CF417342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_BACHD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus halodurans GN=gpmI PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.840e-25 Identity = 68/180 (37.78%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDR 540 LH+ GL+SDGG+HS ++ L LL+ A +R+ +H DGRDV S+ ++ +E + EL GV ++A+ GR Y MDR + WD V++ + A V GE P + SA++ +K E + +D+++ P VI +E+G V I D DA++ FNFR DR + +++ +DF FDR Sbjct: 111 LHIYGLVSDGGIHSHINHLYALLELAKREQVERVYIHGFLDGRDVGPTSAESYLVDLEAKMKEL---GV-GELATLHGR-YYAMDR-DKRWDRVEKSYRAMVYGEGP-AYSSALDVIKDSYEN-SIHDEFVIPSVITNEDGSPVATIEDDDAIIFFNFRPDRAIQMSQVFTNKDFRGFDR 282
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_CELJU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cellvibrio japonicus (strain Ueda107) GN=gpmI PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.322e-25 Identity = 78/204 (38.24%), Postives = 115/204 (56.37%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDR-VRFPKI-RYAGMLQYDGELKLPV 606 +H++GLLS+GGVHS D L ++ A ERGAK++ LH DGRD S+ ++ + A+L G G ++AS GR Y +DR +N WD VK +D V GEA +AV+ +K E+ ND+++ VI E+ + V I DGD+V+ NFR DR + +AL E+F FDR P I + +Y ++K P+ Sbjct: 112 VHILGLLSEGGVHSHQDHLYAMINMAVERGAKQVYLHAFLDGRDTPPRSAEASLQKAQDVFAKL-GTG---RVASIVGR-YFALDR-DNRWDRVKTAYDVMVTGEAEFDALTAVDGLKAAYER-GENDEFVKATVICGED-EEVATINDGDSVIFMNFRPDRAREITRALIDENFTGFDRGETHPAIAHFVQTTEYASDIKAPI 307
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_BACP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus pumilus (strain SAFR-032) GN=gpmI PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.322e-25 Identity = 68/180 (37.78%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDR 540 LHL GLLSDGGVHS + L LLK A + G ++ +H DGRDV ++ +++ +E+ + E+ GV ++A+ GR Y +MDR + WD V++ + A GE P +++ + V E D+++ P VI ENG+ V + DGD+V+ +NFR DR + ++ EDF FDR Sbjct: 111 LHLFGLLSDGGVHSHIQHLFALLKLAKKEGLTKVYIHGFLDGRDVGQKTAKVYLKQLEEQIKEI---GV-GEVATLSGR-YYSMDR-DKRWDRVEKAYRAMAYGEGP-SYQNIYDVVDDSYEN-GIYDEFVIPSVITRENGEPVAKVNDGDSVIFYNFRPDRAIQISNTFTNEDFRSFDR 282
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_COLP3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gpmI PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 8.256e-25 Identity = 72/207 (34.78%), Postives = 117/207 (56.52%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL-----RGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKI-RYAGMLQYDGELKLP 603 +H+ GLLS GGVHS + + +++ A +RGA+++ LH DGRD S+ +E ++ ++L G+G QIAS GR Y MDR + WD V+ ++ V GE H++ SA++A+ E+ N ND+++ I +GKA+ + DGDA++ NFRADR ++ +F+ F+R R P I + + QY ++ P Sbjct: 112 VHIFGLLSPGGVHSHEEHIFAMMELAKKRGAQKVYLHAFLDGRDTPPRSAQASLEKAQQKFSKLFTETDTGEG---QIASVIGR-YYAMDR-DQRWDRVEAAYNLMVNGEGLHQYNSALDALAAAYER-NENDEFVGASAITSPSGKAI-KVNDGDALIFMNFRADRARQFSRCFTDTNFNGFERKRIPAISNFVMLTQYAADIDAP 311
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_SHEAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gpmI PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.078e-24 Identity = 68/199 (34.17%), Postives = 113/199 (56.78%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELK 597 +H++GLLS GGVHS + ++ +++ A++RGA ++ LH DGRD S+ G + + A L +IAS GR Y MDR +N WD V + +D G+ H +AV+A++ + + ND+++ P IVD NG +V + D DA++ NFRADR ++++ F F+R PK + + +Y G+++ Sbjct: 112 VHIMGLLSPGGVHSHEEHIEAMIRMAAKRGATKVYLHAFLDGRDTPPRSAKGSLAHFTELFASLNA----GRIASIVGR-YFAMDR-DNRWDRVVQAYDLITQGKGKHSATNAVDALEAAYAR-DENDEFVAPTAIVDANGDSVS-LNDNDALIFMNFRADRARQISRSFTDPAFAGFERAVTPKTHFVMLTEYAGDIQ 302
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_PSEP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gpmI PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.078e-24 Identity = 78/202 (38.61%), Postives = 112/202 (55.45%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKI-RYAGMLQYDGELKLP 603 +H++GLLSDGGVHS D L + K A++RGA++I LH DGRD S+ +E ++ A+L GKG +IAS GR Y MDR +N WD V ++ V A + +A+ ++ + +++ FV G AV + DGDAV+ NFRADR L++A DF F R R PK+ Y G+ QY ++ P Sbjct: 113 VHILGLLSDGGVHSHQDHLVAMAKLAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR-DNRWDRVSAAYNLIVDSAAEYTADTALAGLEAAYARDESDE-----FVKATRIGDAV-KVEDGDAVIFMNFRADRARELSRAFVEPDFTEFARARLPKMAAYIGLTQYSAKIPAP 302
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_HAHCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Hahella chejuensis (strain KCTC 2396) GN=gpmI PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.078e-24 Identity = 76/186 (40.86%), Postives = 104/186 (55.91%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKI 558 +HL+GLLS GGVHS D + K A ERGA ++ +H DGRD S+ +E +K L EL G G ++AS GR Y MDR +N WD V+ +D LGEAP+ +SAV+A+ E+ ++ + + AV I DGDAV+ NFRADR L + +DFD F R + PK+ Sbjct: 113 VHLLGLLSPGGVHSHEDHILAACKVARERGADKVFVHAFLDGRDTPPRSAQPSLERTDKLLKEL-GCG---RVASIIGR-YYAMDR-DNRWDRVQAAYDLLTLGEAPYHAESAVQALTAAYERGEDDEFVKATLIKGSSDNDAV--ISDGDAVIFMNFRADRARELTRCFVEQDFDGFQRNKLPKL 290
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_SHEON (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella oneidensis GN=gpmI PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.408e-24 Identity = 69/202 (34.16%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLPV 606 +H++GLLS GGVHS + ++ + + A RGA ++ LH DGRD S+ + + DL G G +IAS GR Y MDR +N WD V + +D G++ ++ +AV A++ + + ND+++ I D NG+ V + DGDA++ NFRADR + ++ +FD F R PK+ + + +Y ++K P+ Sbjct: 113 VHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKSSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR-DNRWDRVSQAYDLITQGKSKFQYDNAVTALEAAYSR-DENDEFVSSSAITDANGQ-VATLQDGDALIFMNFRADRARQITRSFINPEFDGFARAVTPKVNFVTLTEYAADIKAPI 306
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain KT2440) GN=gpmI PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.839e-24 Identity = 77/202 (38.12%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKI-RYAGMLQYDGELKLP 603 +H++GLLSDGGVHS D L + + A++RGA++I LH DGRD S+ +E ++ A+L GKG +IAS GR Y MDR +N WD V ++ V A + +A+ ++ + +++ FV G+AV + DGDAV+ NFRADR L++A DF F R R PK+ Y G+ QY ++ P Sbjct: 113 VHILGLLSDGGVHSHQDHLVAMAELAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR-DNRWDRVSAAYNLIVDSAAEYTADTALAGLEAAYARDESDE-----FVKATRIGEAV-KVEDGDAVIFMNFRADRARELSRAFVEPDFTEFARARLPKMAAYIGLTQYSAKIPAP 302
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=gpmI PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.839e-24 Identity = 78/197 (39.59%), Postives = 116/197 (58.88%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVR--FPKIRYAGMLQYD 585 LHL GLLSDGGVHS L LL+ A + K + +H DGRDV S++G+VE +E + E+ GV +IA+ GR Y MDR +N W+ VK +DA VLG ++ +SA EAV + ++ D+++ P VI+ +NG V + + D+++ FNFR DR + +A +F F+R + FP + + M QYD Sbjct: 111 LHLFGLLSDGGVHSHNTHLYGLLEFAKRQNLKDVYVHCFFDGRDVPPDSAMGYVEELENKIREI---GV-GEIATVMGR-YYAMDR-DNRWERVKLAYDAMVLGRG-NQAQSAKEAVAESYKRQEF-DEFVKPTVIM-KNGSPVATVGENDSIIFFNFRPDRAREITRAFTEVNFSGFEREKGYFP-VFFVCMTQYD 297 The following BLAST results are available for this feature:
BLAST of CF417342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417342 ID=CF417342; Name=CF417342; organism=Citrus sinensis; type=EST; length=625bpback to top |