CF417382 | Citrus Genome Database

Overview


Name	CF417382
Unique Name	CF417382
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	714

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig10200	contig	Csv1_Contig10200:1258..1972.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.645e-101
Identity = 123/143 (86.01%), Postives = 134/143 (93.71%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            T+KG++RKWISRFEVWPYLETY EDVA E+A E+Q  PDLIIGNYSDGN+VASLLAH+LG+TQCTIAHALEKTKYP+SDIY K  DD+YHFSCQFTADLIAMN +DFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG
Sbjct:  368 TDKGILRKWISRFEVWPYLETYAEDVAHELAGEMQATPDLIIGNYSDGNLVASLLAHRLGITQCTIAHALEKTKYPNSDIYLKKFDDQYHFSCQFTADLIAMNQSDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 510

HSP 2 Score: 127.487 bits (319), Expect = 1.645e-101
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADMSIY+PY E+++RL + H EIEELLYS VEN+EH  VLKDRNKPI+F+MARLDRVKN  GL
Sbjct:  510 GIDVFDPKFNIVSPGADMSIYYPYFEQEKRLTALHAEIEELLYSSVENEEHKFVLKDRNKPIIFSMARLDRVKNMTGL 587

HSP 3 Score: 22.7126 bits (47), Expect = 1.645e-101
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3

Query:  645 KELTGLVEWYGK 680
            K +TGLVE YGK
Sbjct:  582 KNMTGLVELYGK 593

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.143e-101
Identity = 122/143 (85.31%), Postives = 130/143 (90.91%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            TE G+VRKWISRFEVWPYLE YT+DVA EIA ELQ  PDLIIGNYSDGN+VA LLAHKLGVT CTIAHALEKTKYP+SD+YWK  +D YHFSCQFTADLIAMNH DFIITSTFQEIAG+KDTVGQYESH AFT+PGLYRVVHG
Sbjct:  374 TEDGIVRKWISRFEVWPYLEAYTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHG 516

HSP 2 Score: 129.028 bits (323), Expect = 2.143e-101
Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADMSIYFPYTE+++RL S H EIEELL+SDVEN EH  VLKD+ KPI+F+MARLDRVKN  GL
Sbjct:  516 GIDVFDPKFNIVSPGADMSIYFPYTEQQKRLTSLHTEIEELLFSDVENAEHKFVLKDKKKPIIFSMARLDRVKNMTGL 593

HSP 3 Score: 21.9422 bits (45), Expect = 2.143e-101
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 3

Query:  645 KELTGLVEWYGK 680
            K +TGLVE YG+
Sbjct:  588 KNMTGLVEMYGR 599

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.405e-101
Identity = 121/143 (84.62%), Postives = 130/143 (90.91%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            TE G+VRKWISRFEVWPYLETYT+DVA EIA ELQ  PDLIIGNYSDGN+VA LLAHK+GVT CTIAHALEKTKYP+SD+YWK  +D YHFSCQFT DLIAMNH DFIITSTFQEIAG+KDTVGQYESH AFT+PGLYRVVHG
Sbjct:  374 TENGIVRKWISRFEVWPYLETYTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHG 516

HSP 2 Score: 128.642 bits (322), Expect = 3.405e-101
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGAD+SIYFPYTE  +RL S HPEIEELLYS  EN EH  VL DRNKPI+F+MARLDRVKN  GL
Sbjct:  516 GIDVFDPKFNIVSPGADLSIYFPYTESHKRLTSLHPEIEELLYSQTENTEHKFVLNDRNKPIIFSMARLDRVKNLTGL 593

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 1.080e-99
Identity = 123/143 (86.01%), Postives = 132/143 (92.31%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            TE G++RKWISRFEVWPYLETY EDVA E+A ELQ  PDLIIGNYSDGN+VASL+AHKLGVTQCTIAHALEKTKYP+SD+YWK  + +YHFSCQFTADLIAMNH DFIITSTFQEIAGSKDTVGQYESHT FTLPGLYRVVHG
Sbjct:  370 TEHGILRKWISRFEVWPYLETYAEDVANEVAGELQATPDLIIGNYSDGNLVASLMAHKLGVTQCTIAHALEKTKYPNSDLYWKKFEKQYHFSCQFTADLIAMNHADFIITSTFQEIAGSKDTVGQYESHTGFTLPGLYRVVHG 512

HSP 2 Score: 120.553 bits (301), Expect = 1.080e-99
Identity = 58/78 (74.36%), Postives = 66/78 (84.62%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADMSIYFPYTE ++RL + HPEIEELLYS  E+ E+   LKD+ KPI+F+MARLDRVKN  GL
Sbjct:  512 GIDVFDPKFNIVSPGADMSIYFPYTEAEKRLTALHPEIEELLYSSAESTEYKFGLKDKTKPIIFSMARLDRVKNMTGL 589

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.839e-99
Identity = 121/143 (84.62%), Postives = 131/143 (91.61%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            TE G+ RKWISRF+VWPYLETYTEDVA E+ +E+Q KPDLIIGNYSDGN+VA+LLAHKLGVTQCTIAHALEKTKYP+SDIY    D +YHFSCQFTADLIAMNHTDFIITSTFQEIAGSKD+VGQYESH AFTLP LYRVVHG
Sbjct:  366 TENGI-RKWISRFDVWPYLETYTEDVANELMREMQTKPDLIIGNYSDGNLVATLLAHKLGVTQCTIAHALEKTKYPNSDIYLDKFDSQYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDSVGQYESHIAFTLPDLYRVVHG 507

HSP 2 Score: 131.724 bits (330), Expect = 1.839e-99
Identity = 63/78 (80.77%), Postives = 69/78 (88.46%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADM++YFPYTE  +RL +FH EIEELLYSDVEN EH  VLKDRNKPI+F+MARLDRVKN  GL
Sbjct:  507 GIDVFDPKFNIVSPGADMTVYFPYTETDKRLTAFHSEIEELLYSDVENDEHKFVLKDRNKPIIFSMARLDRVKNMTGL 584

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.936e-99
Identity = 121/143 (84.62%), Postives = 130/143 (90.91%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            TE G VRKWISRFEVWPYLETYT+DVA EI+ ELQ  PDLIIGNYSDGN+VA LLAHKLGVT CTIAHALEKTKYP+SD+YWK  +D YHFSCQFTADLIAMNH DFIITSTFQEIAG+K+TVGQYESH AFT+PGLYRVVHG
Sbjct:  374 TENGTVRKWISRFEVWPYLETYTDDVAHEISGELQATPDLIIGNYSDGNLVACLLAHKLGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTADLIAMNHADFIITSTFQEIAGNKETVGQYESHMAFTMPGLYRVVHG 516

HSP 2 Score: 124.02 bits (310), Expect = 1.936e-99
Identity = 60/78 (76.92%), Postives = 67/78 (85.90%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADMSIYFP+TE ++RL S H EIEELL+SDVEN EH  VLKD+ KPI+F+MARLD VKN  GL
Sbjct:  516 GIDVFDPKFNIVSPGADMSIYFPFTESQKRLTSLHLEIEELLFSDVENTEHKFVLKDKKKPIIFSMARLDHVKNLTGL 593

HSP 3 Score: 22.3274 bits (46), Expect = 1.936e-99
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 3

Query:  645 KELTGLVEWYGK 680
            K LTGLVE YG+
Sbjct:  588 KNLTGLVELYGR 599

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 8.372e-94
Identity = 119/143 (83.22%), Postives = 134/143 (93.71%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            +EKG++RKWISRF+VWP+LET+ EDVA EIA ELQ  PD IIGNYSDGN+VASLLA+K+GVTQCTIAHALEKTKYPDSDIYWK  +DKYHFSCQFTADLIAMN+ DFIITST+QEIAG+K+T+GQYESHTAFTLPGLYRVVHG
Sbjct:  372 SEKGILRKWISRFDVWPFLETFAEDVASEIAAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTIGQYESHTAFTLPGLYRVVHG 514

HSP 2 Score: 107.457 bits (267), Expect = 8.372e-94
Identity = 50/78 (64.10%), Postives = 64/78 (82.05%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADM+IYFPY+++++RL + H  IE+LLY   +  E++  L DR+KPI+F+MARLDRVKN  GL
Sbjct:  514 GIDVFDPKFNIVSPGADMTIYFPYSDKEKRLTALHSSIEKLLYGTEQTDEYIGSLTDRSKPIIFSMARLDRVKNITGL 591

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 5.383e-93
Identity = 116/143 (81.12%), Postives = 131/143 (91.61%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            TEKG++RKWISRF+VWPYLET+ ED + EI+ ELQG P+LIIGNYSDGN+VASLLA KLGV QC IAHALEKTKYP+SDIYW+N +DKYHFS QFTADLIAMN+ DFIITST+QEIAGSK+ VGQYESHTAFT+PGLYRVVHG
Sbjct:  366 TEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGLYRVVHG 508

HSP 2 Score: 114.005 bits (284), Expect = 5.383e-93
Identity = 53/78 (67.95%), Postives = 67/78 (85.90%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRRLKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADM+IYFPY++++RRL + H  IEELL+S  +N EH+ +L D++KPI+F+MARLDRVKN  GL
Sbjct:  508 GIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEELLFSAEQNDEHVGLLSDQSKPIIFSMARLDRVKNLTGL 585

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 1.195e-92
Identity = 119/143 (83.22%), Postives = 133/143 (93.01%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHG 431
            +EKG++RKWISRF+VWPYLET+TED A EI  ELQG+PDLIIGNYSDGNIVASLL+HK+GVTQC IAHALEKTKYPDSDIYWK  +DKYHFSCQF+ADL+AMNH DFIITST+QEIAG+K+TVGQYESH AFT PGLYRVVHG
Sbjct:  314 SEKGILRKWISRFDVWPYLETFTEDAAGEIIGELQGRPDLIIGNYSDGNIVASLLSHKMGVTQCNIAHALEKTKYPDSDIYWKRFEDKYHFSCQFSADLMAMNHADFIITSTYQEIAGTKNTVGQYESHKAFTFPGLYRVVHG 456

HSP 2 Score: 101.293 bits (251), Expect = 1.195e-92
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 1

Query:  430 GIDVFDPKFNIVSPGADMSIYFPYTEEKRR-LKSFHPEIEELLYSDVENKEHLCVLKDRNKPILFTMARLDRVKN*LGL 663
            GIDVFDPKFNIVSPGADM+IYFP++E+    L S H  IE+LL+   +N+EH+ VL D +KPI+F+MARLDRVKN  GL
Sbjct:  456 GIDVFDPKFNIVSPGADMAIYFPFSEKDVTCLTSLHRLIEQLLFKPEQNEEHIGVLDDTSKPIIFSMARLDRVKNITGL 534

[Close]

BLAST of CF417382 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 285.804 bits (730), Expect = 1.542e-76
Identity = 149/227 (65.64%), Postives = 168/227 (74.01%), Query Frame = 3

Query:    3 TEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGY*CV*SQVQHCISWC*YEHLLPLH*GEEKAEVFPSRD*GVALQRC*E*GTLMCAERPQQAHPVYN-GKIGPCKELTGLVEWYGK 680
            TEKG+VRKWISRFEVWPYLETYTED AVE++KEL GKPDLIIGNYSDGN+VASLLAHKLGVTQCTIAHALEKTKYPDSDIYWK LDDKYHFSCQFTAD+ AMNHTDFIITSTFQEIAGSK+TVGQYESHTAFTLPGLYRVVHG      +              P    + +   F S +    L    E    +C  + ++   ++   ++   K L+GLVEWYGK
Sbjct:  371 TEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHS-EIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGK 596

The following BLAST results are available for this feature:

BLAST of CF417382 vs. ExPASy Swiss-Prot

BLAST of CF417382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23


Match Name	E-value	Identity	Description
SUS1_TULGE	1.645e-101	86.01	Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1	[more]
SUS2_HORVU	2.143e-101	85.31	Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ...	[more]
SUS2_MAIZE	3.405e-101	84.62	Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1	[more]
SUS2_TULGE	1.080e-99	86.01	Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1	[more]
SUS1_HORVU	1.839e-99	84.62	Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ...	[more]
SUS3_ORYSJ	1.936e-99	84.62	Sucrose synthase 3 OS=Oryza sativa subsp. japonica...	[more]
SUS2_PEA	8.372e-94	83.22	Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S...	[more]
SUS2_ARATH	5.383e-93	81.12	Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g...	[more]
SUSY_BETVU	1.195e-92	83.22	Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS...	[more]
SUS1_ARATH	1.542e-76	65.64	Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_115000-312 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_F03 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417382 ID=CF417382; Name=CF417382; organism=Citrus sinensis; type=EST; length=714bp
GAACTGAGAAGGGAGTTGTCCGCAAGTGGATCTCACGATTTGAAGTCTGG
CCTTATCTAGAGACCTACACCGAGGATGTTGCTGTTGAAATTGCCAAAGA
GTTGCAGGGCAAGCCTGATCTAATCATTGGAAACTACAGTGATGGCAACA
TTGTTGCTTCCTTGTTAGCACATAAACTAGGTGTTACCCAGTGTACTATT
GCTCATGCTTTGGAGAAAACAAAATATCCAGATTCTGACATCTACTGGAA
AAATTTGGATGACAAATACCACTTCTCATGCCAATTTACAGCTGATCTTA
TAGCCATGAATCACACTGACTTCATCATCACCAGTACCTTCCAAGAGATT
GCTGGAAGTAAGGACACTGTTGGTCAGTATGAGAGTCACACTGCTTTCAC
TCTTCCTGGACTCTACCGTGTTGTACATGGGTATTGATGTGTTTGATCCC
AAGTTCAACATTGTATCTCCTGGTGCTGATATGAGCATTTACTTCCCCTA
CACTGAGGAGAAGAGAAGGCTGAAGTCTTTCCATCCCGAGATTGAGGAGT
TGCTTTACAGCGATGTTGAGAATAAGGAACACTTATGTGTGCTGAAAGAC
CGCAACAAGCCCATCCTGTTTACAATGGCAAGATTGGACCGTGTAAAGAA
TTGACTGGGCTTGTGGAGTGGTATGGAAAGATGCTAAGCTACGTGAGTTG
GTGACTTAGTCGTA