CF417381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_CAEEL (Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.368e-27 Identity = 45/112 (40.18%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD FSPEGRL+QVEYA+EA+ ++IGI + +GV+L EK+ TSKL+ + + EK+ K+D H+ AG+++D+ L+ A+++AQ + + Y + VE + QS+ + Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLM-VNDAIEKISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVAN 118 HSP 2 Score: 46.595 bits (109), Expect = 2.368e-27 Identity = 26/73 (35.62%), Postives = 40/73 (54.79%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGV+ LFAG D+ G +L+ DPSG + K LK+ Y D ++ +E +++AL +L + M Sbjct: 134 RPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAILKQVM 205
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.372e-27 Identity = 41/119 (34.45%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 +Y T FSP G+L Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L S +K+ + ++ +G+ D +L+ +R QA++Y Y+EP+PV QLV+ Q +T Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFT 122 HSP 2 Score: 58.9214 bits (141), Expect = 2.372e-27 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG+RPFGVS L AG+D G QLY DPSG+Y WK + L++ Y +D+ ++A+ A+ L + Sbjct: 123 QSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKE 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.372e-27 Identity = 41/119 (34.45%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 +Y T FSP G+L Q+E+A+ A+G+ +++GI + +GVV+ EKK+ S +L S +K+ + ++ +G+ D +L+ +R QA++Y Y+EP+PV QLV+ Q +T Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPS-ILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFT 122 HSP 2 Score: 58.9214 bits (141), Expect = 2.372e-27 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q GG+RPFGVS L AG+D G QLY DPSG+Y WK + L++ Y +D+ ++A+ A+ L + Sbjct: 123 QSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKE 197
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27 Identity = 61/146 (41.78%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPPLWCFISFCRVGQKLWLPTLHE 441 YD T+FSP+GRL+QV YA EA+ +A+G+ +GVVL EK++TS+L++ S EK+++IDDH+A A +GI++DA +L+N AR++AQ + Y EP P+ +V+ +CD KQ +T P + V +K P L+E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPE-SYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK---PELYE 151 HSP 2 Score: 67.3958 bits (163), Expect = 7.954e-11 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 Q+GG+RPFG + L AG ++ +LY +DPSG Y WK +I ++ YKDD+S EEA++LA+ L+KTM Sbjct: 127 QYGGVRPFGAALLMAGVNEKP--ELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM 202
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.083e-27 Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+G L+QVEYA EA+ +A+G+ K+ VVL EKK +KL Q + K+ +D++V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKL-QDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYT 119 HSP 2 Score: 46.9802 bits (110), Expect = 3.083e-27 Identity = 25/76 (32.89%), Postives = 37/76 (48.68%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVL 580 Q G RPFG+S L G+D + +LY +DPSG Y WK L++ Y D+ + ++L +K L Sbjct: 120 QSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKAL 195
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.084e-27 Identity = 49/118 (41.53%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+G L+QVEYA EA+ +A+G+ K+ VVL EKK +KL Q + K+ +D++V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YT Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKL-QDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYT 119 HSP 2 Score: 46.9802 bits (110), Expect = 3.084e-27 Identity = 25/76 (32.89%), Postives = 37/76 (48.68%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVL 580 Q G RPFG+S L G+D + +LY +DPSG Y WK L++ Y D+ + ++L +K L Sbjct: 120 QSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKAL 195
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.014e-27 Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYTPVWRSPP 378 YD T+FSP+G L+QVEYA EA+ +A+G+ KD VVL EKK +KL Q + K+ +DD+V A AG+ +DA I+IN ARV+ Q + ++P+ VE + + + KQ YT R P Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKL-QDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRP 126 HSP 2 Score: 41.5874 bits (96), Expect = 4.014e-27 Identity = 22/71 (30.99%), Postives = 35/71 (49.30%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREE--AVQLALKVL 580 RPFG+S L G+D + +LY +DPSG Y WK +++Y D+ + ++L +K L Sbjct: 125 RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKAL 195
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 4.015e-27 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 7 DSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 D FS EGRL+QVEYA EA+ + IGI +K+GVVL EK+++S L+ S S EK+ +IDDH+ AV+G+ +DA LI+ AR++AQ + + Y EP+ VE + Q++ D Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGS-SIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISD 118 HSP 2 Score: 41.2022 bits (95), Expect = 4.015e-27 Identity = 26/73 (35.62%), Postives = 37/73 (50.68%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGV+ L AG D+ G +L+ +DPSG + + SIL + Y ++ EA LAL L + M Sbjct: 135 RPFGVALLIAGVDET-GPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKYNKSMTLREAEILALSTLKQVM 206
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.221e-27 Identity = 45/118 (38.14%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD ++FSP+GRL QVEY EA+ +AI + + +V+ E+K KL Q ++ +K+ +D+HV A AG+ +DA ILI+ ARV+AQ + +P+ +E L + + +Q YT Sbjct: 4 YDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKL-QNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYT 120 HSP 2 Score: 55.8398 bits (133), Expect = 5.221e-27 Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 +Q K T Q GG+RPFGVS L AG+D ++Y ++P+G Y WK L++++K+ +SR+E + LA+ L Sbjct: 115 VQQKYT-QSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSL 195
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.798e-27 Identity = 48/118 (40.68%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD +IFSP+G ++QVEYA+EA+ A+G+ K+ VVL E++ T KL T + K+ KID HV + +G+ +D+ ILI ARV+AQ + ++P+ VE L + + +Q YT Sbjct: 4 YDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYT 121 HSP 2 Score: 45.4394 bits (106), Expect = 6.798e-27 Identity = 29/85 (34.12%), Postives = 46/85 (54.12%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWD-KNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDY---KDDISREEAVQLALKVL 580 +Q + T Q GG+RPFGVS L AG+D ++ +LY ++PSG Y W L+++Y + + EE V+L ++ L Sbjct: 116 VQQRYT-QSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSL 199 The following BLAST results are available for this feature:
BLAST of CF417381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417381 ID=CF417381; Name=CF417381; organism=Citrus sinensis; type=EST; length=681bpback to top |