CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2G2_BOVIN (Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.082e-12 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P++ PK+RF +++HPNI GR+C+ I ++WSP + +LLS+ ++L+ PN + + + +K W+ + + + AK+ Sbjct: 65 PLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKVAKQ 157 HSP 2 Score: 33.113 bits (74), Expect = 2.082e-12 Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = -2 Query: 531 QRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 ++L P GI A P +E+N + +I+GP + +E GVF L P +Y Sbjct: 14 KQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDY 64
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 36/97 (37.11%), Postives = 58/97 (59.79%), Query Frame = -3 Query: 272 YFCLK---NXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDK-WSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 550 +F LK + P P + F T+IYHPN D G +CL I K + + P++++R+VL I LL PNPDDPL +IA+ ++ + + A+++ +A Sbjct: 57 HFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQFA 153
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2G2_PONAB (Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.705e-12 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P++ PK+RF +++HPNI GR+C+ I ++WSP + +LLS+ ++L+ PN + + + +K W+ + + + AK+ Sbjct: 65 PLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157 HSP 2 Score: 33.113 bits (74), Expect = 2.705e-12 Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = -2 Query: 531 QRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 ++L P GI A P +E+N + +I+GP + +E GVF L P +Y Sbjct: 14 KQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDY 64
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2G2_MOUSE (Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.705e-12 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P++ PK+RF +++HPNI GR+C+ I ++WSP + +LLS+ ++L+ PN + + + +K W+ + + + AK+ Sbjct: 65 PLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157 HSP 2 Score: 33.113 bits (74), Expect = 2.705e-12 Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = -2 Query: 531 QRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 ++L P GI A P +E+N + +I+GP + +E GVF L P +Y Sbjct: 14 KQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDY 64
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2G2_HUMAN (Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 2.705e-12 Identity = 26/93 (27.96%), Postives = 51/93 (54.84%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P++ PK+RF +++HPNI GR+C+ I ++WSP + +LLS+ ++L+ PN + + + +K W+ + + + AK+ Sbjct: 65 PLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQ 157 HSP 2 Score: 33.113 bits (74), Expect = 2.705e-12 Identity = 18/51 (35.29%), Postives = 28/51 (54.90%), Query Frame = -2 Query: 531 QRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 680 ++L P GI A P +E+N + +I+GP + +E GVF L P +Y Sbjct: 14 KQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDY 64
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.534e-12 Identity = 30/88 (34.09%), Postives = 45/88 (51.14%), Query Frame = -3 Query: 272 PMAAPKVRFLTKIYHPNIDKL-GRICLDIXKDKWSPALQIRTVL-LSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 529 P +P + F KIYHPN+D++ G +CLD+ WSP + + + + LL PNP DPL+ A ++ KE+ YA Sbjct: 60 PYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCERYA 147 HSP 2 Score: 30.8018 bits (68), Expect = 4.534e-12 Identity = 15/33 (45.45%), Postives = 19/33 (57.58%), Query Frame = -2 Query: 531 DNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 629 D M F V GP S Y+GGV+K+ + L E Y Sbjct: 27 DGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAY 59
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 37/98 (37.76%), Postives = 54/98 (55.10%), Query Frame = -3 Query: 245 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYASGA**HGGK 538 K+ P + PK FLTKI+HPN+ G IC+++ K W+ L IR VLL+I+ LL PNP+ L+E + N E A+ T ++ GG+ Sbjct: 68 KDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTEIHGGAGGPSGGR 165
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_SCHPO (NEDD8-conjugating enzyme ubc12 OS=Schizosaccharomyces pombe GN=ubc12 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.508e-12 Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = -3 Query: 338 NXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA 535 N P PKV+ L KIYHPNID G +CL+I + W+P L + ++L+ +Q L +PN +DPL++ A Sbjct: 79 NYPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWNPVLNLNSILVGLQFLFLSPNAEDPLNKEAA 144
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 5.925e-12 Identity = 23/96 (23.96%), Postives = 45/96 (46.88%), Query Frame = -3 Query: 281 PMAAPKVRFLTKIYHPNIDKLGRICLDIX-------------KDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTR 529 P+ P ++F + +HPN+ K G +C+ I ++WSP + +LLS+ ++L+ PN + + + K W+ + E + R Sbjct: 66 PLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLAR 161 HSP 2 Score: 38.1206 bits (87), Expect = 5.925e-12 Identity = 21/52 (40.38%), Postives = 32/52 (61.54%), Query Frame = -2 Query: 522 LSEPAP-GISASPS-EDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXNG 671 L+E P GI+A PS ED+ ++ +I GP +P+EGG++ L P +Y G Sbjct: 17 LTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLG 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: RCE1_ARATH (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana GN=RCE1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.395e-12 Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = -3 Query: 320 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 529 P APKV+ TK+YHPNID G +CL+I ++ W P L I TV+ + L + PN +DPL+ + A + N Sbjct: 89 PHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDN 158 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |