CF417381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.170e-33 Identity = 55/118 (46.61%), Postives = 87/118 (73.73%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK+++ID+H+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YT Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYT 123 HSP 2 Score: 46.9802 bits (110), Expect = 1.170e-33 Identity = 24/76 (31.58%), Postives = 41/76 (53.95%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q+GG+RP+G + L AG D N +L+ +DPSG +K + + DY++D++ + A+ L + L K Sbjct: 124 QYGGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYK 198
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.583e-33 Identity = 54/118 (45.76%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD TIFSPEG LYQV YA EA+ +++GI + +GVV+ EK+ L+ +K+YKIDDH+ A AG+ D ILI+ ARV R+ Y EP PVE + + + D KQ YT Sbjct: 12 YDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDID-DIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYT 128 HSP 2 Score: 58.5362 bits (140), Expect = 2.583e-33 Identity = 28/74 (37.84%), Postives = 44/74 (59.46%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 Q GG+RPFGV+ +FAG + + ++Y +DP G Y +K + ++ Y+ D+S EEA +LALK+L Sbjct: 129 QHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKIL 202
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.367e-33 Identity = 56/118 (47.46%), Postives = 87/118 (73.73%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y EP+ VE + + +CD KQ YT Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYT 125 HSP 2 Score: 43.8986 bits (102), Expect = 3.367e-33 Identity = 22/74 (29.73%), Postives = 39/74 (52.70%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 Q+GG+RP+G + L AG D N +L+ +DPSG +K + + +Y+ D++ + A+ L + L Sbjct: 126 QYGGVRPYGTALLIAGVDDNLP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDAL 198
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.388e-33 Identity = 53/118 (44.92%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD TIFSP+G LYQV+YA EA+ + +G+ +K+ VV++GEKK S+LL S EK++ +DDHV C+ AG+ SD ILI+ AR + ++ Y EP+ ++ L + + D KQ YT Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVD-SIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYT 126 HSP 2 Score: 53.1434 bits (126), Expect = 4.388e-33 Identity = 27/78 (34.62%), Postives = 45/78 (57.69%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 Q GG+RPFGV+ + G D+ +L+M++PSG + ++ L+++YK+D+S EE + LAL L T+ Sbjct: 127 QHGGVRPFGVALIVGGVDRGVT-KLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSVEETILLALNALKVTL 203
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.711e-33 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T+KL Q + S K+ +DDH+A A AG+ +DA +LIN ARV+ Q + ++P+ VE + + + +Q YT Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKL-QDTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120 HSP 2 Score: 53.5286 bits (127), Expect = 5.711e-33 Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 +Q K T Q GG+RPFG+S L G+D G LY +DPSG + WK L++++K + S +E V+LA++ L Sbjct: 115 LQQKYT-QSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFK-ETSGQETVKLAIRAL 194
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 7.439e-33 Identity = 55/118 (46.61%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y E + VE + + +CD KQ YT Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYT 123 HSP 2 Score: 46.2098 bits (108), Expect = 7.439e-33 Identity = 25/76 (32.89%), Postives = 40/76 (52.63%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q+GG+RP+G + L AG D +L+ +DPSG +K + + DYK+D++ E A+ L + L K Sbjct: 124 QYGGVRPYGTALLIAGVDDKRP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYK 198
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.441e-33 Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD TIFSP+G LYQV+YA EA+ + +G+ +K GVVL+ EK+ ++LL EK++ +DDHV C AG+ SD ILI+ AR QA ++ Y EP+ +E L + + D KQ YT Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVD-GIEKIFMLDDHVGCTFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYT 126 HSP 2 Score: 50.447 bits (119), Expect = 7.441e-33 Identity = 25/78 (32.05%), Postives = 42/78 (53.85%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSKTM 592 Q GG+RPFGV+ + G DK +L M++PSG + + L+++YK+D+ + + LAL+ L T+ Sbjct: 127 QHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKEDLDIQSTILLALRALMATL 204
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 9.687e-33 Identity = 55/118 (46.61%), Postives = 86/118 (72.88%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRL+QVEYA EA+ +A+GI + DGVVL+ +K++TS+L++ + S EK+++IDDH+ A +G+++DA L++ ARV+AQ +Y E + VE + + +CD KQ YT Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVE-AESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYT 125 HSP 2 Score: 46.2098 bits (108), Expect = 9.687e-33 Identity = 24/76 (31.58%), Postives = 41/76 (53.95%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVLSK 586 Q+GG+RP+G + L AG D N +L+ +DPSG +K + + DY++D++ + A+ L + L K Sbjct: 126 QYGGVRPYGTALLIAGVDDNKP-RLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYK 200
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.262e-32 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 4 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 YD T+FSP+GRLYQVEYA EA+ +A+GI DG+VL+ +K+V SKLL+ S S EK++KID+H+ A +G++ DA L++ ARV++Q +Y E + VE L + LCD Q YT Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPS-SIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYT 125 HSP 2 Score: 45.0542 bits (105), Expect = 1.262e-32 Identity = 24/74 (32.43%), Postives = 37/74 (50.00%), Query Frame = 2 Query: 359 QFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 QFGG RP+G + L AG F+L+ +DPSG +K + +++Y + S +A+ L LK L Sbjct: 126 QFGGARPYGTALLIAGISDGQ-FRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKAL 198
BLAST of CF417381 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.787e-32 Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 1 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTYAYQEPMPVEQLVQSLCDTKQGYT 357 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D VVL EKK T K LQ S S K+ +D+H+A A AG+ +DA +LIN AR++ Q + ++P+ VE + + + +Q YT Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPK-LQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYT 120 HSP 2 Score: 52.7582 bits (125), Expect = 2.787e-32 Identity = 30/82 (36.59%), Postives = 45/82 (54.88%), Query Frame = 2 Query: 338 IQSKVTPQFGGLRPFGVSFLFAGWDKNYGF-QLYMSDPSGNYGGWKXXXXXXXXXXXXSILKQDYKDDISREEAVQLALKVL 580 +Q K T Q GG+RPFG+S L G+D LY +DPSG + WK L+++YK+ S +E ++LA++ L Sbjct: 115 LQQKYT-QSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES-SGQETIKLAIRAL 194 The following BLAST results are available for this feature:
BLAST of CF417381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417381 ID=CF417381; Name=CF417381; organism=Citrus sinensis; type=EST; length=681bpback to top |