CF417233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.424e-33 Identity = 65/177 (36.72%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLV 546 + +E+ AF A +TS + P WG C +E++P+ YCD K +YPC A+YYGRG + + WNYNYG G L +LL+ PE + + L+FEAA+W WM P PS H+ G W P++ D + R P FG NI+ C + N + +YL Y D++ Sbjct: 114 RKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCV--ADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDML 288
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.859e-33 Identity = 65/178 (36.52%), Postives = 97/178 (54.49%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 + +++ AFLA +T+ G+ A G AWG C+ E + YC S ++ PC PG YYGRG I + NYNYG G A+ DLL +P+ + + T++F+ A+W WMT + +PS+H G W P+ D + R P FG NI+ G CG G + + + Y Y D++G Sbjct: 76 RKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQW--PCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMT-AQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLECGHGQDSRVADRIGFYKRYCDILG 250
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.428e-33 Identity = 72/178 (40.45%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 + +E+ AFLA TS GGP +WG CY + +C + ++ PC PG Y+ RG + I +NYNYGA GEA+ ADLL +PE + + T+AF+ A+W WMT SQPS H G W PT D+ + R P +G T NIL G C G+ A + V+ Y Y D++G Sbjct: 148 RKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLG 314
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.428e-33 Identity = 72/178 (40.45%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 + +E+ AFLA TS GGP +WG CY + +C + ++ PC PG Y+ RG + I +NYNYGA GEA+ ADLL +PE + + T+AF+ A+W WMT SQPS H G W PT D+ + R P +G T NIL G C G+ A + V+ Y Y D++G Sbjct: 148 RKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLG 314
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33 Identity = 66/182 (36.26%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLV 546 G+ + +E+ AFLA +T+ G+ A G AWG C+ E + +YC S ++ PC PG YYGRG I + NYNYG G A+ DLL +P+ + + T++F+ A+W WMT + +PS+H G W P+ D + R P FG NI+ G CG G + + + Y Y D++ Sbjct: 126 GSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDIL 304
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26 Identity = 62/182 (34.07%), Postives = 89/182 (48.90%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQG-DIDAMNNIVSHYLYYLDL 543 G + +E+ AF +T+ G+ A GP AWG C +E++PS YYGRG I + YNY G+AL DL+N+P+ + + +AF AIW WMT + +PS HD W P+ +D S R P +G NI+ G CG+G D + V +Y Y D+ Sbjct: 72 GNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMT-AQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDM 236
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.995e-24 Identity = 58/180 (32.22%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCW 555 + +E+ AFLA +T+ G+ A GP Y ++Y+GRG I I +NYNYGA G+A+ DLL +P+ + + T+ F+ A+W WMTP + +PS+HD G W P+ D + R P +G NI+ G CG+G +++ YY D + C+ Sbjct: 44 RKREVAAFLAQTSHETTGGWPTAPDGP-------------------------YELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTP-QSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQ---ESHVADRIGYYKDNLDCY 194
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22 Identity = 59/186 (31.72%), Postives = 93/186 (50.00%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + KEI AF +T+ G ++ GP A G C+ E + G YYGRG I + NY G+A++ DL+N+P+ + +AT++F+ AIW WMTP + ++PS HD G W P+ DT + R P +G NI+ G CG+G + + + +Y + ++ P Sbjct: 72 GDDTARKKEIAAFFGQTSHETTGGT-LSPDGPYAGGYCFLREGNQM----------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTP-QGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIECGKGQNARVEDRIGYYRRNVSIMNVAP 239
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.131e-22 Identity = 57/176 (32.39%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 22 KEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 +E+ AF +T+ G + WG C+ E++ + S YYGRG I + NY A G AL DL+ +P+ + +A ++F+ AIW WMT + ++PS HD +G W P+ DT + R P +G NI+ G CG G DA + + +Y Y D++G Sbjct: 86 RELAAFFGQTSHETTGGTR-GSSDQFQWGYCFKEEINKATS---------------PPYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMT-AQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLG 244
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22 Identity = 57/186 (30.65%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + KEI AF +T+ G ++ GP A G C+ E + G+ +YGRG I + NY G+A+ DL+N+P+ + +AT++F+ AIW WMT + ++PS HD G W P+ D + R P +G NI+ G CG+G + + + Y Y ++ P Sbjct: 65 GDDTARKKEIAAFFGQTSHETTGG-SLSADGPFAGGYCFVREGNQM----------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT-AQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAP 232 The following BLAST results are available for this feature:
BLAST of CF417233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417233 ID=CF417233; Name=CF417233; organism=Citrus sinensis; type=EST; length=663bpback to top |