CF417233
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39 Identity = 74/184 (40.22%), Postives = 109/184 (59.24%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC Y PC PG +Y+GRG + + WNYNYG G A+ DLLN+P+ + + T++F++A W WMTP + +PS H+ +G W P+ +D + R P +G NI+ G CG+G + + + Y Y D++G Sbjct: 120 GDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILG 300
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 1.125e-38 Identity = 73/184 (39.67%), Postives = 108/184 (58.70%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC Y PC PG +Y+GRG + + WNYNYG G A+ DLLN+P+ + + T++F++A W WMTP + +PS H+ +G W P+ +D + R +G NI+ G CG+G + + + Y Y D++G Sbjct: 98 GDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILG 278
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.277e-38 Identity = 74/179 (41.34%), Postives = 103/179 (57.54%), Query Frame = 1 Query: 22 KEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 KEI AFLA +T+ G+ A GP +WG CYN E YC S ++ PC PG +Y+GRG I I +NYNYGA G A+ +LLN+P+ + +A ++F+ A+W WMT ++ +PSAHD G W P+ D+ R P FG NI+ G C G M+N + Y Y ++G P Sbjct: 58 KEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT-AQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDP 233
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.586e-38 Identity = 72/186 (38.71%), Postives = 106/186 (56.99%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 G + KEI AF +T+ G+ A GP +WG C+ E +PS +YC S ++ PC G YYGRG + + WNYNYG G A+ +DLLN+P+ + + +AF+AAIW WMTP + +PS H VG W+P+ D + R P +G NI+ G CG+G + + + Y Y +++G P Sbjct: 117 GDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP-QSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNP 299
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.295e-38 Identity = 73/181 (40.33%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVGCWP 558 K KE+ AFLA +T+ G+ A GP AWG C+ E + + YC +PC PG +YYGRG I + NYNYG G+A+K DL+N+P+ + N T++F+ AIW WMTP + ++PS+HD G W P+ D+ + R P +G NI+ G CG G + +++ V Y Y + G P Sbjct: 131 KKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDP 307
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 9.527e-38 Identity = 74/183 (40.44%), Postives = 104/183 (56.83%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G K +EI AFL +T+ G+ A GP AWG C+ E +PS +YC S ++ PC G +YYGRG I I WNYNYG G A+ DLLN+P+ + + ++F+ A+W WMTP + +PS HD G W P+ D + R P +GT NI+ G CG+G + + + Y Y D+ G Sbjct: 114 GDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPS-TYCQASSEF--PCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFG 292
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.244e-37 Identity = 74/184 (40.22%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + +E+ AFLA +T+ G G A GP WG CYN E++P+ YC + YPC PG +Y+GRG + + WNYNYG G A+ DLLN+P+ + + T++F++A W WMTP + +PS HD +G W P+ +D + R P FG NI+ G CGQG + + + Y Y D +G Sbjct: 118 GDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQ--WDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTP-QSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLG 297
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.772e-37 Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + +EI AFL +T+ G+ A GP AWG C+ E +PS +YC + ++ PC PG +YYGRG I I WNYNYG G A+ DLLN P+ + ++ ++F++A+W WMT + +PS+HD W P+ D ++R P +GT NI+ G CG+G + + + + Y DL+G Sbjct: 122 GDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-TYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLG 300
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.772e-37 Identity = 71/183 (38.80%), Postives = 107/183 (58.47%), Query Frame = 1 Query: 1 GTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 G + +EI AFL +T+ G+ A GP AWG C+ E +PS +YC + ++ PC PG +YYGRG I I WNYNYG G A+ DLLN P+ + ++ ++F++A+W WMT + +PS+HD W P+ D ++R P +GT NI+ G CG+G + + + + Y DL+G Sbjct: 121 GDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYCSATPQF--PCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT-AQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLG 299
BLAST of CF417233 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.620e-37 Identity = 71/178 (39.89%), Postives = 105/178 (58.99%), Query Frame = 1 Query: 16 KMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFGTTMNILYGESVCGQGDIDAMNNIVSHYLYYLDLVG 549 + +E+ AFL +T+ G+ A GP AWG C+ E +PS +YC S +Y PC PG YYGRG + + WNYNYG GEAL+ +LL +P+ + + L+F+ A+W WMTP + +PS HD G W+P+ DT + R P +G N+L G CG+G + + + + Y L+G Sbjct: 53 RKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP-QAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLG 227 The following BLAST results are available for this feature:
BLAST of CF417233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417233 ID=CF417233; Name=CF417233; organism=Citrus sinensis; type=EST; length=663bpback to top |