CF417271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 33/82 (40.24%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A G AWG C+ E + +YC S + PC PG YYGRG I + NYNYG G AI Sbjct: 131 RKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAI 210
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 6.090e-11 Identity = 33/82 (40.24%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A FL ++ + A G AWG C+ E + +YC S + PC PG YYGRG I + NYNYG G AI Sbjct: 128 RKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAI 207
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 6.885e-11 Identity = 25/50 (50.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 468 CYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 CY E++ S +YCD S +PC G +YYGRG + I WNYNYG G I Sbjct: 149 CYISEINKSNAYCDASNRQ-WPCAAGQKYYGRGPLQISWNYNYGPAGRDI 197 HSP 2 Score: 30.0314 bits (66), Expect = 6.885e-11 Identity = 16/43 (37.21%), Postives = 25/43 (58.14%), Query Frame = 2 Query: 290 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKT 418 F+ +F++A Y GF GT+++ +EI AF AHV +T Sbjct: 105 FYTRSAFLSAVNAYP--GFAHGGTEVEGKREIAAFFAHVTHET 145
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 35/82 (42.68%), Postives = 41/82 (50.00%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATGEAI 617 R R A F ++ + A G AWG CY E SYC S + PC PG +YYGRG I I +NYNYG G AI Sbjct: 136 RKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQW--PCAPGQKYYGRGPIQISYNYNYGPCGRAI 215
BLAST of CF417271 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 8.897e-11 Identity = 29/79 (36.71%), Postives = 40/79 (50.63%), Query Frame = 3 Query: 372 R*RRFALFLPTSAARPLVXYGVATGGPLAWGLCYNHEMSPSQSYCDDSYXYTYPCTPGAEYYGRGAIPIYWNYNYGATG 608 R R A F ++ + P WG C +E++P+ YCD +YPC A+YYGRG + + WNYNYG G Sbjct: 114 RKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCV--ADYYGRGPLQLRWNYNYGECG 190 HSP 2 Score: 21.557 bits (44), Expect = 8.897e-11 Identity = 10/25 (40.00%), Postives = 14/25 (56.00%), Query Frame = 1 Query: 607 GKPLRADLLSHPEYIEPNATLAFEA 681 G L +LL PE + + L+FEA Sbjct: 190 GNYLGQNLLDEPEKVATDPVLSFEA 214 The following BLAST results are available for this feature:
BLAST of CF417271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417271 ID=CF417271; Name=CF417271; organism=Citrus sinensis; type=EST; length=682bpback to top |