CF417383

Overview
NameCF417383
Unique NameCF417383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7910 contig Csv1_Contig7910:471..1162. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417383 vs. ExPASy Swiss-Prot
Match: GDL21_ARATH (GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 53/210 (25.24%), Postives = 95/210 (45.24%), Query Frame = 1
Query:   46 TKQLVNGALILITVGGNDFVNNYFLVPYSARSRQFSLPNYVKYVISEYRKLLTRLYDLGATRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNLCPNRAVYAFWDPFHPSERANGFIVQEFMTGSTEYMYPMNLSTIMAL 675
            T Q  + A+ LI +G +D+++     P  + +++ +   +V  VI+  +  +  +Y  G  +       PLGC+PA +   G   +C       A L+N +L+QL+ +L+ +     +   +      N +   + + F T   ACCG G  NG   C+ A N+C     Y F+D  H ++ AN  +         E + P N+  +M L
Sbjct:  159 TNQTRSEAIYLIYIGSDDYLSYAKSNPSPSDTQKQA---FVDQVITTIKAEIKVVYGSGGRKFAFQNLAPLGCLPAVKQASGNVQECVKLPSEMAALHNKKLLQLLVELSRELNGFQYSFYDFFSSIQNRVIKSKTYTFETGNAACCGTGSINGSN-CS-AKNVCAKPEEYIFFDGKHLTQEANLQVGHLMWGADPEVIGPNNIRELMVL 363          
BLAST of CF417383 vs. ExPASy Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 56/208 (26.92%), Postives = 89/208 (42.79%), Query Frame = 1
Query:   61 NGALILITVGGNDFVNNYFLVPYSARSRQFSLPNYVKYVISEYRKLLTRLYDLGATRVLVTGTGPLGCVPAERAMRGRNGQ------CAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQG--PYN-----GLGLCTPASNL------CPNRAVYAFWDPFHPSERANGFIVQEFMTG 627
            +  L +  +G ND    ++            +   V  ++  ++  + RLY  GA    +  TGPLGC+    ++ G +        C +D  +AA L+N QL  L K L  QY +  F  V+   ++ + I N   +GF  S + CCG G  P N     G G    ++        C + + Y  WD  H +E AN F+    +TG
Sbjct:  167 SNGLYMFDIGQNDIAGAFYTKTVD------QVLALVPIILDIFQDGIKRLYAEGARNYWIHNTGPLGCLAQVVSIFGEDKSKLDEFGCVSDHNQAAKLFNLQLHGLFKKLPQQYPNSRFTYVDIFSIKSDLILNHSKYGFDHSIMVCCGTGGPPLNYDDQVGCGKTARSNGTIITAKPCYDSSKYVNWDGIHYTEAANRFVALHILTG 368          
BLAST of CF417383 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 53/220 (24.09%), Postives = 88/220 (40.00%), Query Frame = 1
Query:   67 ALILITVGGNDFVNNYFLVPYSARSRQFSLPNYVKYVISEYRKLLTRLYDLGATRVLVTGTGPLGCVP--------AERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGFTTSKVACCGQGPYNGLGLCTPASNL-------------CPNRAVYAFWDPFHPSERANGFIVQEFMTGS-TEYMYPMNLS 660
            AL    +G ND    +  +  +      ++P+ V    +  +K+    YDLGA    +  TGP+GC+         AE+   G    CA      A  +N +L ++V  L        FV V+   ++Y+  S P   GF    + CCG G      +  P  +              C   +V   WD  H +E AN +   +  TG+ ++   P+N++
Sbjct:  169 ALYTFDIGQNDLTEGFLNL--TVEEVNATVPDLVNSFSANVKKI----YDLGARTFWIHNTGPIGCLSFILTYFPWAEKDSAG----CAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHGFEFPLITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPVPLNMA 378          
The following BLAST results are available for this feature:
BLAST of CF417383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
GDL21_ARATH3.024e-1325.24GDSL esterase/lipase At1g54030 OS=Arabidopsis thal... [more]
GDL49_ARATH6.737e-1326.92GDSL esterase/lipase At3g05180 OS=Arabidopsis thal... [more]
EST_HEVBR3.697e-1124.09Esterase OS=Hevea brasiliensis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-313 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417383 ID=CF417383; Name=CF417383; organism=Citrus sinensis; type=EST; length=692bp
CAAGAATATCAGAACCGGGTTACAGCTTTAATCGGACCGCAGCGGACTAA
GCAACTTGTTAATGGAGCACTCATCCTCATCACTGTCGGTGGCAATGACT
TTGTCAATAACTATTTCTTGGTTCCCTACTCTGCAAGATCTCGTCAGTTT
TCTCTACCGAATTACGTCAAATATGTCATCTCCGAGTACAGAAAACTTTT
AACGAGGCTATACGACCTTGGAGCAACAAGGGTTTTGGTGACCGGAACCG
GGCCGTTGGGGTGTGTTCCGGCAGAGCGAGCTATGCGGGGCAGAAATGGA
CAGTGCGCTGCTGATCTTCAACGAGCTGCCGATTTGTATAATCCTCAACT
TGTTCAATTGGTTAAAGATCTGAATAGTCAATACGGTTCAGAAATCTTTG
TTGCTGTTAATACGGGAAAGATGCAATATAACTTCATCAGTAACCCTCGA
GCGTTCGGATTTACAACATCAAAGGTAGCATGTTGCGGGCAAGGACCATA
CAATGGCCTAGGCTTGTGCACTCCGGCATCCAACTTATGCCCAAATAGAG
CTGTGTATGCATTTTGGGATCCATTTCATCCATCTGAAAGAGCAAATGGA
TTTATTGTTCAAGAATTCATGACTGGTTCGACTGAGTACATGTATCCCAT
GAATCTCAGCACCATCATGGCCTTGGGATTCAAGAACATAAT
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