CF417347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLTR (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia trachomatis GN=gnd PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.896e-31 Identity = 64/159 (40.25%), Postives = 88/159 (55.35%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479 LK+ L+ E++ N+F EWN+ +L S+LI A + +LD G KGTG+W + A V I S+ AR+LS KE R +AA+ F G + + I+DVR+ALYA+KI SYAQG L++ S +KGWDL LGELA Sbjct: 205 LKTRLNLSLEQIGNIFFEWNQTDLNSYLIGAAAAVLIAKDENGNA-IASTILDVAGQKGTGRWVAEDAIKAGVPMSLIIESVLARYLSTWKEVRTKAAQEFP--GIPLLCQPPQEASAFIEDVREALYAAKIISYAQGFMLLKQVSQDKGWDLNLGELA 360 HSP 2 Score: 50.0618 bits (118), Expect = 1.896e-31 Identity = 22/62 (35.48%), Postives = 41/62 (66.13%), Query Frame = 2 Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685 CII++ FLD+I + ++ + + +L++ F K + D ++ +RR V AI SG++ P +SS+L Sbjct: 367 CIIQSAFLDKIHQGFENSPEAHSLILQDYFKKVLFDSETGFRRAVLHAIGSGVAIPCLSSAL 428
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_CITDI (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter diversus GN=gnd PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.161e-31 Identity = 81/186 (43.55%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG--VALSVLCSLTESRRHTIGM 554 LK L+NEEL FTEWNKGEL S+LI+IT YLVD +LD+ KGTGKWT Q + DL I S+ AR++S LKE+RV A+KV G ++ A DK + I+ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G + L +T++ G+ Sbjct: 193 LKGGLNLSNEELAETFTEWNKGELNSYLIDITKDIFTKKDEEGK-YLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKEQRVAASKVLS----GPKAQLAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENAGI 373
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_KLETE (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella terrigena GN=gnd PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.128e-31 Identity = 80/186 (43.01%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG--VALSVLCSLTESRRHTIGM 554 LK L+NEEL FTEWN+GEL S+LI+IT YLVD +LD+ KGTGKWT Q + DL I S+ AR++S LK++RV A+KV G Q+ A DK + I+ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G + L +T++ G+ Sbjct: 193 LKGGLALSNEELATTFTEWNQGELSSYLIDITKDIFTKKDEEGK-YLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKDQRVAASKVLT----GPQAQPASDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASNEYSWDLNYGEIAKIFRAGCIIRAQFLQKITDAYEENAGI 373
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_AGGAC (6-phosphogluconate dehydrogenase, decarboxylating OS=Aggregatibacter actinomycetemcomitans GN=gnd PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.244e-31 Identity = 69/159 (43.40%), Postives = 87/159 (54.72%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479 LK L+++ELQ F EW EL S+LI+ITA LVDKVLD G KGTGKWT A D + I S+ AR +S K++RV A+K+F V+ DK+ I+ VR+AL ASKI SYAQG LIR S W++ G A Sbjct: 206 LKEGVGLSDDELQATFNEWRNTELDSYLIDITADILGYKDADGSR-LVDKVLDTAGQKGTGKWTGINALDFGIPLTLITESVFARCVSAFKDQRVAASKLFHKTIGKVEG----DKKVWIEAVRKALLASKIISYAQGFMLIREASEHFNWNINYGNTA 359 HSP 2 Score: 47.7506 bits (112), Expect = 9.244e-31 Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 2 Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685 CIIR+ FL I+ AY+ N DL L D F + + S WR+VV +I GI P M+S++ Sbjct: 366 CIIRSRFLGNIRDAYEANPDLIFLGSDSYFKGILENAMSDWRKVVAKSIEVGIPMPCMASAI 427
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPN (6-phosphogluconate dehydrogenase, decarboxylating OS=Klebsiella pneumoniae GN=gnd PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.495e-30 Identity = 79/186 (42.47%), Postives = 104/186 (55.91%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG--VALSVLCSLTESRRHTIGM 554 LK L+NEEL FTEWN+GEL S+LI+IT YLVD +LD+ KGTGKWT Q + DL I S+ AR++S LK++RV A+KV G Q+ DK I+ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G + L +T++ G+ Sbjct: 204 LKGGLALSNEELAQTFTEWNEGELSSYLIDITKDIFTKKDEEGK-YLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKDQRVAASKVLS----GPQAQPVGDKAGFIEKVRRALYLGKIVSYAQGFSQLRAASDEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAQNAGI 384
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPL (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella planticola GN=gnd PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30 Identity = 77/186 (41.40%), Postives = 106/186 (56.99%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG--VALSVLCSLTESRRHTIGM 554 LK L+NEEL FT+WN+GEL S+LI+IT YLVD +LD+ KGTGKWT Q + DL I S+ AR++S LK++RV A+KV G ++ A DK + ++ VR+ALY KI SYAQG + +RA S E WDL GE+A+ G + L +T++ G+ Sbjct: 193 LKGGLALSNEELATTFTKWNEGELSSYLIDITKDIFTKKDEEGK-YLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFARYISSLKDQRVAASKVLT----GPKAQPAGDKAEFVEKVRRALYLGKIVSYAQGFSQLRAASNEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYEQNAGI 373
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_HAEIN (6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus influenzae GN=gnd PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.295e-29 Identity = 65/153 (42.48%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 21 LTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479 L+ EE+Q +F EW EL S+LI+IT LV+K+LD G KGTGKWT A D + I S+ AR +S K++RV A ++F V+ DK+ I+ VR+AL ASKI SYAQG LIR S + GWD+ G A Sbjct: 212 LSYEEMQAIFAEWKNTELDSYLIDITTDILGYKDASGEP-LVEKILDTAGQKGTGKWTGINALDFGIPLTLITESVFARCVSSFKDQRVAANQLFGKTITPVEG----DKKVWIEAVRKALLASKIISYAQGFMLIREASEQFGWDINYGATA 359 HSP 2 Score: 45.4394 bits (106), Expect = 1.295e-29 Identity = 25/62 (40.32%), Postives = 36/62 (58.06%), Query Frame = 2 Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685 CIIR+ FL I+ AY+ N +L L D F + + S WR+VV +I GI P M+S++ Sbjct: 366 CIIRSRFLGNIRDAYEANPNLVFLGSDSYFKGILENALSDWRKVVAKSIEVGIPMPCMASAI 427
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_PIG (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Sus scrofa GN=PGD PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.706e-29 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 138 YLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQ-AVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGW 455 +L+ K+ D G KGTGKWT A + V I ++ AR LS LK+ERV+A+K K G Q Q + DK+ ++D+R+ALYASKI SY QG L+R + E GW Sbjct: 17 HLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSLKDERVQASKKLK----GPQKIQFSGDKKSFLEDIRKALYASKIISYTQGFMLLRQAAAEFGW 119 HSP 2 Score: 61.6178 bits (148), Expect = 1.706e-29 Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 2 Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685 CIIR+VFL +IK A+DRN L NLL+D F + D Q +WRR V + +GI P +++L Sbjct: 133 CIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVEDCQDSWRRAVSTGVQTGIPMPCFTTAL 194
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLMU (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia muridarum GN=gnd PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.722e-29 Identity = 64/159 (40.25%), Postives = 89/159 (55.97%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELA 479 LKS L+ E++ N+F EWN+ +L S+L+ +A + +LD G KGTG+W + A V I S+ AR+LS KE R +AA+ F Q +Q + LI+D R+ALYA+KI SYAQG L++ S E+ WDL LGELA Sbjct: 204 LKSRLDLSLEQIGNIFFEWNQTDLNSYLMGASAAVLTAKDENGVA-VASTILDVAGQKGTGRWVAEDAIKAGVPMSLIIESVLARYLSAWKEVRRQAAREFPVASLLYQPSQ--EASVLIEDAREALYAAKIISYAQGFMLLKQISEERNWDLNLGELA 359 HSP 2 Score: 43.5134 bits (101), Expect = 3.722e-29 Identity = 17/62 (27.42%), Postives = 40/62 (64.52%), Query Frame = 2 Query: 500 CIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVDRQSAWRRVVCLAINSGISTPGMSSSL 685 CII++ FLD+I + ++ D +L++ F +++ ++ +RR + A+ +G++ P ++S+L Sbjct: 366 CIIQSAFLDKIHQGFESCPDAHSLMLQDYFKNVLLNSETGFRRAILHAVGAGVAIPCLASAL 427
BLAST of CF417347 vs. ExPASy Swiss-Prot
Match: 6PGD9_ECOLX (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli GN=gnd PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 76/186 (40.86%), Postives = 103/186 (55.38%), Query Frame = 3 Query: 3 LKSVGKLTNEELQNVFTEWNKGELLSFLIEITAXXXXXXXXXXXXYLVDKVLDKTGMKGTGKWTVQQAADLSVAAPTIASSLDARFLSGLKEERVEAAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARDLXRG--VALSVLCSLTESRRHTIGM 554 LK L+NEEL FTEWN+GEL S+L +IT YLVD +LD+ KGTGKWT Q + DL I S+ R++S LK++RV A+KV G Q+ A DK + I+ VR+ALY KI SYAQG + +RA S E W+L E+A+ G + L +T++ G+ Sbjct: 204 LKGGLTLSNEELAQTFTEWNEGELSSYLYDITKDIFTKKDEEGK-YLVDVILDEAANKGTGKWTSQSSLDLGEPLSLITESVFPRYISSLKDQRVAASKVLS----GPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYNWELNYAEIAKIFRAGCIIRAQFLQKITDAYAQNAGI 384 The following BLAST results are available for this feature:
BLAST of CF417347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417347 ID=CF417347; Name=CF417347; organism=Citrus sinensis; type=EST; length=686bpback to top |