CF417233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.633e-21 Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + KEI AF +T+ G + P G C+ + S YYGRG I + NY G A++ DL+N+P+ + +AT++F+ AIW WMTP + ++PS+HD +G+W P+ D + R P G NI+ G CG G A+ + + +Y Y ++ P Sbjct: 73 GDDTARRKEIAAFFGQTSHETTGGS--LSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTP-QDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIECGVGPNAAVEDRIGYYRRYCGMLNVAP 238
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.132e-21 Identity = 57/186 (30.65%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + KEI AF +T+ G + P G C+ + S YYGRG I + NY G A+ +L+N+P+ + +AT++F+ AIW WMTP + ++PS+HD +G W P+ D + R P +G NI+ G CG G DA+ + + +Y Y ++ P Sbjct: 73 GDDTARRKEIAAFFGQTSHETTGGS--LSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTP-QDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAP 238
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19 Identity = 56/184 (30.43%), Postives = 96/184 (52.17%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQS-YCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + +E+ AFLAH+ TS G P AWGLC+ + + +++ +C S +PC G +Y RG I + N+NYG G+A+ DL+ +P+ +E++ ++F+ A+W WM+ ++PS HD + ++ + R PN G NI+ G D ++ + Y Y D++G Sbjct: 174 GDVATRKREVAAFLAHISQATS-GERSDVENPHAWGLCHINTTTVTENDFCTSS---DWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQ-HDNKPSCHDIVL------NANSAANRIPNKGVIGNII--SRAFGHDDFAVRSSSIGFYKRYCDMLG 344
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19 Identity = 60/192 (31.25%), Postives = 89/192 (46.35%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWPRAGRT 573 G+ D +EI AF AH +T CY E+ PS++YCD++ +PC G YYGRG + I WN+NYG G+++ D L P+ + ++ LAF+ A+W W V HDAFV G FG T+ + G C + A++N V++Y + G P + T Sbjct: 113 GSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNV-------HDAFVS-------------GQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLT 270
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.905e-19 Identity = 58/186 (31.18%), Postives = 81/186 (43.55%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G+++ +EI AF AH +T CY E++ S +YCD + K +PC G +YYGRG + I WNYNYG G A+ D L P + ++A +AF+AA+W WM V P FG T + CG + MN V +Y Y +G P Sbjct: 114 GSQVQGKREIAAFFAHATHETG-------------HFCYISEINKSNAYCDPT-KRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQ----------------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDP 263
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 56/178 (31.46%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYY 534 GT+++ +EI AF AHV +T CY E++ S +YCD S + +PC G +YYGRG + I WNYNYG G + + L P + Q+A +AF+ A+W WM V P FG T+ + G C + MN V +Y Y Sbjct: 125 GTEVEGKREIAAFFAHVTHETG-------------HFCYISEINKSNAYCDASNRQ-WPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQ----------------------GFGATIRAINGALECNGNNPAQMNARVGYYKQY 266
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.294e-18 Identity = 52/150 (34.67%), Postives = 74/150 (49.33%), Query Frame = 1 Query: 112 CYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 CY E++ S+ YCD++ + YPC PG Y+GRG I + WNYNYGA G++L +LL PE + N T+AF +W WM V +P N FG T+ + G C G+ A+N + +Y Y +G P Sbjct: 137 CYIEEINGASRDYCDENNRQ-YPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSV---------------RPVLNQ-------GFGATIRAINGME-CNGGNSGAVNARIRYYRDYCGQLGVDP 262
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.207e-18 Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 4 TKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG-TTMNILYGESVCGQGDIDAMNNI 513 T D +EI AF AHV +T +CY +E++ S YCD + K +PC PG +YYGRG + I WNYNYG G+ + D L P+ + Q+ T++F+ A+W WM V + A + N L G N G + Y + C Q +D N+ Sbjct: 133 TNDDSKREIAAFFAHVTHETG-------------HMCYINEINGASMDYCDKNNKQ-WPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATI----RAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNL 286
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.420e-18 Identity = 57/186 (30.65%), Postives = 84/186 (45.16%), Query Frame = 1 Query: 4 TKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 T D +EI AF AHV +T +CY +E++ + YCD S K +PC PG +YYGRG + I WN+NYG G+ + D L P+ + Q+ T++F+ A+W WM N+ FG T+ + G C + A+N V++Y Y G P Sbjct: 130 TNDDSKREIAAFFAHVTHETG-------------HMCYINEINGANMDYCDKSNKQ-WPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM----------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSP 279
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.095e-17 Identity = 51/184 (27.72%), Postives = 84/184 (45.65%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKA--DLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLV 546 G + KEI AF +T+ G + G G C+ ++ S YYGRG I + NY G+ + +L+N+P+ + + ++F+ AIW WMT + ++PS H+ +G W P+ DT + R P +G NI+ G+ CG G A + + Y Y ++ Sbjct: 73 GDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD-----------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTE-QDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGML 234 The following BLAST results are available for this feature:
BLAST of CF417233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417233 ID=CF417233; Name=CF417233; organism=Citrus sinensis; type=EST; length=663bpback to top |