CF417233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.620e-37 Identity = 72/178 (40.45%), Postives = 104/178 (58.43%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 + +E+ AFLA + +T+ G+ A GP AWGLCY E++P SYCD + K +PC PG Y+GRG I I WN+NYG G+AL D L +PE + + +AF+ A+W WMTP + ++PS H VG ++P D + R FG NI+ G C + +NN + Y Y ++G Sbjct: 100 RKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQ-WPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTP-RDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLG 275
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 8.065e-37 Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + KE+ AF +T+ G+ A GP +WG C+ E +P+ YC+ S T+PC G YYGRG + + WNYNYG G A+ DLLN+P+ + +A +AF+AAIW WMT + +PS H G W+P+ D + R P +G NI+ G CG+G + + + Y Y ++ G P Sbjct: 132 GDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT-AQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNP 314
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.065e-37 Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + +E+ AFL +T+ G+ A GP +WG C+ E +P YC S ++ PC PG +YYGRG I + +N+NYG G A+ DLL++P+ + +AT++F+ A+W WMTP + ++PS+HD G W P+ D + R P +G NI+ G CG G D + N + Y Y G Sbjct: 135 GNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP-QGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFG 314
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.053e-36 Identity = 69/178 (38.76%), Postives = 103/178 (57.87%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 + +E+ AFL +T+ G+ A GP +WG C+ E+ + SYC S ++ PC P +Y+GRG I + +NYNYG GEA+ DLLN+PE + + ++F+ A+W WMTP + +PS HD G W P+ D + R P +G NI+ G CG G D + N + Y Y D++G Sbjct: 137 RKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEW--PCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTP-QSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLG 311
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 6.828e-36 Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + +EI AF A +T+ G+ A GP AWG C+ E YC S ++ PC PG +Y+GRG I I NYNYG G A+ DLLN+P+ + + ++F++A+W WMTP + +PS HD +G W+P+ D + R P FG NI+ G CG+G + + + Y Y ++G P Sbjct: 126 GDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSP 308
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36 Identity = 71/181 (39.23%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 + +EI AFLA +T+ G+ A GP AWG C+ E YC S ++ PC PG +Y+GRG I I NYNYG G A+ DLLN+P+ + + ++F++AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y ++G P Sbjct: 124 RKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSP 301
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36 Identity = 71/181 (39.23%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 + +EI AFLA +T+ G+ A GP AWG C+ E YC S ++ PC PG +Y+GRG I I NYNYG G A+ DLLN+P+ + ++ ++F++AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y ++G P Sbjct: 120 RKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSP 297
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.917e-36 Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + +EI AF A +T+ G+ A GP AWG C+ E YC S ++ PC PG +Y+GRG I I NYNYG G A+ DLLN+P+ + + ++F++A+W WMTP + +PS HD +G W+P+ D + R P FG NI+ G CG+G + + + Y Y ++G P Sbjct: 121 GDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSP 303
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.165e-35 Identity = 70/181 (38.67%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 + +EI AF A +T+ G+ A GP AWG C+ E YC S ++ PC PG +Y+GRG I I NYNYG G A+ DLLN+P+ + ++ ++F++AIW WMTP + +PS HD G W+P+ D + R P FG NI+ G CG G + + + Y Y ++G P Sbjct: 118 RKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSP 295
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.987e-35 Identity = 69/181 (38.12%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 + +EI AF A +T+ G+ A GP AWG C+ E YC S ++ PC PG +Y+GRG I I NYNYG G A+ DLLN+P+ + + ++F+ A+W WMTP + +PS HD +G W P+ D + R P FG NI+ G CG+G + + + + Y Y ++G P Sbjct: 130 RKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTP 307 The following BLAST results are available for this feature:
BLAST of CF417233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417233 ID=CF417233; Name=CF417233; organism=Citrus sinensis; type=EST; length=663bpback to top |