CF417340
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL2_RAT (Dihydropyrimidinase-related protein 2 OS=Rattus norvegicus GN=Dpysl2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20 Identity = 45/95 (47.37%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A++FN+YPRKG I VGSDAD++I++P+S I+A++H+S L+ N++EG +G V I+ G++V E+ L+V GSG+YI +PF Sbjct: 380 FVAVTSTNAAKVFNLYPRKGRISVGSDADLVIWDPDSVKTISAKTHNSALEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL2_MOUSE (Dihydropyrimidinase-related protein 2 OS=Mus musculus GN=Dpysl2 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.382e-20 Identity = 45/95 (47.37%), Postives = 70/95 (73.68%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A++FN+YPRKG I VGSDAD++I++P+S I+A++H+S L+ N++EG +G V I+ G++V E+ L+V GSG+YI +PF Sbjct: 380 FVAVTSTNAAKVFNLYPRKGRISVGSDADLVIWDPDSVKTISAKTHNSALEYNIFEGMECRGSPLVVISQGKIVLEDGTLHVTEGSGRYIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL2_CHICK (Dihydropyrimidinase-related protein 2 OS=Gallus gallus GN=DPYSL2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.079e-20 Identity = 45/95 (47.37%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A+IFN+YPRKG I VGSDAD++I++P+S I+A++H+ L+ N++EG +G V I+ G++V E+ L+V GSG+YI +PF Sbjct: 380 FVAVTSTNAAKIFNLYPRKGRIAVGSDADLVIWDPDSVKTISAKTHNISLEYNIFEGMECRGSPLVVISQGKIVLEDGNLHVTEGSGRYIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYS_HUMAN (Dihydropyrimidinase OS=Homo sapiens GN=DPYS PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.860e-20 Identity = 47/107 (43.93%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF-NYLFHGLDKAD 331 +V +TST A+IFN+YPRKG I VGSDADI+I++P + I+A++HH ++ N++EG G VTI+ G+VV+E +V G GK+I +PF Y++ + + D Sbjct: 374 FVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGKVVYEAGVFSVTAGDGKFIPRKPFAEYIYKRIKQRD 480
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL4_RAT (Dihydropyrimidinase-related protein 4 (Fragment) OS=Rattus norvegicus GN=Dpysl4 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 11 DYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 ++V +TST A+IFN YPRKG + VGSDAD++I+NP ++ I+A+SH+ ++ N++EG +G V I+ GRVV E+ L V PG+G++I + F Sbjct: 371 EFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPRATKVISAKSHNLNVEYNIFEGVECRGMPTVVISQGRVVLEDGNLLVTPGAGRFIPRKTF 466
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYS_RAT (Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19 Identity = 50/120 (41.67%), Postives = 78/120 (65.00%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF-NYLFHGLDKADAKYLSSLQAPVKR 370 +V +TST A+IFN+YP+KG I VGSDADI+I++P ++ I+A++HH ++ N++EG G VTI+ GRVV+E +V G GK+I +PF +++ + + D + PVKR Sbjct: 374 FVAVTSTNAAKIFNLYPKKGRIAVGSDADIVIWDPEATRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRGRVVYEAGVFDVTAGHGKFIPRQPFAEFIYKRVKQRDQ---TCTPIPVKR 490
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL1_MOUSE (Dihydropyrimidinase-related protein 1 OS=Mus musculus GN=Crmp1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.996e-19 Identity = 43/95 (45.26%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A+IFN+YPRKG I VGSDAD++I++P+ ITA+SH S ++ N++EG G V I+ G++V+E+ ++V G G++I +PF Sbjct: 380 FVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTITAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSKGMGRFIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL1_RAT (Dihydropyrimidinase-related protein 1 OS=Rattus norvegicus GN=Crmp1 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.404e-19 Identity = 42/95 (44.21%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A+IFN+YPRKG I VGSDAD++I++P+ +TA+SH S ++ N++EG G V I+ G++V+E+ ++V G G++I +PF Sbjct: 380 FVAVTSTNAAKIFNLYPRKGRIAVGSDADVVIWDPDKMKTLTAKSHKSTVEYNIFEGMECHGSPLVVISQGKIVFEDGNISVSKGMGRFIPRKPF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPYL4_MOUSE (Dihydropyrimidinase-related protein 4 OS=Mus musculus GN=Dpysl4 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19 Identity = 43/96 (44.79%), Postives = 67/96 (69.79%), Query Frame = 2 Query: 11 DYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 ++V +TST A+IFN YPRKG + VGSDAD++I+NP ++ +A+SH+ ++ N++EG +G V I+ GRVV E+ L V PG+G++I + F Sbjct: 379 EFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPRATKVFSAKSHNLNVEYNIFEGVECRGVPTVVISQGRVVLEDGNLLVTPGAGRFIPRKTF 474
BLAST of CF417340 vs. ExPASy Swiss-Prot
Match: DPY3A_XENLA (Dihydropyrimidinase-related protein 3-A OS=Xenopus laevis GN=dpysl3-A PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.446e-19 Identity = 41/95 (43.16%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 14 YVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRLDTNVYEGRRVKGKVEVTIAGGRVVWENDELNVVPGSGKYIEMRPF 298 +V +TST A+IFN+YPRKG I VGSD+D++I++P++ ++A+SHHS + N++EG ++G V I G+++ E+ L+V G+G++I PF Sbjct: 380 FVSVTSTNAAKIFNLYPRKGRIAVGSDSDLVIWDPDAVKIVSAKSHHSAAEYNIFEGMELRGAPLVVICQGKIMMEDGTLHVTQGTGRFIHCSPF 474 The following BLAST results are available for this feature:
BLAST of CF417340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417340 ID=CF417340; Name=CF417340; organism=Citrus sinensis; type=EST; length=664bpback to top |