CF417342
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI2_METBF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=gpmI2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.098e-24 Identity = 71/211 (33.65%), Postives = 110/211 (52.13%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNAND---------QYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLPV 606 LHL+GL S GG+HS + L LLK E+ K++ +H DGRD +++G ++ ++ E +A+IA+ GR Y MDR + WD K +DA G AP+ +A AV + ++ Q + VI ++ K V + D D+V+ FNFRADR + A +DFD F R + P++ + M QYD L++P+ Sbjct: 113 LHLMGLASCGGIHSYMPHLHALLKLVQEKDLKKVYIHAFLDGRDEPPKAALGDIKKLDAFCKEHG----NAKIATVSGRYYA-MDR-DKRWDRTKLAYDALTRGVAPYTAPNAETAVSNAYSRGETDEFVKPTIITEQVITEQVITEQAEKPVATVQDNDSVIFFNFRADRARQITWAFVKDDFDGFMREKRPEVYFVCMTQYDETLEVPI 317
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_CLOD6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium difficile (strain 630) GN=gpmI PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 6.989e-24 Identity = 66/180 (36.67%), Postives = 109/180 (60.56%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDR 540 LH++GLLSDGGVHS +D L+ ++K A ++G +++ +H TDGRD S++ + + ++ + E+ GV + A+ GR Y MDR + W+ V+ ++A V G K S EA++ + ND+++ P VI+ ++ K VG I + D+++ FNFR DR + +AL E+FD F R Sbjct: 109 LHVMGLLSDGGVHSHIDHLKAIIKMAKDKGVQKVYVHAFTDGRDTDPQSALEYAKEVQASMDEI---GV-GEFATVSGR-YYAMDR-DKRWERVELAYNAMVRG-IGEKANSIEEAIQNSYDD-GKNDEFIMPTVIMKDD-KPVGSIKENDSIIFFNFRPDRARQITRALVCEEFDGFKR 279
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_SALTY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhimurium GN=gpmI PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 71/202 (35.15%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLPV 606 +H++GLLS GGVHS D + +++ A+ERGA++I LH DGRD S+ ++ E A L GKG ++AS GR Y MDR +N WD V++ +D L + + +AV ++ + + ND+++ VI E G+A + DGD ++ NFRADR + +A DFD F R + + + + +Y ++K V Sbjct: 113 VHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQGEFQADTAVAGLQAAYAR-DENDEFVKATVIRAE-GQADAAMEDGDTLIFMNFRADRAREITRAFVNADFDGFARKKVVNLNFVMLTEYAADIKTAV 306
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_SALTI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhi GN=gpmI PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 71/202 (35.15%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLPV 606 +H++GLLS GGVHS D + +++ A+ERGA++I LH DGRD S+ ++ E A L GKG ++AS GR Y MDR +N WD V++ +D L + + +AV ++ + + ND+++ VI E G+A + DGD ++ NFRADR + +A DFD F R + + + + +Y ++K V Sbjct: 113 VHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQGEFQADTAVAGLQAAYAR-DENDEFVKATVIRAE-GQADAAMEDGDTLIFMNFRADRAREITRAFVNADFDGFARKKVVNLNFVMLTEYAADIKTAV 306
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_SALPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella paratyphi A GN=gpmI PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.192e-23 Identity = 71/202 (35.15%), Postives = 113/202 (55.94%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLPV 606 +H++GLLS GGVHS D + +++ A+ERGA++I LH DGRD S+ ++ E A L GKG ++AS GR Y MDR +N WD V++ +D L + + +AV ++ + + ND+++ VI E G+A + DGD ++ NFRADR + +A DFD F R + + + + +Y ++K V Sbjct: 113 VHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQGEFQADTAVAGLQAAYAR-DENDEFVKATVIRAE-GQADAAMEDGDTLIFMNFRADRAREITRAFVNADFDGFARKKVVNLNFVMLTEYAADIKTAV 306
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_PSEMY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas mendocina (strain ymp) GN=gpmI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.557e-23 Identity = 76/201 (37.81%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLP 603 +H++GLLSDGGVHS D + + + A+ RGA++I LH DGRD S+ +E ++ A L GKG +IAS GR Y MDR +N WD V++ + V G SAVE ++ E+ +++ FV G V + DGDAVV NFRADR L +A F F+R R P++ + + QY + P Sbjct: 113 VHILGLLSDGGVHSHQDHIVAMAELAARRGAEKIYLHAFLDGRDTPPKSAQPSIELLDAAFARL-GKG---RIASLTGR-YFAMDR-DNRWDRVEQAYHLIVDGAGQFNAASAVEGLQAAYERGESDE-----FVKATTIGAPV-QVEDGDAVVFMNFRADRARELTRAFVEPGFQEFERKRAPQVGFVMLTQYAASIPAP 301
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_BACSK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus clausii (strain KSM-K16) GN=gpmI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.557e-23 Identity = 67/180 (37.22%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDR 540 LH+ GLLSDGG+HS +D + LL A ++ +R+ +H DGRDV S+ +++ ++ E+ G G ++A+ GR Y MDR + WD V++ + A V GE P +K+ +E + + N D+++ P VI +E+G V + D DAV+ NFR DR + L++ EDF FDR Sbjct: 111 LHIYGLLSDGGIHSHIDHIYALLDMAKQQNVERVYVHGFLDGRDVGPTSAEVYLKGLQDKFDEV-GLG---KLATVHGR-YYAMDR-DKRWDRVEKSYRAMVYGEGP-SYKNGLELLDDSYKN-NIVDEFVIPSVITEEDGTPVATVKDDDAVIFCNFRPDRAIQLSQVFTNEDFRGFDR 282
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_THERP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=gpmI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 73/186 (39.25%), Postives = 101/186 (54.30%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKAL-EYEDFDXFDRVRFPK 555 LHL+GL+ DGGVHS L LL+ A+ G R+ +H TDGRD S + + + L LR +A+ GR Y MDR + W+ K +DA V G +S +EA+++ Q D+++ P VIVD GK + I DGDAV+ FNFRADR L +AL + F F R R+P+ Sbjct: 112 LHLMGLIGDGGVHSHQRHLLALLELAARAGISRVAVHAFTDGRDTAPTSGIEHLRELLAALDRLR----TGFVATVSGR-YYAMDR-DKRWERTKLAYDAIVCG-LGQTARSPLEAIERSYAQ-GITDEFIVPTVIVDAEGKPLATINDGDAVIFFNFRADRARQLTQALTDAGGFTAFPRCRWPR 289
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_SHEHH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gpmI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 69/202 (34.16%), Postives = 111/202 (54.95%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLPV 606 +H++GLLS GGVHS D ++ + + + +RGAK++ LH DGRD S+ + E +L + G G Q+AS GR Y MDR +N WD V + ++ G+ H+ SAVE ++ + + ND+++ I D G + + D DA++ NFRADR + ++ DFD F R PKI + + +Y ++K + Sbjct: 113 VHIMGLLSPGGVHSHQDHIEAMCRLSVKRGAKKVYLHAFLDGRDTPPRSAKPGLAHFE-ELFKTLGTG---QVASLIGR-YYAMDR-DNRWDRVSQAYELITEGKGLHQATSAVEGIEAAYTR-DENDEFVGSTAIPDAQGNII-KLEDNDALIFMNFRADRARQITRSFINADFDGFKRAVTPKINFVMLTEYAADIKAAI 306
BLAST of CF417342 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf0-1) GN=gpmI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 75/201 (37.31%), Postives = 109/201 (54.23%), Query Frame = 1 Query: 1 LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKRGWDAQVLGEAPHKFKSAVEAVKKLREQPNANDQYLPPFVIVDENGKAVGPIVDGDAVVTFNFRADRMVMLAKALEYEDFDXFDRVRFPKIRYAGMLQYDGELKLP 603 +H +GLLSDGGVHS D L + + A +RGA++I LH DGRD S+ +E ++ L GKG +IAS GR Y MDR +N WD V + ++ V G+ +A E ++ + +++ FV G+ V + DGDAVV NFRADR L++ + F F+R R PK++Y G+ QY + P Sbjct: 113 VHFMGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAASSIELLDATFQAL-GKG---RIASLIGR-YYAMDR-DNRWDRVAQAYNLIVDGKGEINAATAQEGLEAAYARGESDE-----FVKATSIGEPV-KVEDGDAVVFMNFRADRARELSRVFVEDGFKEFERARQPKVQYVGLTQYAESIPAP 301 The following BLAST results are available for this feature:
BLAST of CF417342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 266
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417342 ID=CF417342; Name=CF417342; organism=Citrus sinensis; type=EST; length=625bpback to top |