CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 5.599e-13 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 269 PMAAPKVRFLTKIYHPNIDKL-GRICLDIXKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 529 P +P + F+ KI+HPNID+ G +CLD+ W+ + + S + LL+ PNP DPL+ + A + E + KE+ + YA+ Sbjct: 62 PFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 150 HSP 2 Score: 34.2686 bits (77), Expect = 5.599e-13 Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 Query: 531 FNVMILGPTQSPYEGGVFKLELFLPEEY 614 F V GP +PYEGGV+K+ + LP++Y Sbjct: 34 FVVKFYGPQGTPYEGGVWKVRVDLPDKY 61
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 5.599e-13 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 269 PMAAPKVRFLTKIYHPNIDKL-GRICLDIXKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 529 P +P + F+ KI+HPNID+ G +CLD+ W+ + + S + LL+ PNP DPL+ + A + E + KE+ + YA+ Sbjct: 62 PFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 150 HSP 2 Score: 34.2686 bits (77), Expect = 5.599e-13 Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 Query: 531 FNVMILGPTQSPYEGGVFKLELFLPEEY 614 F V GP +PYEGGV+K+ + LP++Y Sbjct: 34 FVVKFYGPQGTPYEGGVWKVRVDLPDKY 61
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 5.599e-13 Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = -3 Query: 269 PMAAPKVRFLTKIYHPNIDKL-GRICLDIXKDKWSPALQIRTVLLS-IQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 529 P +P + F+ KI+HPNID+ G +CLD+ W+ + + S + LL+ PNP DPL+ + A + E + KE+ + YA+ Sbjct: 62 PFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYAT 150 HSP 2 Score: 34.2686 bits (77), Expect = 5.599e-13 Identity = 14/28 (50.00%), Postives = 20/28 (71.43%), Query Frame = -2 Query: 531 FNVMILGPTQSPYEGGVFKLELFLPEEY 614 F V GP +PYEGGV+K+ + LP++Y Sbjct: 34 FVVKFYGPQGTPYEGGVWKVRVDLPDKY 61
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC8_SCHPO (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe GN=ubc8 PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 5.599e-13 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = -3 Query: 338 PMAAPKVRFLTKIYHPNIDKL-GRICLDIXKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIA 529 P +P + F+ +I+HPNID+L G +CLD+ WSP + + + + LL PN DPL+ A Sbjct: 60 PWKSPSIGFVNRIFHPNIDELSGSVCLDVINQTWSPMFDMINIFEVFLPQLLRYPNASDPLNGEAA 125 HSP 2 Score: 40.817 bits (94), Expect = 5.599e-13 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = -2 Query: 531 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 629 DNM+ F V GP+++PY GG++K+ + LP EY Sbjct: 27 DNMQEFYVRFHGPSETPYSGGIWKVHVELPSEY 59
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2S_NEMVE (Ubiquitin-conjugating enzyme E2 S OS=Nematostella vectensis GN=v1g237158 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = -3 Query: 272 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 538 K+ P A PK FLTKI+HPN+ K G IC++ K W P L I+ VLL+++ LL PNP+ L+E K + + AK +T ++A Sbjct: 71 KDFPAAPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKPDLGIKQVLLTVKCLLIVPNPESALNEEAGKLLLERYDDYSKRAKMFTEIHA 159
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_YARLI (NEDD8-conjugating enzyme UBC12 OS=Yarrowia lipolytica GN=UBC12 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = -3 Query: 293 WNYFCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAK 556 ++++ N P PKV+ L K+YHPNID G +CL+I ++ W P L + V++ +Q L PN DPL+++ A N E K Sbjct: 73 FSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSLNAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVK 160
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = -3 Query: 272 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 538 K+ P A PK FLTKI+HPN+ G IC+++ K W L IR VLL+I+ LL PNP+ L+E + N E A+ T ++A Sbjct: 68 KDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.234e-12 Identity = 27/99 (27.27%), Postives = 52/99 (52.53%), Query Frame = -3 Query: 281 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTR 538 ++ P+ PK++F T+I+HPN+ G +C+ I ++W P T+L+S+ ++LS+PN + P + + AK ++ N E + + R Sbjct: 63 QDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVR 161 HSP 2 Score: 34.6538 bits (78), Expect = 1.234e-12 Identity = 17/51 (33.33%), Postives = 26/51 (50.98%), Query Frame = -2 Query: 531 QRLLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEY 680 + + P G S +D + + VMI+GP + YEGG F L P++Y Sbjct: 15 KEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDY 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBCX_PICAN (Ubiquitin-conjugating enzyme E2-21 kDa OS=Pichia angusta GN=PEX4 PE=3 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.068e-12 Identity = 32/99 (32.32%), Postives = 51/99 (51.52%), Query Frame = -3 Query: 308 NXPMAAPKVRFLT----------------------KIYHPNID-KLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEA 535 N P+ PK++F+ K+ HPN++ K G ICLDI + KWSPA +++ L++I LL+ P P PL+ ++A K ++ A Sbjct: 70 NYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFKTGEICLDILQQKWSPAWTLQSALVAIVVLLANPEPLSPLNIDMANLLKCDDTTA 168 HSP 2 Score: 36.965 bits (84), Expect = 2.068e-12 Identity = 15/40 (37.50%), Postives = 25/40 (62.50%), Query Frame = -2 Query: 531 ISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 650 + P ED + ++ +I GP QSP+E ++KLE+ +P Y Sbjct: 32 VDLHPLEDGLFRWSAVIRGPDQSPFEDALWKLEIDIPTNY 71
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.080e-12 Identity = 27/88 (30.68%), Postives = 50/88 (56.82%), Query Frame = -3 Query: 311 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIX------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 538 +N P + P VRF ++++HPN+ GR+C+ I ++W+P + +++LSI ++LS+PN + P + AK W+ + E Sbjct: 65 QNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDE 152 HSP 2 Score: 31.187 bits (69), Expect = 2.080e-12 Identity = 12/36 (33.33%), Postives = 21/36 (58.33%), Query Frame = -2 Query: 525 EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 632 + N+ + V I+GP ++ Y+GG F + P+ Y N Sbjct: 34 DSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPN 69 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |