TGTGGAGGTAGTAGTGAGCCATAGTTGGTTTGCTATTGATACCCCATGTA
CATAAATAAGTTTGCAAAATGGAACTTGAATGTCTAGTAGTGAGCCATAG
GTGGTTTGCTATTGATACCCCATGTACATAAATAAGTTTGCAAAATGGAA
CTTGNAATGTCTGGTGTCATAAAGATTTTGCCGTCAACACCCAAAACCTA
ATGGGAAAGAACTTTTCTTCTTTTGGTATCATTACATTTTCCCNCGGGGT
TATGTTTCTCTTGATCAGATATGAATCAAGATTCCATGGTATTTATAACC
CCCCATCTT
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