CF417291
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_CHLRE (Glutamine synthetase, chloroplastic OS=Chlamydomonas reinhardtii GN=GLN2 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.187e-44 Identity = 87/202 (43.07%), Postives = 124/202 (61.39%), Query Frame = 3 Query: 3 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPIQ-GDWNGAGAHAN 605 P W++DGSSTGQA G +S+ IL P + DP R ++LVMC+ + P G+P TN R +I V AE+ WYG EQEYT+L K A+ A+GR + ++H +AC+ AG+ ISGIN EVMPGQWE+Q+GP ++ GD++ ++R++L R+ E G+V +F+P P++ GDWNG GAH N Sbjct: 77 PDWSFDGSSTGQAEGNNSDCILRPVRVVTDPIRGAPHVLVMCEVFAPDGKPHSTNTRAKLREIIDDK-VTAEDCWYGFEQEYTMLAKTSGHIYGWPAGGFPAPQGPFYCGVGAESAFGRPLAEAHMEACMKAGLVISGINAEVMPGQWEYQIGPVGPLALGDEVMLSRWLLHRLGEDFGIVSTFNPKPVRTGDWNGTGAHTN 277
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_STRVR (Glutamine synthetase 2 OS=Streptomyces viridochromogenes GN=glnII PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.714e-43 Identity = 91/201 (45.27%), Postives = 116/201 (57.71%), Query Frame = 3 Query: 3 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPIQGDWNGAGAHAN 605 P W +DGSST QA G S+ +L P DP R G++ILV+C+ P +N R A A++ A+EP +GIEQEYT Q +PL AD+ +GRD+V++H CL AG+ ISGIN EVMPGQWEFQVGP + D LWVAR++L R E V + DP P++GDWNGAGAH N Sbjct: 37 PIWGFDGSSTNQAEGHSSDCVLKPVFTCPDPIRGGDDILVLCEVLNIDLTPHASNTRAALAEVAER--FAAQEPIFGIEQEYTFFQDG--YPLGFPKGGFPAPQGGYYCGVGADEIFGRDVVEAHLDNCLKAGLAISGINAEVMPGQWEFQVGPVSPLEVSDHLWVARWLLYRTAEDFDVAATLDPKPVKGDWNGAGAHTN 233
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_STRHY (Glutamine synthetase 2 OS=Streptomyces hygroscopicus GN=glnB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.951e-40 Identity = 87/202 (43.07%), Postives = 113/202 (55.94%), Query Frame = 3 Query: 3 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXX-ADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPIQGDWNGAGAHAN 605 P+W +DGSST QA G S+++L P DP R G+++LV+C+ P P+N R + +EP +GIEQEYT L+ D PL AD +GR+IV+ H CL AG+ +SGIN EVMPGQWEFQVG + D +WVAR++L R+ E GV S D P +GDWNGAGAH N Sbjct: 33 PRWGFDGSSTNQAEGHASDLVLEPVFSCPDPIRGGDHLLVLCEVLHTDLTPHPSNTRALLRPVAER--FAGQEPIFGIEQEYTFLKGDR--PLGFPEGGGYPAPQADYYCGVGADAIFGREIVEKHLDLCLAAGLGLSGINAEVMPGQWEFQVGALPPLEVSDHMWVARWLLHRVAEEFGVTASLDAKPAKGDWNGAGAHTN 230
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.168e-38 Identity = 68/135 (50.37%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 213 AEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPIQGDWNGAGAHANLQHQ 617 A+EPW+GIEQEYTLL KWPL A ++ GRDI + HY+ CL+AGI ISG+NGEV+P QWE+QVGP GI+ GDQ+W++RY++ R+ E+ V ++FDP PI GDWNG+G H N ++ Sbjct: 2 AQEPWFGIEQEYTLLNSVTKWPLGWPKGGYPAGQGPYYCSVGAGRSIGRDIPEVHYRCCLHAGIQISGVNGEVLPSQWEYQVGPVEGIAMGDQMWMSRYLMYRVAELFNVEVTFDPKPIPGDWNGSGGHVNFSNR 136
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.089e-37 Identity = 88/202 (43.56%), Postives = 112/202 (55.45%), Query Frame = 3 Query: 9 WNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFS-HSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPIQGDWNGAGAHAN 605 W +DGSST QAPG +S+ +L P DP R G+N LV+C+ P PTN R AA + ++D+ P +GIEQEYT + + WP K GR IV+ H +ACL AG+ I G N EVM GQWEFQ+G + GDQ+W+ R++L RI E GV +SF PI GDWNGAGAH N Sbjct: 35 WGFDGSSTNQAPGSNSDCVLRPVFETPDPIRGGDNRLVLCEVQLTDFTP-PTNTRAAALGVAERYADM---SPMFGIEQEYTFFKDGRPYGWP----EVGYPAPQGPYYCGVGGSKMPGRQIVERHTQACLDAGLAIEGTNAEVMMGQWEFQIGVLPAPAIGDQIWLGRWLLHRIAEDYGVEVSFAAKPIPGDWNGAGAHTN 228
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_BRAJA (Glutamine synthetase 2 OS=Bradyrhizobium japonicum GN=glnII PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 8.258e-30 Identity = 80/205 (39.02%), Postives = 106/205 (51.71%), Query Frame = 3 Query: 3 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPI-QGDWNGAGAHAN 605 P W +DGSST QA G S+ +L P A+F D R N +LVMC+ P G+ P +NKR A I + W+G EQEY + + + +P D A R IV+ H CL AGIN GIN EV GQWEFQ+ A D++W+ARY++ R+TE G+ + F P+ DWNG+G HAN Sbjct: 39 PLWGFDGSSTQQAEGHSSDCVLKPVAVFPDAART-NGVLVMCEVMMPDGKTPHASNKR---ATILDDAGA-----WFGFEQEYFFYKDGRPLGFPTSGYPAPQGPYYTGVGFSNVGDVA--RKIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEMWMARYLMLRLTEKYGIDIEFHCKPLGDTDWNGSGMHAN 232
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_RHILP (Glutamine synthetase 2 OS=Rhizobium leguminosarum bv. phaseoli GN=glnII PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 6.991e-29 Identity = 80/203 (39.41%), Postives = 102/203 (50.25%), Query Frame = 3 Query: 3 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGEPIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKA-WGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPI-QGDWNGAGAHAN 605 P W +DGSST QA G S+ +L P AI+ DP R N LVMC+ P G +N R A I D W+G EQEY Q PL ++ R+IV+ H CL AGIN GIN EV GQWEFQ+ A DQ+W+ARY+L+R+TE G+ + + P+ DWNG+G H N Sbjct: 39 PLWGFDGSSTMQAEGS-SDCVLKPVAIYPDPART-NGALVMCEVMMPDGHAHASNAR---ATILDDEDA-----WFGFEQEYFFYQNGR--PLGFPEQGYPAPQPYYTGVGYSNVGDVAREIVEEHLDLCLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADQIWMARYLLQRLTEKYGIDIEYHCKPLGDTDWNGSGMHCN 229
BLAST of CF417291 vs. ExPASy Swiss-Prot
Match: GLNA2_RHIME (Glutamine synthetase 2 OS=Rhizobium meliloti GN=glnII PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.937e-27 Identity = 78/205 (38.05%), Postives = 100/205 (48.78%), Query Frame = 3 Query: 3 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRRGNNILVMCDAYTPAGE-PIPTNKRHAAAKIFSHSDVVAEEPWYGIEQEYTLLQ--KDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPXPI-QGDWNGAGAHAN 605 P W +DGSST QA G S+ +L P ++ DP R N LVMC+ P E P +N R E W+G EQEY + + + +P D A R IV+ H CL AGIN GIN EV GQWEFQ+ A D++ VARY+L R+TE G+ + F P+ DWNG+G HAN Sbjct: 39 PLWGFDGSSTLQAEGRTSDCVLKPVTVYPDPVRT-NGALVMCEVMMPDAETPHASNTRATVLD--------DEGAWFGFEQEYFFYKNGRPLGFPEQGYPAPQGPYYTGVGYKNVGDVA--RQIVEEHLDICLAAGINHEGINAEVAKGQWEFQIFGKGSKKAADEVCVARYLLVRLTEKYGIDVEFHCKPLGDTDWNGSGMHAN 232 The following BLAST results are available for this feature:
BLAST of CF417291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417291 ID=CF417291; Name=CF417291; organism=Citrus sinensis; type=EST; length=619bpback to top |