CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.009e-38 Identity = 73/92 (79.35%), Postives = 83/92 (90.22%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F + PMAAPKVRF+TKIYHPN+DK GRICLDI KDKWSPALQIRTVLLSIQALLSAPNPDDPL+ ++A+ WKTNEA+A+ETA+ WTRLYA Sbjct: 57 FLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148 HSP 2 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 37/56 (66.07%), Postives = 41/56 (73.21%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEY K Sbjct: 13 QRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.207e-36 Identity = 68/92 (73.91%), Postives = 82/92 (89.13%), Query Frame = -3 Query: 272 FCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 547 F ++ PM+APKVRF+TKIYHPNID+LGRICLD+ KDKWSPALQIRT+LLSIQALLSAPNPDDPL+ ++A+ WK NEAEA+ A+EWT+ YA Sbjct: 57 FLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAREWTQKYA 148 HSP 2 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = -2 Query: 513 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNGCSK 680 QRL+ EP PGI+A P E+N RYF+V++ GP SP+EGGVFKLELFLPE+Y K Sbjct: 13 QRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPK 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.106e-31 Identity = 63/101 (62.38%), Postives = 78/101 (77.23%), Query Frame = -3 Query: 272 KEGCSNWNYFCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 574 ++G + + PM APKVRFLTKIYHPNID+LGRICLD+ K WSPALQIRTVLLSIQALL++PNP+DPL+ ++A+ W NE A A+EWT+LYA Sbjct: 48 EDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYA 148 HSP 2 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 30/50 (60.00%), Postives = 42/50 (84.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 ++L+S+P PGI+A P +DN+RYF V I GP QSPYE G+F+LEL+LP++Y Sbjct: 13 EKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDY 62
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.008e-30 Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 P PKV F TKIYHPNI+ G ICLDI KD+WSPAL + VLLSI +LL+ NPDDPL IA+ +KT++A+ TAKEWT+ YA Sbjct: 62 PFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKEWTKKYA 147 HSP 2 Score: 43.8986 bits (102), Expect = 7.008e-30 Identity = 18/45 (40.00%), Postives = 27/45 (60.00%), Query Frame = -2 Query: 531 EPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 665 +P SA P D++ ++ I+GP+ SPY GGVF L + P +Y Sbjct: 17 DPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDY 61
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.416e-29 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 266 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 529 P PKV F TK++HPNI+ G ICLDI K++WSPAL I VLLSI +LL+ PNPDDPL IA +KT+ A+ TA+ WT+ YA G Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148 HSP 2 Score: 45.0542 bits (105), Expect = 3.416e-29 Identity = 19/48 (39.58%), Postives = 28/48 (58.33%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 674 L +P SA P ++M ++ I+GPT SPY GGVF + + P +Y Sbjct: 13 LQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 5.791e-29 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 266 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 529 P PKV F TK+YHPNI+ G ICLDI K++WSPAL I VLLSI +LL+ PNPDDPL IA +KT+ ++ TA+ WT+ YA G Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148 HSP 2 Score: 43.5134 bits (101), Expect = 5.791e-29 Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 674 L +P SA P ++M ++ I+GP +SPY GGVF + + P +Y Sbjct: 13 LQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.467e-29 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKLGRICLDIXK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 P P++RFLT IYHPNID GRICLD+ K W P+L I TVL SIQ L+S PNPDDPL +I+ +K N+ ++ A++WT +A Sbjct: 62 PFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHA 151 HSP 2 Score: 50.0618 bits (118), Expect = 7.467e-29 Identity = 23/48 (47.92%), Postives = 29/48 (60.42%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 674 L +EP PGI+ +D M ILG +PYE GVFKLE+ +PE Y Sbjct: 14 LATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERY 61
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.541e-29 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 266 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 529 P PKV F TK++HPNI+ G ICLDI K++WSPAL I VLLSI +LL+ PNPDDPL IA +KT+ A+ TA+ WT+ YA G Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148 HSP 2 Score: 43.8986 bits (102), Expect = 7.541e-29 Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 674 L +P SA P ++M ++ I+GP +SPY GGVF + + P +Y Sbjct: 13 LQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 9.818e-29 Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 P PKV F T+IYHPNI+ G ICLDI +D+WSPAL I VLLSI ++L+ PNPDDPL IA +KT A+ TA+EWTR YA Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKYA 146 HSP 2 Score: 41.5874 bits (96), Expect = 9.818e-29 Identity = 17/45 (37.78%), Postives = 27/45 (60.00%), Query Frame = -2 Query: 531 EPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 665 +P SA P +++ ++ I+GP+ SPY GGVF L + P +Y Sbjct: 16 DPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.818e-29 Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = -3 Query: 266 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASG 529 P PKV F TK++HPN++ G ICLDI K++WSPAL I VLLSI +LL+ PNPDDPL IA +KT+ A+ TA+ WT+ YA G Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148 HSP 2 Score: 43.5134 bits (101), Expect = 9.818e-29 Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 674 L +P SA P ++M ++ I+GP+ SPY GGVF + + P +Y Sbjct: 13 LQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |