CF417381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.006e-35 Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD 118 HSP 2 Score: 48.9062 bits (115), Expect = 1.006e-35 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGVS L AG D+N G LY +DPSG + S L++ + D+S +EA +A+ +L + M Sbjct: 133 RPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSILKQVM 204
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.309e-35 Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD TIFSPEG++YQVEYA EA+ +G+ K GVVL EK+ S L +S S EK+Y ID+HVA + +G+++DA ILI+ AR A + + Y EP+ VE L +++C+ KQ YT Sbjct: 9 YDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSS-SLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYT 125 HSP 2 Score: 60.8474 bits (146), Expect = 1.309e-35 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 QFGG RPFGV+ L AG D+ +G +LY +DPSG Y G+ L+++YK D+ E ++LALK L+ + Sbjct: 126 QFGGARPFGVALLIAGVDR-HGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAV 202
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.310e-35 Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +IDDH+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD 118 HSP 2 Score: 48.521 bits (114), Expect = 1.310e-35 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGVS L AG D+N G LY +DPSG + S L++ + DI+ +EA +A+ +L + M Sbjct: 133 RPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSILKQVM 204
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.706e-35 Identity = 59/112 (52.68%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD FSPEGRL+QVEYA+EAI +AIG+ +KDGVVL EK+VTS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q++CD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICD 118 HSP 2 Score: 48.9062 bits (115), Expect = 1.706e-35 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGVS L AG D+N G LY +DPSG + S L++ Y +++ +EA +AL +L + M Sbjct: 133 RPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKELTLQEAETIALSILKQVM 204
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.219e-35 Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD TIFSPEGRLYQVEYA EA+ +A+GI DGVVL ++++TSKL+ S S EK+++IDDH+ A +G+++DA +LI+ AR++AQ +Y E + VE L + +CD KQ YT Sbjct: 10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVS-SIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYT 126 HSP 2 Score: 46.2098 bits (108), Expect = 2.219e-35 Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKT 589 Q GG RPFG++ L G D+ + +L+ +DPSG +K +L+ Y +++ E ++LAL LSKT Sbjct: 127 QHGGARPFGLALLITGIDR-HSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKT 202
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.222e-35 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD TIFSP+G LYQV+YA EA+ +AIGI SK VV+ EK+ LL S EK++ IDDHV C+ AG+ SD +LI+ AR A ++ Y EP+ ++ L +S+ D KQ YT Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVD-SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYT 126 HSP 2 Score: 60.8474 bits (146), Expect = 2.222e-35 Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 Q GG+RPFGV+ + AG DK+ +L+M++PSG Y ++ L+++YK+D++ EE + LALK LS T+ Sbjct: 127 QHGGVRPFGVALVIAGIDKSVP-KLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATL 203
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 3.771e-35 Identity = 58/112 (51.79%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD FSPEGRL+QVEYA+EAI +AIG+ +K+GVVL EK++TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + ++Y EPM VE Q+LCD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD 118 HSP 2 Score: 48.9062 bits (115), Expect = 3.771e-35 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGVS L AG D+N G LY +DPSG + S L++ + D++ +EA +AL +L + M Sbjct: 133 RPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVM 204
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.397e-34 Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCD 339 YD FSPEGRL+QVEYA+EAI +AIG+ +KD VVL EK++TS L++ S S EK+++ID H+ CA++G+ +DA +I ARVQ Q + + Y EP +E QS+CD Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME-SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICD 118 HSP 2 Score: 49.6766 bits (117), Expect = 2.397e-34 Identity = 30/73 (41.10%), Postives = 42/73 (57.53%), Query Frame = 2 Query: 374 RPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 RPFGV+ L AG D+ +G QLY S+PSG Y ++ S L +++ D++ EEA L LKVL + M Sbjct: 136 RPFGVALLIAGIDE-HGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFHKDMTLEEAEVLILKVLRQVM 207
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.071e-34 Identity = 56/118 (47.46%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRL+QVEYA EA+ +A+GI KDGV L+ EKKV S+L++ TS EK+ IDD VA +G+++DA +LI+ AR+ Q+ Y M +E LV+ + D Q YT Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVE-KTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYT 124 HSP 2 Score: 56.225 bits (134), Expect = 4.071e-34 Identity = 26/83 (31.33%), Postives = 48/83 (57.83%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTMGQHQS 607 Q+GG+RP+GVS +FAG D + G +L+ DP+G +K + L+++YK+++S +EA+++ + L + S Sbjct: 125 QYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSEDEAIRMGIAALKSAVADESS 206
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 8.977e-34 Identity = 53/119 (44.54%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYAMEA+ +A+G+ D VVL EKK T KL Q S S K+ +DDH+A A AG+ +DA +L+N AR++ Q + ++P+ VE + + + +Q YT Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKL-QDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120 HSP 2 Score: 56.225 bits (134), Expect = 8.977e-34 Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 +Q K T Q GG+RPFG+S L G+D + G LY +DPSG + WK L+++YK + S +E V+LA++ L Sbjct: 115 LQQKYT-QSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYK-ETSGQETVKLAIRAL 194 The following BLAST results are available for this feature:
BLAST of CF417381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417381 ID=CF417381; Name=CF417381; organism=Citrus sinensis; type=EST; length=681bpback to top |