CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.780e-23 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = -3 Query: 311 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 529 P P VRFL+K++HPN+ G ICLDI +++WSP + ++L SIQ+LL PNP+ P + A+ ++ N+ E Sbjct: 64 PNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136 HSP 2 Score: 53.1434 bits (126), Expect = 6.780e-23 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEY N Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.780e-23 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = -3 Query: 311 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 529 P P VRFL+K++HPN+ G ICLDI +++WSP + ++L SIQ+LL PNP+ P + A+ ++ N+ E Sbjct: 64 PNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136 HSP 2 Score: 53.1434 bits (126), Expect = 6.780e-23 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEY N Sbjct: 14 KRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.823e-23 Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = -3 Query: 311 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 529 P P VRF++K++HPN+ G ICLDI +++WSP + ++L SIQ+LL PNP+ P + A+ ++ N+ E Sbjct: 64 PNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136 HSP 2 Score: 53.9138 bits (128), Expect = 8.823e-23 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEY N Sbjct: 14 KRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2A_HUMAN (Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 8.823e-23 Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = -3 Query: 311 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 529 P P VRF++K++HPN+ G ICLDI +++WSP + ++L SIQ+LL PNP+ P + A+ ++ N+ E Sbjct: 64 PNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKRE 136 HSP 2 Score: 53.9138 bits (128), Expect = 8.823e-23 Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P G+S +PSE+N+ +N +I GP +P+E G FKL + EEY N Sbjct: 14 KRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC3_ARATH (Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.148e-22 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = -3 Query: 311 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 538 ++ P P VRF+++++HPNI G ICLDI +++WSP + VL SIQ+LL PNPD P + A+ + N+ E Sbjct: 61 EDYPNKPPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEAARLFSENKRE 136 HSP 2 Score: 55.0694 bits (131), Expect = 1.148e-22 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P GIS +P ++N+ ++N +I GP +P++GG FKL L E+Y N Sbjct: 14 KRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.487e-22 Identity = 29/83 (34.94%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 290 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 538 ++ P P V+FL++++HPN+ G ICLDI +++W+P + ++L SIQ+L + PNP P + A +K ++++ ++ KE Sbjct: 61 EDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKE 143 HSP 2 Score: 55.8398 bits (133), Expect = 1.487e-22 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +R+ + PG+SASP DN+ +N MI+GP +PYE G F+L L E+Y N Sbjct: 14 KRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.937e-22 Identity = 29/80 (36.25%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P P V+FL++++HPN+ G ICLDI +++W+P + ++L SIQ+L + PNP P + A ++ ++++ V+ KE Sbjct: 64 PNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKE 143 HSP 2 Score: 56.9954 bits (136), Expect = 1.937e-22 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +R+ + PG+SASP DN+ +N MI+GP +PYE G F+L L EEY N Sbjct: 14 KRMKEDSPPGVSASPLPDNVMIWNAMIIGPADTPYEDGTFRLLLEFDEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.508e-22 Identity = 32/82 (39.02%), Postives = 50/82 (60.98%), Query Frame = -3 Query: 293 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAK 538 ++ P P V+FL+K++HPN+ G +CLDI +++WSP + +L SIQ+LL PNP+ P + A ++ N E V K Sbjct: 61 ESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEYVRRVK 142 HSP 2 Score: 52.373 bits (124), Expect = 2.508e-22 Identity = 23/52 (44.23%), Postives = 32/52 (61.54%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL ++P GIS +P DN+ +N +I GP +P+E G FKL L E Y N Sbjct: 14 KRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.283e-22 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P AP V+FL+K++HPN+ G ICLDI +++WSP I +L SIQ+LL PNP+ P + A+ ++ N+ E KE Sbjct: 64 PNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKE 143 HSP 2 Score: 50.0618 bits (118), Expect = 4.283e-22 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL S+P GIS +P E+N+ + +I GP S +EG FKL L EEY N Sbjct: 14 KRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.572e-22 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = -3 Query: 290 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 538 ++ P P VRF+++++HPNI G ICLDI +++WSP + +L SIQ+LL PNP+ P + A+ + N+ E +E Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVRE 143 HSP 2 Score: 52.7582 bits (125), Expect = 5.572e-22 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+Y N Sbjct: 14 KRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPN 65 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |