CF417240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.572e-22 Identity = 32/83 (38.55%), Postives = 51/83 (61.45%), Query Frame = -3 Query: 290 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 538 ++ P P VRF+++++HPNI G ICLDI +++WSP + +L SIQ+LL PNP+ P + A+ + N+ E +E Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 143 HSP 2 Score: 53.1434 bits (126), Expect = 5.572e-22 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+Y N Sbjct: 14 KRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.336e-22 Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = -3 Query: 311 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 529 P P V+F++K++HPN+ G ICLDI +++WSP + +L SIQ+LL PNP+ P + A+ ++ N E Sbjct: 64 PNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRRE 136 HSP 2 Score: 53.1434 bits (126), Expect = 9.336e-22 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 ++L +P G+S +P+EDN+ + +I GP ++P+E G FKL L EEY N Sbjct: 14 KKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.424e-22 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = -3 Query: 269 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYAS 529 P PK F T IYHPNI+ G IC++I KDKW+PAL + VLLSI LL PNPDDPL I + +K N + + A+E+T +A+ Sbjct: 67 PFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRAREFTARHAN 153 HSP 2 Score: 34.6538 bits (78), Expect = 9.424e-22 Identity = 14/39 (35.90%), Postives = 23/39 (58.97%), Query Frame = -2 Query: 531 SASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEY 647 S + +N+ + +I GP +PYEGG+F L + P +Y Sbjct: 28 SIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDY 66
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_ARATH (Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.597e-21 Identity = 31/83 (37.35%), Postives = 51/83 (61.45%), Query Frame = -3 Query: 290 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 538 ++ P P VRF+++++HPNI G ICLDI +++WSP + +L SIQ+LL PNP+ P + A+ + ++ E +E Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSESKREYNRRVRE 143 HSP 2 Score: 53.5286 bits (127), Expect = 1.597e-21 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+Y N Sbjct: 14 KRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC1_ARATH (Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.597e-21 Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = -3 Query: 311 KNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAE 538 ++ P P VRF+++++HPNI G ICLDI +++WSP + +L SIQ+LL PNP+ P + A+ + ++ E Sbjct: 61 EDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKRE 136 HSP 2 Score: 53.5286 bits (127), Expect = 1.597e-21 Identity = 22/52 (42.31%), Postives = 34/52 (65.38%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL +P GIS +P ++N+ +N +I GP +P++GG FKL L E+Y N Sbjct: 14 KRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 53/103 (51.46%), Postives = 61/103 (59.22%), Query Frame = -3 Query: 272 GCSNWNYFCLKNXPMAAPKVRFLTKIYHPNIDKLGRICLDIXK----DKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRLYA 568 G N + P PK+RFLT IYHPNID GRICLDI K W PAL I TVL SIQ L+S PNPDDPL +I+ +K N A AK+WT +A Sbjct: 49 GIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHA 151
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.703e-21 Identity = 29/80 (36.25%), Postives = 50/80 (62.50%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P P+V+F+++++HPN+ G +CLDI +++WSP + VL SIQ+LL+ PN P + + +K N E ++ +E Sbjct: 64 PNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRE 143 HSP 2 Score: 52.373 bits (124), Expect = 2.703e-21 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+Y N Sbjct: 14 KRMQTDPPAGVSASPIPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.703e-21 Identity = 28/80 (35.00%), Postives = 49/80 (61.25%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P P V+F+++++HPN+ G +CLDI +++WSP + +L SIQ+LL+ PN P + + +K N E ++ +E Sbjct: 64 PNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRE 143 HSP 2 Score: 53.1434 bits (126), Expect = 2.703e-21 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+Y N Sbjct: 14 KRMQTDPPAGVSASPVADNVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.497e-21 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = -3 Query: 278 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTRL 529 P P VRF++K++HPNI G +CLDI +++WSP + +L S+Q+LL+ PNP P + + A+ +K N E K+ L Sbjct: 64 PNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYERRVKKTVEL 147 HSP 2 Score: 49.2914 bits (116), Expect = 3.497e-21 Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +RL S+ GIS SP+ DN+ +N +I GP ++P+E G F+L L + Y N Sbjct: 14 KRLTSDAPIGISGSPNPDNIMVWNAVIFGPPETPFEDGSFRLTLTFTDAYPN 65
BLAST of CF417240 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.517e-21 Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = -3 Query: 290 PMAAPKVRFLTKIYHPNIDKLGRICLDIXKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKE 529 P P+V+F+++++HPN+ G +CLDI +++WSP + VL SIQ+LL+ PN P + + +K N E + +E Sbjct: 64 PNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRE 143 HSP 2 Score: 52.373 bits (124), Expect = 3.517e-21 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = -2 Query: 525 QRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYXN 680 +R+ ++P G+SASP DN+ +N +I+GP +P+E G F+L + E+Y N Sbjct: 14 KRMQTDPPAGVSASPVPDNVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPN 65 The following BLAST results are available for this feature:
BLAST of CF417240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417240 ID=CF417240; Name=CF417240; organism=Citrus sinensis; type=EST; length=681bpback to top |