CF417263
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417263 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15 Identity = 50/129 (38.76%), Postives = 69/129 (53.49%), Query Frame = 2 Query: 38 QSAFAGQTALRQSNEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQ 424 +++F G LR S +F+ VG R+V A ++ PDRP + P +L G PGD+G+D GL +DPE+ N + E++HSRWAMLGA G PE L+K GV W+ AG Q Sbjct: 31 KASFLGGKRLRVS-KFIAPVG---------SRSV--AVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ 144
BLAST of CF417263 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15 Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 20 ATSAIQQSAFAGQTALRQSNEF-VRKVGVADGGRITMRR-----TVKSAPQ-SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWA 502 A+S I AF+ ++ R + K G R+ + + T +SA + PDRP + P +L G PGD+G+D GL++DPE+ N++ E++H RWAMLGA G PE+L+K G+ W+ AG Q + + L + +L WA Sbjct: 6 ASSTIAAVAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQEY------FTDTTTLFIVELVLIGWA 164
BLAST of CF417263 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11 Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 2 Query: 206 QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQI 427 + P+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PE+L G+ WF+AG + Sbjct: 195 EPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-------GKGAWFEAGDSV 261
BLAST of CF417263 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.711e-11 Identity = 77/224 (34.38%), Postives = 105/224 (46.88%), Query Frame = 2 Query: 17 MATSAIQQSA---FAGQTALRQS---NEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAMLGALGCVFPEILSKNGVKFGEA--VWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLXGFC--*RIQNW---------WAVLLGEGL----DPLYPGGCF 601 MAT A+ S+ FA + A+RQS VG + G + T P G DRP + S+Q+ SYL G PGDYG+D GLS DPE F + R L EVI+ R+AMLGA+G + PE L K G+ E WF+ G I G +Y + ++ ++ L GF R Q+W + + L +G +P YPGG F Sbjct: 1 MATQALVSSSSLTFAAE-AVRQSFRARSLPSSVGCSRKGLVRAAAT----PPVKQGGVDRPLWFA--SKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGV-IPPAGTYNYWADN--------YTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPF 207 The following BLAST results are available for this feature:
BLAST of CF417263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417263 ID=CF417263; Name=CF417263; organism=Citrus sinensis; type=EST; length=615bpback to top |