CF417257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: PLD_MICLT (Pyridoxal 4-dehydrogenase OS=Microbacterium luteolum GN=pld1 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 49/155 (31.61%), Postives = 72/155 (46.45%), Query Frame = 3 Query: 36 LRKLELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGR-----------------------------YVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDI 413 L+ E R LG TGL ++ +G G +PLG ++ VS DA A + + GI +FD++P YG E +LG L+ ++STK GR + + FD+S + V RS D+S RL +D+L HDI Sbjct: 3 LKASEKRALGRTGLTVTALGLGTAPLGGLYAPVSRADADALLEAGWDSGIRYFDSAPMYGYGRCEHLLGDMLRE---KPERAVISTKVGRLMTNERAGRTLPPAPPKNPLDSGWHNGLNFREVFDYSYDGVMRSFDDSQQRLGFPEIDLLYVHDI 154
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YI7E_SCHPO (Putative aryl-alcohol dehydrogenase C977.14c OS=Schizosaccharomyces pombe GN=SPAC977.14c PE=1 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 9.374e-13 Identity = 45/177 (25.42%), Postives = 81/177 (45.76%), Query Frame = 3 Query: 60 LGNTGLRLS-----CVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC----------------GRYVDGFD---------FSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIG 500 LGN+GL++S C+ +G + E + ++ A+ GI FDT+ Y +SE+++GK ++ +PR+ ++ +KC R V D S + + ++++S+ RL Y+D+LQ H + E + AL E+GK+R+IG Sbjct: 12 LGNSGLKVSKLILGCMSYGKKEYWEDWVLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGKFIRKYEIPRSSIVILSKCFFPVRKDLIKIFGDLSSRGVHFLDSPELANQCGLSRKHIFDAVEDSVKRLGT-YIDVLQIHRYD---PHVSAEEVMRALNDVVESGKVRYIG 184 HSP 2 Score: 32.7278 bits (73), Expect = 9.374e-13 Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1 Query: 616 DLLPYLKSKGVGVISASPLAMGLLT 690 +++PY + GVG+I SPLA GLLT Sbjct: 225 EMIPYCQKTGVGLIPWSPLARGLLT 249
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 4.515e-12 Identity = 51/166 (30.72%), Postives = 80/166 (48.19%), Query Frame = 3 Query: 24 MAFPLRKLELRPLGNTGLRLSCVGFGASPLGNVFGAVS-ENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCG-RYVDG---FDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGIT 506 MA L + LG+ GL +S G G + +G E++ + + A G+ F DTS YG +E +LGKAL+ G R + ++TK G + DG V + + S RL +D +D+ H I+ + TI L+K E GKI++IG++ Sbjct: 1 MAAALVSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQ--GGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRID---KRVPIEVTIGELKKLVEEGKIKYIGLS 161 HSP 2 Score: 27.7202 bits (60), Expect = 4.515e-12 Identity = 9/26 (34.62%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 613 EDLLPYLKSKGVGVISASPLAMGLLT 690 ED++P + G+G+++ SPL G + Sbjct: 193 EDIIPTCRELGIGIVAYSPLGRGFFS 218
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 3 Query: 45 LELRPLGNTGLRLSCVGFGASPLGNVFGA-VSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDIL 398 ++ R LG +GLR+SC+G G FG+ +S+ A + A+ G+N FDT+ Y +E+ LG LK+ G R+ Y+++TK G+ S + + + SL RLQL+YVDI+ Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWV---TFGSQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIV 196
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.027e-11 Identity = 48/137 (35.04%), Postives = 76/137 (55.47%), Query Frame = 3 Query: 45 LELRPLGNTGLRLSCVGFGASPLGNVFGA-VSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIV 440 ++ R LG +GLR+SC+G G FG+ +S+ A + A+ G+N FDT+ Y +E+ LGK LK R+ Y+V+TK G+ S + + + SL RLQLDYVDI+ + ++ S +++IV Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWV---TFGSQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIV 204
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 1.663e-11 Identity = 49/164 (29.88%), Postives = 77/164 (46.95%), Query Frame = 3 Query: 45 LELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYG----GTLSEKMLGKALKAAGVPRNEYIVSTKCGRYV--------DGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIG 500 +E LG TGLR+S + G G E A + EA GI FFDT+ YG L+E ++GK G R + +++TK + D S ++ R ++ SL RLQ D++++ Q H I+ + +E A + Q +GK+ +IG Sbjct: 1 MEYTYLGRTGLRVSRLCLGTMNFGV---DTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRT---PWDEIWEAFETQVRSGKVDYIG 158 HSP 2 Score: 27.335 bits (59), Expect = 1.663e-11 Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 616 DLLPYLKSKGVGVISASPLAMGLL 687 ++LP + G+GV++ SPLA GLL Sbjct: 199 EVLPAARDLGLGVVAWSPLAGGLL 222
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.751e-11 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 45 LELRPLGNTGLRLSCVGFGASPLGNVFGA-VSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDIL 398 ++ R LG +GLR+SC+G G FG+ +S+ A + A+ G+N FDT+ Y +E+ LG LK+ G R+ Y+++TK G+ S + + + SL RLQL YVDI+ Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWV---TFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIV 196
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 39/125 (31.20%), Postives = 69/125 (55.20%), Query Frame = 3 Query: 45 LELRPLGNTGLRLSCVGFGA-SPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCH 407 ++ + LG +GLR+S + +GA GN + + R+A G+NFFD + Y +E+++G+A++ G R++ +VSTK G+ + S + + + SL RL +DYVD++ CH Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDA---GVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCH 122
BLAST of CF417257 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 60/210 (28.57%), Postives = 94/210 (44.76%), Query Frame = 3 Query: 24 MAFPLRKLELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVD------GFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLGGFTALLE 635 M+ P RK+ GN + +GFG L ++G SE A + A LG F+D+S YG +E+ +G+ K G R E ++TK G + + + + +++D SL RL +D +D+ H S + + + + AL+K EAGKIR+IG++ P AV V S I +G A E Sbjct: 1 MSIPTRKI-----GND--TVPAIGFGCMGLHAMYGPSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTG-RRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRF---SGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRE 199 The following BLAST results are available for this feature:
BLAST of CF417257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417257 ID=CF417257; Name=CF417257; organism=Citrus sinensis; type=EST; length=718bpback to top |