CF417270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 1.089e-12 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F FHPNV +G++CL IL E W PA+T+ ++L+ I LL Sbjct: 64 PPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLL 110 HSP 2 Score: 43.5134 bits (101), Expect = 1.089e-12 Identity = 23/73 (31.51%), Postives = 38/73 (52.05%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E K +K+ P A P +D + W+ I G + + + GG F +T++F DYP P V+F Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED----MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.415e-12 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLL 110 HSP 2 Score: 43.5134 bits (101), Expect = 1.415e-12 Identity = 23/73 (31.51%), Postives = 38/73 (52.05%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E K +K+ P A P +D + W+ I G + + + GG F +T++F DYP P V+F Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED----MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.838e-12 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLL 110 HSP 2 Score: 43.1282 bits (100), Expect = 1.838e-12 Identity = 23/73 (31.51%), Postives = 38/73 (52.05%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E K +K+ P A P +D + W+ I G T + + GG F ++++F DYP P V+F Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED----MFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 2.387e-12 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLL 110 HSP 2 Score: 42.743 bits (99), Expect = 2.387e-12 Identity = 23/73 (31.51%), Postives = 37/73 (50.68%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E K +K+ P A P +D + W+ I G + + GG F +T++F DYP P V+F Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED----MFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 2.387e-12 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL Sbjct: 64 PPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLL 110 HSP 2 Score: 42.743 bits (99), Expect = 2.387e-12 Identity = 23/73 (31.51%), Postives = 38/73 (52.05%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E K +K+ P A P +D + W+ I G + + + GG F +T++F DYP P V+F Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAED----MFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 2.729e-12 Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILN---------EDNG--WRPAITVKQILVGIQDLLGS 570 PPK KF +HPNV+P+G VC+SIL+ ED G W P + + IL+ + +L S Sbjct: 69 PPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSS 130 HSP 2 Score: 43.8986 bits (102), Expect = 2.729e-12 Identity = 26/69 (37.68%), Postives = 37/69 (53.62%), Query Frame = 2 Query: 233 LTEERKAWRKNHPHGF-VAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 L ++ K +KN P GF V + K ++ WE +I G T +EGG+F TL F +DYP P + F Sbjct: 10 LRKQLKEIQKNPPQGFSVGLVDDK----SIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKF 74 HSP 3 Score: 21.1718 bits (43), Expect = 2.729e-12 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 615 FIQDPAEYKRRVRQQAKQ 668 F ++P E+K+RVR+ ++ Sbjct: 145 FRENPQEFKKRVRRLVRR 162
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 49.2914 bits (116), Expect = 5.230e-12 Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F +HPN+ +G++CL IL E W PA+T+ ++L+ I LL Sbjct: 64 PPKVSFKTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLL 110 HSP 2 Score: 41.9726 bits (97), Expect = 5.230e-12 Identity = 23/73 (31.51%), Postives = 37/73 (50.68%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E K +K+ P A P +D + W+ I G + + GG F ++++F DYP P VSF Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAED----MFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 5.491e-11 Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F +HPN+ +G++CL IL E W PA+TV ++L+ I LL Sbjct: 64 PPKVAFRTKVYHPNINSNGSICLDILKEQ--WSPALTVSKVLLSICSLL 110 HSP 2 Score: 38.891 bits (89), Expect = 5.491e-11 Identity = 21/73 (28.77%), Postives = 36/73 (49.32%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E + +++ P A P D + W+ I G + + GG F +T++F DYP P V+F Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDD----MFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAF 69
BLAST of CF417270 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 47.7506 bits (112), Expect = 9.273e-11 Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 1 Query: 418 PPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLL 564 PPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL Sbjct: 64 PPKVAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLL 110 HSP 2 Score: 39.2762 bits (90), Expect = 9.273e-11 Identity = 23/73 (31.51%), Postives = 36/73 (49.32%), Query Frame = 2 Query: 218 IARGRLTEERKAWRKNHPHGFVAKPETKDGSVNLMIWECIIPGKTGTDWEGGYFPLTLYFSEDYPSNPQSVSF 436 +A R+ +E +++ P A P D L W+ I G + ++GG F LT++F DYP P V+F Sbjct: 1 MALKRIQKELTDLQRDPPAQCSAGPVGDD----LFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAF 69 The following BLAST results are available for this feature:
BLAST of CF417270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417270 ID=CF417270; Name=CF417270; organism=Citrus sinensis; type=EST; length=691bpback to top |