CF417269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417269 vs. ExPASy Swiss-Prot
Match: CCD94_HUMAN (Coiled-coil domain-containing protein 94 OS=Homo sapiens GN=CCDC94 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.621e-13 Identity = 50/195 (25.64%), Postives = 88/195 (45.13%), Query Frame = 2 Query: 56 NFYYPPEWTPNQGSLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGN--YYSTKIWSFTMKSPCCKHQIVIQTDPKNCEYVIISGAQRKTEEFDVEDAETLELPADEERGKLSDPFYRLEHQEADLQKKKEAEPRLVQIQRISDGRXSDDYALNKALRAKLRSQRKRVTEEE 634 N YYPP++ P++ K ++R PFN+ C C I KG +FNA K+ V N Y I+ F +K C +I +TDP+N +Y + GA R + + + E + + E +L++P LE++ D + + E L +++ ++ + D+ +R+R +EE Sbjct: 8 NKYYPPDFDPSKIPKLKLPKDRQY------------VVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEVYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRLSEEERRRQQQEE 190
BLAST of CF417269 vs. ExPASy Swiss-Prot
Match: CCD94_MOUSE (Coiled-coil domain-containing protein 94 OS=Mus musculus GN=Ccdc94 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.961e-13 Identity = 50/195 (25.64%), Postives = 88/195 (45.13%), Query Frame = 2 Query: 56 NFYYPPEWTPNQGSLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGN--YYSTKIWSFTMKSPCCKHQIVIQTDPKNCEYVIISGAQRKTEEFDVEDAETLELPADEERGKLSDPFYRLEHQEADLQKKKEAEPRLVQIQRISDGRXSDDYALNKALRAKLRSQRKRVTEEE 634 N YYPP++ P++ K ++R PFN+ C C I KG +FNA K+ V N Y I+ F +K C +I +TDP+N +Y + GA R + + + E + + E +L++P LE++ D + + E L +++ ++ + D+ + Q ++ EEE Sbjct: 8 NKYYPPDFDPSKIPKLKLPKDRQY------------VVRLMAPFNMRCKTCGEYIYKGKKFNARKETVQNEAYLGLPIFRFYIKCTRCLAEITFKTDPENTDYTMEHGATRNFQAEKLLEEEEKRVQKEREDEELNNPMKVLENRTKDSKLEMEVLENLQELKDLNQRQAHVDFEAMLRQHRMSQEQWQQQQEEE 190
BLAST of CF417269 vs. ExPASy Swiss-Prot
Match: CCD94_DICDI (Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.457e-12 Identity = 46/164 (28.05%), Postives = 78/164 (47.56%), Query Frame = 2 Query: 62 YYPPEWTPNQGSLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGN--YYSTKIWSFTMKSPCCKHQIVIQTDPKNCEYVIISGAQRKTEEFDVEDAETLELPADEERGKLSDPFYRLEHQEADLQKKKEAEPRLVQIQRIS 547 YYPP++ P++ + K + + +P +I C C I +G +FNA+K+ V N Y KI+ F ++ C ++ I+TDPKN EYV SGA R E + D E E+ + D LE++ + +++ E L +I+ ++ Sbjct: 10 YYPPDFDPSKVAKIKVKRPTFTK------------VTTMLPMSIRCNTCGEYIGRGTKFNAKKETVQNEDYLGIKIYRFFLRCKKCAAELTIKTDPKNSEYVCESGATRNYEPWKETDEEKSNRMTKEQEEE-QDAMIALENRTLESKREMEMLDALEEIKSLN 160
BLAST of CF417269 vs. ExPASy Swiss-Prot
Match: CWF16_SCHPO (Cell cycle control protein cwf16 OS=Schizosaccharomyces pombe GN=cwf16 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.454e-11 Identity = 49/173 (28.32%), Postives = 78/173 (45.09%), Query Frame = 2 Query: 56 NFYYPPEWTPN---QGSLNKFHGQHALRERARKLDQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVG-NYYSTKIWSFTMKSPCCKHQIVIQTDPKNCEYVIISGAQRKTEEFDVEDAETLELPADEERGKL--SDPFYRLEHQEADLQKKKEAEPRLVQIQRISDGR 556 N Y PP++ P+ KF G + G L +R PF++ C C I KG +FNA K++ G Y+S I F ++ C +I TDPK+ +Y SGA R E + + + E ER + D +LE + D +++ + L +++ S R Sbjct: 8 NKYIPPDYDPSIRPPKKKKKFQGPNG----------GKLTVRLMTPFSMRCHTCGEYIYKGKKFNARKEKTGEKYFSIDILRFYIRCTRCAAEITFITDPKHADYAAESGASRNYEPWHEKRLQEYEENELAERNDIPEEDEMEKLEQKTLDTKRQMQISDALDELREKSARR 170
BLAST of CF417269 vs. ExPASy Swiss-Prot
Match: CWC16_YEAST (Protein CWC16 OS=Saccharomyces cerevisiae GN=YJU2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.204e-11 Identity = 59/223 (26.46%), Postives = 105/223 (47.09%), Query Frame = 2 Query: 47 RADNFYYPPEWTPNQGSLNKFHGQHALRERARKL---DQGILIIRFEMPFNIWCGGCNSMIAKGVRFNAEKKQVGNYY--STKIWSFTMKSPCCKHQIVIQTDPKNCEYVIISGA------QRKTEEFDVEDA-----ETL-------ELPADEERG---KLSDPFYRLEHQEADLQKKKEAEPRLVQIQRISDGRXSDDYALNKALRAKLRSQRKRVTEEEA 637 +A N YYPP++ P + R+ A+KL ++ IR PF++ C CN I K +FN +K+ + Y S KI+ T+ P C + I +TDP N +YV+ G Q+ ++ + + A ETL E+ +E+ G + D LE + A +Q+++E + L +++ + L + RA++ ++ K +E+A Sbjct: 5 KAINKYYPPDYNP-------LEAEKLSRKMAKKLKTMNKSHASIRLMTPFSMRCLECNEYIPKSRKFNGKKELLKEKYLDSIKIYRLTISCPRCANSIAFRTDPGNSDYVMEVGGVRNYVPQKPNDDLNAKTAVESIDETLQRLVREKEMEQNEKMGIKEQADDKMDLLEKRLAKIQQEQEDDEELENLRKKN---------LEMSQRAEMINRSKHAQQEKA 211 The following BLAST results are available for this feature:
BLAST of CF417269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417269 ID=CF417269; Name=CF417269; organism=Citrus sinensis; type=EST; length=641bpback to top |