CF417262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: DCEA_LISMO (Glutamate decarboxylase alpha OS=Listeria monocytogenes GN=gadA PE=3 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.027e-50 Identity = 102/227 (44.93%), Postives = 146/227 (64.32%), Query Frame = 2 Query: 5 DGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFD--KPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 +G+ R NLA+F T+MEPE +++M + KN +D EYP T +L++ CVN++A L+N +++SE +G TVGSSEA ML G+A K +W++ G KP++V + QVCWEKF Y+++EL+EV +SE + ++ ++ VDE TI + ILG T G+F+D+ LNDL+ + N + IHVD ASG PF+ P LEWDFRLP V SIN SG K Sbjct: 49 EGSARQNLATFCQTYMEPEAEQIMAETMEKNAIDKSEYPQTAKLESSCVNMLADLWN--VDESEHYMGTSTVGSSEACMLGGMAMKFRWRSAALKNGLDIHAKKPSLVISSGYQVCWEKFCVYWDIELREVPMSEEHLSINTDIIMDYVDEYTIGIVGILGITYTGKFDDIMTLNDLVEDYNNTHDNEVVIHVDGASGAMFTPFVEPGLEWDFRLPNVVSINTSGHK 273
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: DCE_YEAST (Glutamate decarboxylase OS=Saccharomyces cerevisiae GN=GAD1 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.274e-47 Identity = 107/239 (44.77%), Postives = 142/239 (59.41%), Query Frame = 2 Query: 2 LDGNPRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLS-EGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAE-KNKETGW---DTPIHVDAASGGFIAPF--------LYPELEWDFRLPLVKSINVSGPK 679 LDGNP LNLASFV T+ + KL+ + KN D DEYP EL RC++++A+L++A E +G T GSSEAIML GLA K++W+++ K GK KPNI+ + QV EKF RYFEVE + V +S ++++DP + VDENTI ILG+T G E+V+ + D+L++ + K W D PIH D ASGGFI PF Y W F P V S+N SG K Sbjct: 82 LDGNPHLNLASFVNTFTTDQARKLIDENLTKNLADNDEYPQLIELTQRCISMLAQLWHA--NPDEEPIGCATTGSSEAIMLGGLAMKKRWEHRMKNAGKDASKPNIIMSSACQVALEKFTRYFEVECRLVPVSHRSHHMLDPESLWDYVDENTIGCFVILGTTYTGHLENVEKVADVLSQIEAKHPDWSNTDIPIHADGASGGFIIPFGFEKEHMKAYGMERWGFNHPRVVSMNTSGHK 318
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_UNCMA (L-tyrosine decarboxylase OS=Uncultured methanogenic archaeon RC-I GN=mfnA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 60/223 (26.91%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 14 PRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVG-VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 P + S + T P K +N N D +P T ++++RC+ +I L + P A G + T G+ I A + K ++R+A NIV + +EK ++ + ++ L + DP + ++D+NTI + A+ G+T G+ + ++ + L E D +HVDAA GGF+ PF+ ++DF +P V+SI + K Sbjct: 24 PYGRVLSSMCTNPHPIAVKAHQEFVNTNLGDPKLFPGTADIEHRCIGLIGDLLHLP-----AATGYISTGGTESNIQALRTAIQMKHTDRRRA--------NIVVPESAHYSFEKASQMLGIAIRRAPLDD-LLRADPSEMAALIDKNTIALVAVAGTTEFGQIDPIEEIGRLAQEH------DLYLHVDAAFGGFVIPFMDRPAKFDFEIPGVQSITIDPHK 226
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_METLZ (L-tyrosine decarboxylase OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=mfnA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 65/195 (33.33%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 95 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 N D +P TT++++R V+ + L + P G GT + +AI +A K K E K PNIV A+ ++K +E++ V + Y V D K EMVD+NTI V+AI G+T G +DV+ + + E D HVDAA GG + PFL +DF +P V SI++ K Sbjct: 51 NLGDPGLFPGTTKIEDRLVHSLGELMHHPGAGGYATSG-GTESNLQAIRIA---------KKLKPEIK---NPNIVVPASAHFSFDKTCDILGLEMRTVPYGKNYTV-DCDKMAEMVDKNTISVSAIAGTTEYGMIDDVERIAKIALEN------DLFFHVDAAFGGMVIPFLPNPAPFDFEVPGVSSISLDPHK 225
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_METTP (L-tyrosine decarboxylase OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=mfnA PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 61/222 (27.48%), Postives = 98/222 (44.14%), Query Frame = 2 Query: 14 PRLNLASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 P L S + T P + + N D +P T E++ R V I+ L + G GT + +A+ A R + G+ NIV + ++K A +E+++ +L E V D ++D+ T+C+ I G+T G+ + + L++L E P+HVDAA GGF+ PFL + WDFR V+SI + K Sbjct: 27 PYDRLLSTMCTRPHPVAVRAYSMFLETNLGDPGLFPGTAEIERRVVGILGSLLGCSDATGYVSTG-GTESNIQAVRAA-----------RNSSGRR--DGNIVVPRSAHFSFDKIADLLNLEVRKAELDESLRV-DVGDVERLIDDRTVCLVGIAGTTEFGQVDPIGDLSELAIENG------IPLHVDAAFGGFVLPFLEKDCMWDFRAEGVQSITIDPHK 227
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: SGPL_YEAST (Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae GN=DPL1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 58/195 (29.74%), Postives = 101/195 (51.79%), Query Frame = 2 Query: 95 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFL----YPELE-WDFRLPLVKSIN 664 N + D +P ++++ V+++ R+FNAP S+T G T G +E+++LA L+ K + R +P I+ ++K A YF ++L+ V+L Y +D K + +++NTI + + +G +D++ L +A+K K P+HVD+ G FI F+ Y L DFR+P V SI+ Sbjct: 195 NQLHPDVFPAVRKMESEVVSMVLRMFNAP---SDTGCGTTTSGGTESLLLACLSAKMYALHHR-----GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTILLVGSAPNFPHGIADDIEGLGK-IAQKYK-----LPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSIS 375
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_METHJ (L-tyrosine decarboxylase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=mfnA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 58/195 (29.74%), Postives = 95/195 (48.72%), Query Frame = 2 Query: 95 NYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 N D +P T L++R + A L++ P +A G T G +E+ + L F +K +N ++ PNI+ A+ +EK ++E++ V + E Y M A E++D+NT C+ + G+T G + + L L ++ +HVDAA GG++ PFL +DF +P V SI V K Sbjct: 51 NLGDPGLFPGTATLEDRLIRWFADLYHEP-----SAGGCTTSGGTESNIQV-LRFCKKTKNVKE--------PNIIVPASAHFSFEKACGMMDIEMRVVPVDEQYR-MKTDAAGELIDKNTCCIVGVAGTTEYGMTDPIPALGKLAEQEGVH------LHVDAAFGGYVLPFLDDAPPFDFSVPGVGSIAVDPHK 224
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_METB6 (L-tyrosine decarboxylase OS=Methanoregula boonei (strain 6A8) GN=mfnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 60/219 (27.40%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 26 LASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEG-KPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 + S + T P + + N D +P T L+ V + LF+ + A G T G +E+ + Q R A+ +P PN+V +V ++K +E++ V L +M KA E++D+NTIC+ + G+T G + + L + A++ D +HVDAA GG + PFL + +DF LP V ++ V K Sbjct: 28 ILSSMCTLPHPVAVRAHCMFMETNLGDPGLFPGTAALERLLVERLGTLFH-----HKNAGGYATSGGTESNI----------QALRLAKALRPGSSPNVVLPESVHFSFKKACDLLSLEMRSVPLGTDRRIMAD-KAAELIDKNTICLVGVAGTTEYGMVDPIADLAKIAAQQ------DIFLHVDAAFGGMVIPFLPKPVPFDFALPGVTTLAVDPHK 224
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_METAC (L-tyrosine decarboxylase OS=Methanosarcina acetivorans GN=mfnA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 57/206 (27.67%), Postives = 94/206 (45.63%), Query Frame = 2 Query: 86 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLED-------SETAVGVGTVGSSEAIMLAGLAFKRK-WQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGPK 679 I N D+ + + L+ V ++ L +AP D +A G T G +E+ + A K K++ +G P NIV + ++K A +E++ L + V D ++D NTI + I G+T G+ + + L+++ E + +H+DAA GGF+ PFL +DF+LP V SI V K Sbjct: 48 IEANLGDLGLFAGASRLEQEVVGMLGELLHAPSIDVPFGGSCESSACGYLTTGGTESNIQAVRGMKNLVTTGKKELKGAP----NIVIPESAHFSFDKVADMMGIEVRRASLDSEFRV-DMASIESLIDANTIGLIGIAGNTEFGQIDPIDKLSEIALEN------ELFLHIDAAFGGFVIPFLEKPQPFDFKLPGVTSIAVDPHK 242
BLAST of CF417262 vs. ExPASy Swiss-Prot
Match: MFNA_METTH (L-tyrosine decarboxylase OS=Methanobacterium thermoautotrophicum GN=mfnA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.194e-12 Identity = 60/202 (29.70%), Postives = 96/202 (47.52%), Query Frame = 2 Query: 86 INKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLAEKNKETGWDTPIHVDAASGGFIAPFLY---PEL-EWDFRLPLVKSINVSGPK 679 + N D + T EL++ + ++ L + P A G G +EA ++A R +N AE KP I+ + + K A + L+E +L + Y V D +++ ENT+ V + G+T G + V+ L+++ ++ D +H+DAA GGFI PFL EL E+DF+L V SI V K Sbjct: 28 LESNLGDPGLFRGTRELESGVIGMLGELLSEP-----DAAGHIITGGTEANLMA----MRAARNMAGAE-----KPEIIVPKSAHFSFRKAADILGLRLREAELDQDYRV-DVESVRKLISENTVAVVGVAGTTELGRIDPVEELSEICLDE------DIHLHIDAAFGGFIIPFLRETGAELPEFDFKLQGVSSITVDPHK 208 The following BLAST results are available for this feature:
BLAST of CF417262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417262 ID=CF417262; Name=CF417262; organism=Citrus sinensis; type=EST; length=681bpback to top |