CF417271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 38/82 (46.34%), Postives = 46/82 (56.10%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A GP AWG C+ E +PS +YC S +PC PG +YYGRG I I WNYNYG G AI Sbjct: 126 RKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPS-AYC--SATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAI 204
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 35/82 (42.68%), Postives = 44/82 (53.66%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R + A FL ++ + A GP +WG CYN E YC S + PC PG +Y+GRG I I +NYNYGA G AI Sbjct: 56 RNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAI 135
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 36/83 (43.37%), Postives = 46/83 (55.42%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ G A GP WG CYN E++P+ YC + YPC PG +Y+GRG + + WNYNYG G AI Sbjct: 123 RKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQ--WDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAI 202
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 36/80 (45.00%), Postives = 44/80 (55.00%), Query Frame = 3 Query: 378 RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R A FL ++ + A GP AWG C+ E +PS +YC S + PC G +YYGRG I I WNYNYG G AI Sbjct: 121 REIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPS-TYCQASSEF--PCASGKQYYGRGPIQISWNYNYGQCGRAI 197
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.101e-11 Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A GP +WG C+ E+ + SYC S + PC P +Y+GRG I + +NYNYG GEAI Sbjct: 137 RKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEW--PCAPDKKYFGRGPIQLSYNYNYGPAGEAI 216 HSP 2 Score: 20.7866 bits (42), Expect = 1.101e-11 Identity = 7/24 (29.17%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 607 GKPLRADLLSHPEYIEPNATLAFE 678 G+ + DLL++PE + + ++F+ Sbjct: 213 GEAIGEDLLNNPELVASDPVVSFK 236
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 1.440e-11 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 3 Query: 468 CYNHEMS-PSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 CY E+ PS++YCD++ +PC G YYGRG + I WN+NYG G++I Sbjct: 137 CYIEEIDGPSKNYCDETSTQ-WPCMAGKGYYGRGPLQISWNFNYGPAGQSI 186 HSP 2 Score: 34.2686 bits (77), Expect = 1.440e-11 Identity = 19/46 (41.30%), Postives = 25/46 (54.35%), Query Frame = 2 Query: 281 AVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKT 418 A GF+ +F+TA Y FG TG+ D +EI AF AH +T Sbjct: 90 AKGFYTRDAFLTAAGGYP--SFGRTGSVDDSKREIAAFFAHANHET 133
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.570e-11 Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A GP AWG CY E +YC S + PC G +YYGRG I I +NYNYG G+AI Sbjct: 116 RKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQW--PCAAGRKYYGRGPIQISYNYNYGQAGKAI 195
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.663e-11 Identity = 33/80 (41.25%), Postives = 39/80 (48.75%), Query Frame = 3 Query: 378 RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R A FL ++ + A G AWG C+ E S YC S + PC PG YYGRG I + NYNYG G AI Sbjct: 78 REVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQW--PCAPGKRYYGRGPIQLSHNYNYGPAGRAI 155
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 5.300e-11 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 3 Query: 465 LCYNHEMS-PSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 +CY +E++ S YCD + +PC PG +YYGRG + I WNYNYG G+ I Sbjct: 155 MCYINEINGASMDYCDKNNKQ-WPCQPGKKYYGRGPLQISWNYNYGPAGQNI 205 HSP 2 Score: 31.187 bits (69), Expect = 5.300e-11 Identity = 18/43 (41.86%), Postives = 22/43 (51.16%), Query Frame = 2 Query: 290 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKT 418 F+ QSF+ A Y GF T D +EI AF AHV +T Sbjct: 112 FYTRQSFLNAAHSYS--GFARDRTNDDSKREIAAFFAHVTHET 152
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 31/81 (38.27%), Postives = 43/81 (53.09%), Query Frame = 3 Query: 378 RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAIE 620 + A FL ++ + A GP AWG C+ E + + YC +PC PG +YYGRG I + NYNYG G+AI+ Sbjct: 133 KELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIK 210 The following BLAST results are available for this feature:
BLAST of CF417271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417271 ID=CF417271; Name=CF417271; organism=Citrus sinensis; type=EST; length=682bpback to top |