CF417347
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAR (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain MRSA252) GN=gnd PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.513e-41 Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
+K + +++E++ F +WN GEL S+LIEIT LV+K+LD G KGTGKWT A +L + I S+ ARF+S +KEERV A+K G +++ DK+ ++ +R+ALY SKICSYAQG +R S + W+LKLG+LA
Sbjct: 203 MKELLGMSHEDIAQTFKDWNAGELESYLIEITGDIFMKLDENKEA-LVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKELN----GPKASFDGDKKDFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGDLA 356 HSP 2 Score: 66.2402 bits (160), Expect = 9.513e-41 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +IK AYD N L NLL+DP F + + Q A R VV + +G+ TPG SSS+
Sbjct: 363 CIIRAQFLQKIKDAYDNNPGLQNLLLDPYFKNIVTEYQDALRDVVATGVQNGVPTPGFSSSI 424
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAN (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain N315) GN=gnd PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.513e-41 Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
+K + +++E++ F +WN GEL S+LIEIT LV+K+LD G KGTGKWT A +L + I S+ ARF+S +KEERV A+K G +++ DK+ ++ +R+ALY SKICSYAQG +R S + W+LKLG+LA
Sbjct: 203 MKELLGMSHEDIAQTFKDWNAGELESYLIEITGDIFMKLDENKEA-LVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKELN----GPKASFDGDKKDFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGDLA 356 HSP 2 Score: 66.2402 bits (160), Expect = 9.513e-41 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +IK AYD N L NLL+DP F + + Q A R VV + +G+ TPG SSS+
Sbjct: 363 CIIRAQFLQKIKDAYDNNPGLQNLLLDPYFKNIVTEYQDALRDVVATGVQNGVPTPGFSSSI 424
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAM (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gnd PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.513e-41 Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
+K + +++E++ F +WN GEL S+LIEIT LV+K+LD G KGTGKWT A +L + I S+ ARF+S +KEERV A+K G +++ DK+ ++ +R+ALY SKICSYAQG +R S + W+LKLG+LA
Sbjct: 203 MKELLGMSHEDIAQTFKDWNAGELESYLIEITGDIFMKLDENKEA-LVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKELN----GPKASFDGDKKDFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGDLA 356 HSP 2 Score: 66.2402 bits (160), Expect = 9.513e-41 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +IK AYD N L NLL+DP F + + Q A R VV + +G+ TPG SSS+
Sbjct: 363 CIIRAQFLQKIKDAYDNNPGLQNLLLDPYFKNIVTEYQDALRDVVATGVQNGVPTPGFSSSI 424
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_STAAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Staphylococcus aureus (strain COL) GN=gnd PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 9.513e-41 Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
+K + +++E++ F +WN GEL S+LIEIT LV+K+LD G KGTGKWT A +L + I S+ ARF+S +KEERV A+K G +++ DK+ ++ +R+ALY SKICSYAQG +R S + W+LKLG+LA
Sbjct: 203 MKELLGMSHEDIAQTFKDWNAGELESYLIEITGDIFMKLDENKEA-LVEKILDTAGQKGTGKWTSINALELGIPLTIITESVFARFISSIKEERVNASKELN----GPKASFDGDKKDFLEKIRKALYMSKICSYAQGFAQMRKASEDNEWNLKLGDLA 356 HSP 2 Score: 66.2402 bits (160), Expect = 9.513e-41 Identity = 32/62 (51.61%), Postives = 40/62 (64.52%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +IK AYD N L NLL+DP F + + Q A R VV + +G+ TPG SSS+
Sbjct: 363 CIIRAQFLQKIKDAYDNNPGLQNLLLDPYFKNIVTEYQDALRDVVATGVQNGVPTPGFSSSI 424
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_SHISO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella sonnei GN=gnd PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.106e-40 Identity = 78/165 (47.27%), Postives = 97/165 (58.79%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG 497
LK L+NEEL FTEWN GEL S+LI+IT YLVD +LD+ KGTGKWT Q A DL I S+ AR++S LK++RV A+KV G Q+ A DK + I+ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G
Sbjct: 193 LKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGN-YLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLS----GPQAQSAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG 352 HSP 2 Score: 51.6026 bits (122), Expect = 2.106e-40 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +I AY N +ANLL+ P F + D Q A R VV A+ +GI P ++++
Sbjct: 353 CIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAV 414
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIFL (6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella flexneri GN=gnd PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.742e-40 Identity = 78/165 (47.27%), Postives = 96/165 (58.18%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG 497
LK L+NEEL FTEWN GEL S+LI+IT YLVD +LD+ KGTGKWT Q A DL I S+ AR++S LK++RV A+KV G Q+ A DK + I+ VR ALY KI SYAQG + +RA S E WDL GE+A+ G
Sbjct: 204 LKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGN-YLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLS----GPQAQSAGDKAEFIEKVRSALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG 363 HSP 2 Score: 51.6026 bits (122), Expect = 2.742e-40 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +I AY N +ANLL+ P F + D Q A R VV A+ +GI P ++++
Sbjct: 364 CIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAV 425
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIDY (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella dysenteriae GN=gnd PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.743e-40 Identity = 78/165 (47.27%), Postives = 97/165 (58.79%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG 497
LK L+NEEL FTEWN GEL S+LI+IT YLVD +LD+ KGTGKWT Q A DL I S+ AR++S LK++RV A+KV G Q+ A DK + I+ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G
Sbjct: 193 LKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGN-YLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLS----GPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG 352 HSP 2 Score: 51.6026 bits (122), Expect = 2.743e-40 Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +I AY N +ANLL+ P F + D Q A R VV A+ +GI P ++++
Sbjct: 353 CIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAV 414
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLM (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gnd PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 3.572e-40 Identity = 75/160 (46.88%), Postives = 101/160 (63.12%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELAR 482
LK + L+N E+Q +F EWN+GEL S+LIEIT Y+VDK+LDK G KGTGKWT + A DL V P I S+ AR++S K+ERV+A+KV G + + DK+++I+ +R+ALY SKI SYAQG +R S E WDL G +A+
Sbjct: 205 LKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITESVFARYISTYKDERVKASKVLS----GPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQ 360 HSP 2 Score: 48.9062 bits (115), Expect = 3.572e-40 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL I A+D++++L NLL+D F Q A R VV LA+ +G P +S++
Sbjct: 366 CIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAI 427
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_ESCVU (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Escherichia vulneris GN=gnd PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.574e-40 Identity = 80/165 (48.48%), Postives = 98/165 (59.39%), Query Frame = 3
Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG 497
LK L+NEEL FTEWNKGEL S+LI+IT YLVD +LD+ KGTGKWT Q + DL I S+ AR++S LKE+RV A+KV G QS A DK + I+ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G
Sbjct: 193 LKGGLNLSNEELAQTFTEWNKGELSSYLIDITKDIFTKKDEEGK-YLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKEQRVAASKVLS----GPQSQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG 352 HSP 2 Score: 48.1358 bits (113), Expect = 3.574e-40 Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL +I AY +ANLL+ P F + D Q A R VV A+ +GI P +++
Sbjct: 353 CIIRAQFLQKITDAYAETPAIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFGAAV 414
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_BACLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Bacillus licheniformis GN=gntZ PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.654e-40 Identity = 65/150 (43.33%), Postives = 85/150 (56.67%), Query Frame = 3
Query: 30 EELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479
+E+ ++F WN+GEL S+LIEITA L+D +LDKTG KGTGKWT QA D + + I SL AR+LS LK+ER A V + +D+ ID VRQALY K+C+YAQG + S GW L L ++A
Sbjct: 211 DEIADIFDTWNQGELKSYLIEITAEILRKKDERTGAPLIDVILDKTGQKGTGKWTSLQAIDNGIPSSIITESLFARYLSSLKDERTAAENVLAG---PETEERPLDQNVWIDRVRQALYMGKVCAYAQGFAQYKMTSDLNGWHLPLKDIA 357 HSP 2 Score: 68.1662 bits (165), Expect = 4.654e-40 Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 2
Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685
CIIRA FL+ I + YD+ DL+NLLV P+FA+++ + QS R+VVC I+SGIS P +S++L
Sbjct: 364 CIIRAQFLNLISEVYDKQPDLSNLLVAPDFAEKLKEYQSGLRKVVCEGISSGISFPCLSTAL 425 The following BLAST results are available for this feature:
BLAST of CF417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417347 ID=CF417347; Name=CF417347; organism=Citrus sinensis; type=EST; length=686bpback to top |