CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_XENLA (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis GN=ube2m PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = -3 Query: 320 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 529 P PKV+ T +YHPNID G +CL+I ++ W P L I +++ +Q L PNP+DPL++ A+ + N Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_MOUSE (NEDD8-conjugating enzyme Ubc12 OS=Mus musculus GN=Ube2m PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = -3 Query: 320 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 529 P PKV+ T +YHPNID G +CL+I ++ W P L I +++ +Q L PNP+DPL++ A+ + N Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_HUMAN (NEDD8-conjugating enzyme Ubc12 OS=Homo sapiens GN=UBE2M PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = -3 Query: 320 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 529 P PKV+ T +YHPNID G +CL+I ++ W P L I +++ +Q L PNP+DPL++ A+ + N Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 30/69 (43.48%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 335 LKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAK 541 L+ P+ PKV KI+HPNID G+ICL+I ++ WSPAL ++ ++L + +L PN +DPL++ A+ Sbjct: 88 LETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAE 156
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_BOVIN (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus GN=UBE2M PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = -3 Query: 320 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTN 529 P PKV+ T +YHPNID G +CL+I ++ W P L I +++ +Q L PNP+DPL++ A+ + N Sbjct: 87 PHDPPKVKCETMVYHPNIDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNN 156
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.788e-11 Identity = 28/95 (29.47%), Postives = 53/95 (55.79%), Query Frame = -3 Query: 293 PMAAPKVRFLTKIYHPNIDKLGRICL-------------DIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAEAVETAK 529 P + P RFLTK++HPNI + G +C+ ++ ++W+P +RT+LLS+ +LL+ PN P + + + + W+ ++ + E A+ Sbjct: 69 PYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAE 163 HSP 2 Score: 31.9574 bits (71), Expect = 2.788e-11 Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEY 674 L EP G + +++ Y + V I GP + YEGG FK + P +Y Sbjct: 20 LQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDY 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.788e-11 Identity = 28/95 (29.47%), Postives = 53/95 (55.79%), Query Frame = -3 Query: 293 PMAAPKVRFLTKIYHPNIDKLGRICL-------------DIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAEAVETAK 529 P + P RFLTK++HPNI + G +C+ ++ ++W+P +RT+LLS+ +LL+ PN P + + + + W+ ++ + E A+ Sbjct: 69 PYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAE 163 HSP 2 Score: 31.9574 bits (71), Expect = 2.788e-11 Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEY 674 L EP G + +++ Y + V I GP + YEGG FK + P +Y Sbjct: 20 LQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDY 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 2.788e-11 Identity = 28/95 (29.47%), Postives = 53/95 (55.79%), Query Frame = -3 Query: 293 PMAAPKVRFLTKIYHPNIDKLGRICL-------------DIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIA---KHWKTNEAEAVETAK 529 P + P RFLTK++HPNI + G +C+ ++ ++W+P +RT+LLS+ +LL+ PN P + + + + W+ ++ + E A+ Sbjct: 69 PYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAE 163 HSP 2 Score: 31.9574 bits (71), Expect = 2.788e-11 Identity = 17/49 (34.69%), Postives = 25/49 (51.02%), Query Frame = -2 Query: 531 LLSEPAPGISASPSEDNMRY-FNVMILGPTQSPYEGGVFKLELFLPEEY 674 L EP G + +++ Y + V I GP + YEGG FK + P +Y Sbjct: 20 LQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDY 68
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC12_DICDI (NEDD8-conjugating enzyme Ubc12 OS=Dictyostelium discoideum GN=ube2m PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = -3 Query: 335 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAK 529 P PKV T +YHPNID G +CL+I + W P L I TV+ + L PNPDDPL+++ A+ Sbjct: 135 PYDPPKVHCDTLVYHPNIDLEGHVCLNILRQDWMPVLNIGTVIFGLMTLFLEPNPDDPLNKDAAQ 199 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |