CF417238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.190e-57 Identity = 109/197 (55.33%), Postives = 133/197 (67.51%), Query Frame = 2 Query: 80 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVIYRRME 664 CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FPGFG +G+ T RKREIAAF AQT HETTGGW AP G YAWGYC++R+ PG +Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSC +VI R + Sbjct: 49 CGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQ 244
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 215.312 bits (547), Expect = 2.299e-55 Identity = 108/206 (52.43%), Postives = 133/206 (64.56%), Query Frame = 2 Query: 65 GSAQNCGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 GS CG G C + +G G + GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF GFG +G RKRE+AAF AQT HETTGGW AP G +AWGYC+ ++ S+ PG+ YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS VI Sbjct: 44 GSTPYCGDG--CQSQCSGCGGGSTPVTPTPSGGGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVI 247
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.003e-55 Identity = 101/174 (58.05%), Postives = 124/174 (71.26%), Query Frame = 2 Query: 131 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ RKRE+AAF AQT HETTGGW AP G +AWGYC+ ++ S+ PG+ YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS VI Sbjct: 77 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAAGAFPGFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTAQAPKPSSHAVI 250
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.141e-54 Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 2 Query: 122 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ RKR++AAF AQT HETTGGW AP G +AWGYC+ ++ A+ PG +YYGRGPIQL+ N NY G A+GVDLL NPDL+ATDP +SFK+A+WFWMTAQ PKPS VI Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMTAQAPKPSSHAVI 195
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.141e-54 Identity = 101/177 (57.06%), Postives = 123/177 (69.49%), Query Frame = 2 Query: 122 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ +KRE+AAF AQT HETTGGW AP G +AWGYC+ ++ +S PG +YYGRGPIQL+ N NY G A+GVDLL NPDL+ATD + FK+AIWFWMTAQPPKPS VI Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVI 195
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.946e-54 Identity = 107/204 (52.45%), Postives = 135/204 (66.18%), Query Frame = 2 Query: 80 CGSGVVCGERDTGHG----------TDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVIYRR 658 CG G C + +G G +DG +G I+ R++FE LL +RND CPARGFYTY+AF+ AA AFP FG +GN RKRE+AAF QT HETTGGW AP G ++WGYC+ ++ +P S PG +YYGRGPIQL++N NY G A+GVDLL+NPDL+ATD +SFK+A+WFWMT Q KPS +VI R Sbjct: 63 CGDG--CQSQCSGCGPTPTPTPPSPSDG--VGSIVPRDLFERLLLHRNDGACPARGFYTYEAFLAAAAAFPAFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEWPCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTPQGNKPSSHDVITGR 262
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.261e-53 Identity = 94/178 (52.81%), Postives = 123/178 (69.10%), Query Frame = 2 Query: 125 TDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVIYRR 658 T GG++G+++ +F+ +L YRND RC GFYTYDAFI AA++F GFG +G++ +K+E+AAF AQT HETTGGW AP G YAWGYC++ + + +YYGRGPIQLT N NY G+A+ DL+NNPDLL+T+P +SFK+AIWFWMT Q KPS +VI R Sbjct: 75 TGGGDVGRLVPSSLFDQMLKYRNDGRCAGHGFYTYDAFIAAARSFNGFGTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPKDWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTPQANKPSSHDVITGR 252
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.107e-52 Identity = 95/170 (55.88%), Postives = 121/170 (71.18%), Query Frame = 2 Query: 140 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT HETTGGW AP G +AWGYC + +++P+ YYGRGPIQLT NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSC +VI Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP-------------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVI 182
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.487e-51 Identity = 97/178 (54.49%), Postives = 123/178 (69.10%), Query Frame = 2 Query: 122 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG G + GYC++RQ+ + +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSC VI Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVI 180
BLAST of CF417238 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.487e-51 Identity = 96/198 (48.48%), Postives = 124/198 (62.63%), Query Frame = 2 Query: 65 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVS-PASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCPEVI 649 G C G G G + I+SR +F+ +L +RNDA CPA+ FYTYDAF+ AA AFP F +G+ RKRE+AAF AQT HETTGGW AP G Y+WGYC+ + + SD +YYGRGPIQ+++N NY G+A+G +LL+NPDL+A+D +SFK+A WFWMT Q PKPSC V+ Sbjct: 54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVM 251 The following BLAST results are available for this feature:
BLAST of CF417238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417238 ID=CF417238; Name=CF417238; organism=Citrus sinensis; type=EST; length=672bpback to top |