CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.038e-15 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = -3 Query: 263 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 538 K+ P PK FLTKI+HPN+ G IC++ K W P L I+ +LL+I+ LL PNP+ L+E K + + A+ T ++A A Sbjct: 71 KDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162 HSP 2 Score: 32.3426 bits (72), Expect = 1.038e-15 Identity = 14/50 (28.00%), Postives = 28/50 (56.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 Q + + P GI +E ++ +I GP +PY G+F+++L L +++ Sbjct: 24 QEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDF 73
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-15 Identity = 35/92 (38.04%), Postives = 51/92 (55.43%), Query Frame = -3 Query: 263 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 538 K+ P PK FLTKI+HPN+ G IC++ K W P L I+ +LL+I+ LL PNP+ L+E K + + A+ T ++A A Sbjct: 71 KDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQPA 162 HSP 2 Score: 31.187 bits (69), Expect = 1.348e-15 Identity = 15/50 (30.00%), Postives = 27/50 (54.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 Q + + P GI +E ++ I GP +PY GVF+++L L +++ Sbjct: 24 QDMETTPPEGIKVLINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDF 73
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.279e-15 Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = -3 Query: 272 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 538 K+ P PK FLTKI+HPN+ G IC++ K W P L I+ +LL+I+ LL PNP+ L+E K + + A+ T ++A Sbjct: 71 KDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159 HSP 2 Score: 31.5722 bits (70), Expect = 2.279e-15 Identity = 14/50 (28.00%), Postives = 28/50 (56.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 Q + + P GI +E ++ +I GP +PY G+F+++L L +++ Sbjct: 24 QDMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDF 73
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 2.954e-15 Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = -3 Query: 326 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDK--------WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 529 P A P++ F ++++HPNI G++C+ I WSPA +I T+LLS+ +LL+ PNPD P + + AK ++ Sbjct: 61 PYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYR 136 HSP 2 Score: 41.2022 bits (95), Expect = 2.954e-15 Identity = 17/50 (34.00%), Postives = 31/50 (62.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 + L+ P+ S +E++M ++V++ GP + YEGG+FK ++ P EY Sbjct: 11 RHLIENPSENFKISVNENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 3.893e-15 Identity = 30/89 (33.71%), Postives = 51/89 (57.30%), Query Frame = -3 Query: 311 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKD-------------KWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 538 ++ P PK++F+++I+HPNIDK G +C+ I D +W P + T+LLS+ ++L+ PN + P + + AK + N AE Sbjct: 61 RDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAE 149 HSP 2 Score: 38.1206 bits (87), Expect = 3.893e-15 Identity = 19/45 (42.22%), Postives = 26/45 (57.78%), Query Frame = -2 Query: 531 PAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEY 662 P G SA +DN Y + V+++GP + YEGG FK L P +Y Sbjct: 19 PVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDY 63
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.995e-15 Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = -3 Query: 326 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDK--------WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWK 529 P P++ F ++++HPNI G++C+ I WSPA +I TVLLS+ +LL+ PNPD P + + AK ++ Sbjct: 61 PYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYR 136 HSP 2 Score: 41.5874 bits (96), Expect = 4.995e-15 Identity = 17/50 (34.00%), Postives = 31/50 (62.00%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 + L+ P+ S +EDN+ ++V++ GP + YEGG+FK ++ P +Y Sbjct: 11 KNLIVNPSEHFKISVNEDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.452e-14 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = -3 Query: 275 NXPMAAPKVRFLTKIYHPNID-KLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVET-AKEWTRLY 535 N P+ P ++F+TKI+HPNI K G ICLD+ K WS +++V SI ALLS P D PL+ + + + + ++ A+ +TRLY Sbjct: 59 NYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNLIRNGDVKGHDSLARMYTRLY 147 HSP 2 Score: 30.8018 bits (68), Expect = 1.452e-14 Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = -2 Query: 531 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 632 E ++ + +I GP +PYE G F+L++ +P Y Sbjct: 27 ESDLYRWVAIIKGPPDTPYENGKFELDISVPTNY 60
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 64.3142 bits (155), Expect = 1.863e-14 Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKL-GRICLDIXKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 P +P V F+TKIYHPN+D++ G +CLD+ WSP + V + + LL PNP DPL+ A + + KE+ YA Sbjct: 60 PYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147 HSP 2 Score: 35.039 bits (79), Expect = 1.863e-14 Identity = 16/33 (48.48%), Postives = 21/33 (63.64%), Query Frame = -2 Query: 531 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 629 D M+ F V GP S YEGGV+K+ + LP+ Y Sbjct: 27 DGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAY 59
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.873e-14 Identity = 27/89 (30.34%), Postives = 50/89 (56.18%), Query Frame = -3 Query: 311 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIX-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 538 +N P++ P V F ++++HPN+ G++C+ I ++W+P + +++LSI ++LS PN + P + AK W+ N AE Sbjct: 63 ENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAE 151 HSP 2 Score: 36.1946 bits (82), Expect = 1.873e-14 Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = -2 Query: 531 LLSEPAPGISAS-PSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 674 L +P G SA E N+ ++V I+GP + YEGG F + PE Y Sbjct: 17 LCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENY 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2L3_PONAB (Ubiquitin-conjugating enzyme E2 L3 OS=Pongo abelii GN=UBE2L3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.882e-14 Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 275 PMAAPKVRFLTKIYHPNIDKLGRICLD-IXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLY 529 P PK+ F TKIYHPNID+ G++CL I + W PA + V+ S+ AL++ P P+ PL ++A+ + + + + A+E+T+ Y Sbjct: 62 PFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKY 147 HSP 2 Score: 26.9498 bits (58), Expect = 1.882e-14 Identity = 9/24 (37.50%), Postives = 15/24 (62.50%), Query Frame = -2 Query: 531 ILGPTQSPYEGGVFKLELFLPEEY 602 ++ P PY+ G F++E+ P EY Sbjct: 38 LIVPDNPPYDKGAFRIEINFPAEY 61 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |