CF417326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_BUCAI (50S ribosomal protein L13 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rplM PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.896e-30 Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 328 WYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 WY VDAT+KILGRLAS ++ H+RGK+ YTP +D G Y+IV+NA K+ V+G KR KIY H+G GG+K+ F+++ PER+IE AV+GMLPKG LGR +F LK Sbjct: 15 WYYVDATNKILGRLASALSFHLRGKHKTEYTPHLDTGDYIIVINASKILVTGNKRINKIYYHHTGYVGGIKQSRFEEMISSHPERVIEIAVKGMLPKGALGRSMFKKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_BUCA5 (50S ribosomal protein L13 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=rplM PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.896e-30 Identity = 61/109 (55.96%), Postives = 80/109 (73.39%), Query Frame = 1 Query: 328 WYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 WY VDAT+KILGRLAS ++ H+RGK+ YTP +D G Y+IV+NA K+ V+G KR KIY H+G GG+K+ F+++ PER+IE AV+GMLPKG LGR +F LK Sbjct: 15 WYYVDATNKILGRLASALSFHLRGKHKTEYTPHLDTGDYIIVINASKILVTGNKRINKIYYHHTGYVGGIKQSRFEEMISSHPERVIEIAVKGMLPKGALGRSMFKKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_ACTSZ (50S ribosomal protein L13 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=rplM PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.896e-30 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y+IV+NA+KVAV+G+K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKVYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_VIBPA (50S ribosomal protein L13 OS=Vibrio parahaemolyticus GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDA K LGRLAS IA +RGK+ A YTP VD G Y+IV+NAEKVAV+G K K+Y RHS PGG+K TF++L R PE ++E AV+GMLP+G LGR ++ LK Sbjct: 13 RDWYVVDAEGKTLGRLASEIASRLRGKHKAEYTPHVDAGDYIIVINAEKVAVTGNKAKDKVYYRHSEFPGGLKSITFEKLIDRKPEMVLELAVKGMLPRGPLGRAMYRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_HAES2 (50S ribosomal protein L13 OS=Haemophilus somnus (strain 2336) GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y++V+NAEKVAV+G K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLAAELARRLRGKHKAEYTPHVDTGDYIVVINAEKVAVTGNKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_HAES1 (50S ribosomal protein L13 OS=Haemophilus somnus (strain 129Pt) GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y++V+NAEKVAV+G K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIVVINAEKVAVTGNKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_HAEIN (50S ribosomal protein L13 OS=Haemophilus influenzae GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y+IV+NA+KVAV+G+K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_HAEIG (50S ribosomal protein L13 OS=Haemophilus influenzae (strain PittGG) GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y+IV+NA+KVAV+G+K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_HAEIE (50S ribosomal protein L13 OS=Haemophilus influenzae (strain PittEE) GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y+IV+NA+KVAV+G+K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123
BLAST of CF417326 vs. ExPASy Swiss-Prot
Match: RL13_HAEI8 (50S ribosomal protein L13 OS=Haemophilus influenzae (strain 86-028NP) GN=rplM PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.477e-30 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 322 KTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAYVIVVNAEKVAVSGKKRTQKIYRRHSGRPGGMKEETFDQLQHRIPERIIEHAVRGMLPKGRLGRELFTHLK 654 + WYVVDAT K LGRLA+ +A +RGK+ A YTP VD G Y+IV+NA+KVAV+G+K T K+Y H+G GG+K+ TF ++ R PE +IE AV+GMLPKG LGR +F LK Sbjct: 13 RDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVINADKVAVTGRKETDKLYYWHTGYVGGIKQATFKEMIARRPEAVIEIAVKGMLPKGPLGRAMFRKLK 123 The following BLAST results are available for this feature:
BLAST of CF417326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417326 ID=CF417326; Name=CF417326; organism=Citrus sinensis; type=EST; length=654bpback to top |